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L3_122_000G1_scaffold_343

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Displaying items 1-30 of 132 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_122_000G1_scaffold_343_1
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(252..725)
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZHR9_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA36094.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
PTS system sorbose subfamily IIB component family protein
L3_122_000G1_scaffold_343_2
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(797..1216)
DNA (420bp) protein (140aa)
Phosphotransferase system, mannose/fructose-specific component IIA (EC:2.7.1.69)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z8T7_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA36093.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
L3_122_000G1_scaffold_343_3
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(1352..2065)
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R6A4Q6_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA36092.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
transcriptional regulator, GntR family
L3_122_000G1_scaffold_343_4
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

2487..5519
DNA (3033bp) protein (1011aa)
Peptidase M16 inactive domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZNZ9_9ACTN
Peptidase M16 inactive domain protein {ECO:0000313|EMBL:CDA36091.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
Peptidase M16C associated domain-containing protein
L3_122_000G1_scaffold_343_5
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

5904..6500
DNA (597bp) protein (199aa)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
5,10-methenyltetrahydrofolate synthetase (EC:6.3.3.2)
5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZHR5_9ACTN
L3_122_000G1_scaffold_343_6
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(6721..7683)
DNA (963bp) protein (321aa)
Tat pathway signal sequence domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9T1_9ACTN
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:EBA39599.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L3_122_000G1_scaffold_343_7
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(8143..9069)
DNA (927bp) protein (309aa)
Homoserine O-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_00295, ECO:0000256|SAAS:SAAS00084556}; EC=2.3.1.46 {ECO:0000256|HAMAP-Rule:MF_00295, ECO:0000256|SAAS:SAAS00084596};; Homoserine O-transsuccinylase {ECO:0000256|HAMAP-Rule:MF_00295}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Homoserine O-succinyltransferase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9T3_9ACTN
homoserine O-succinyltransferase
L3_122_000G1_scaffold_343_8
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

9242..10258
DNA (1017bp) protein (339aa)
malate dehydrogenase (NAD) (EC:1.1.1.37)
Putative L-lactate dehydrogenase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9T4_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75666.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L3_122_000G1_scaffold_343_9
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(10637..11605)
DNA (969bp) protein (323aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9T5_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA39603.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
sugar isomerase
L3_122_000G1_scaffold_343_10
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(11750..12514)
DNA (765bp) protein (255aa)
UbiC transcription regulator-associated domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9T6_9ACTN
UbiC transcription regulator-associated domain protein {ECO:0000313|EMBL:EBA39604.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
GntR family transcriptional regulator
L3_122_000G1_scaffold_343_11
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(12517..14496)
DNA (1980bp) protein (660aa)
ATP-dependent DNA helicase RecQ (EC:3.6.1.-)
Putative ATP-dependent DNA helicase RecQ n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9T7_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75662.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L3_122_000G1_scaffold_343_12
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(14759..15478)
DNA (720bp) protein (240aa)
UbiC transcription regulator-associated domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9T8_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75735.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
Transcriptional regulators
L3_122_000G1_scaffold_343_13
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(15698..16705)
DNA (1008bp) protein (336aa)
Uncharacterized protein n=2 Tax=Collinsella RepID=R5Z9B5_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75734.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L3_122_000G1_scaffold_343_14
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(16912..17541)
DNA (630bp) protein (210aa)
HAD hydrolase family IA variant 3 n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZI61_9ACTN
HAD hydrolase family IA variant 3 {ECO:0000313|EMBL:CDA36289.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
L3_122_000G1_scaffold_343_15
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(17701..18684)
DNA (984bp) protein (328aa)
SIS domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZBM0_9ACTN
SIS domain protein {ECO:0000313|EMBL:CDA36290.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
Predicted phosphosugar isomerases
L3_122_000G1_scaffold_343_16
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(18884..19717)
DNA (834bp) protein (278aa)
PTS system mannose/fructose/sorbose family IID component n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9U4_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75731.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
PTS system IID component, Man family (TC 4.A.6)
L3_122_000G1_scaffold_343_17
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(19731..20525)
DNA (795bp) protein (265aa)
PTS system sorbose-specific iic component n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9U5_9ACTN
PTS system sorbose-specific iic component {ECO:0000313|EMBL:EBA39613.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC
L3_122_000G1_scaffold_343_18
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(20562..21485)
DNA (924bp) protein (308aa)
Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB (EC:2.7.1.69)
PTS system fructose IIA component n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z9B9_9ACTN
PTS system fructose IIA component {ECO:0000313|EMBL:CDA36293.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
L3_122_000G1_scaffold_343_19
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(21668..22786)
DNA (1119bp) protein (373aa)
Putative membrane protein n=2 Tax=Collinsella RepID=R5ZI65_9ACTN
Putative membrane protein {ECO:0000313|EMBL:CDA36294.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
transporter
L3_122_000G1_scaffold_343_20
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(23139..24131)
DNA (993bp) protein (331aa)
SIS domain protein n=2 Tax=Collinsella RepID=A4E9U8_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75727.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
sugar isomerase (SIS)
L3_122_000G1_scaffold_343_21
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

24337..25059
DNA (723bp) protein (241aa)
UbiC transcription regulator-associated domain protein n=2 Tax=Collinsella RepID=A4E9U9_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75726.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
GntR family transcriptional regulator
L3_122_000G1_scaffold_343_22
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(25107..25688)
DNA (582bp) protein (194aa)
Acetyltransferase, GNAT family n=2 Tax=Collinsella RepID=A4E9V0_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI71766.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
sortase-like acyltransferase
L3_122_000G1_scaffold_343_23
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(25766..26791)
DNA (1026bp) protein (342aa)
Threonine aldolase (EC:4.1.2.5)
Beta-eliminating lyase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9V1_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI71765.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L3_122_000G1_scaffold_343_24
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(26837..27700)
DNA (864bp) protein (288aa)
PAP2 family protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9V2_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI71764.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
PAP2 superfamily protein
L3_122_000G1_scaffold_343_25
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(27757..31389)
DNA (3633bp) protein (1211aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
Transcription-repair-coupling factor n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9V3_9ACTN
transcription-repair coupling factor
L3_122_000G1_scaffold_343_26
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(31510..32175)
DNA (666bp) protein (222aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
DNA-(apurinic or apyrimidinic site) lyase (EC:4.2.99.18 3.2.2.-)
Endonuclease III n=2 Tax=Collinsella RepID=A4E9V4_9ACTN
L3_122_000G1_scaffold_343_27
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(32239..34041)
DNA (1803bp) protein (601aa)
ABC transporter, ATP-binding protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9V5_9ACTN
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EBA39623.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
ABC transporter
L3_122_000G1_scaffold_343_28
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(34167..35522)
DNA (1356bp) protein (452aa)
RmuC domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9V7_9ACTN
RmuC domain protein {ECO:0000313|EMBL:EBA39625.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L3_122_000G1_scaffold_343_29
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(35646..36068)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9V8_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA39626.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
di-heme cytochrome c peroxidase
L3_122_000G1_scaffold_343_30
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(36511..37050)
DNA (540bp) protein (180aa)
Rubrerythrin n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9W1_9ACTN
Rubrerythrin {ECO:0000313|EMBL:EBA39629.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
rubrerythrin
Displaying items 1-30 of 132 in total

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