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L3_122_000G1_scaffold_375

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Displaying items 1-30 of 113 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_122_000G1_scaffold_375_1
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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2..94
DNA (93bp) protein (31aa)
ABC transporter ATP-binding protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZC48_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74929.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L3_122_000G1_scaffold_375_2
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

96..440
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAB1_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA39434.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
L3_122_000G1_scaffold_375_3
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists


808..1233
DNA (426bp) protein (142aa)
50S ribosomal protein L31 n=2 Tax=Collinsella RepID=A4EAB2_9ACTN
50S ribosomal protein L31 {ECO:0000256|HAMAP-Rule:MF_00501, ECO:0000256|SAAS:SAAS00004482}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
LSU ribosomal protein L31P
L3_122_000G1_scaffold_375_4
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

1520..4348
DNA (2829bp) protein (943aa)
Protein translocase subunit SecA n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAB3_9ACTN
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
protein translocase subunit secA
L3_122_000G1_scaffold_375_5
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

4348..5496
DNA (1149bp) protein (383aa)
Peptide chain release factor 2 n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAB5_9ACTN
Peptide chain release factor 2 {ECO:0000256|SAAS:SAAS00090452}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
peptide chain release factor 2 (bRF-2)
L3_122_000G1_scaffold_375_6
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

5663..6553
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAB6_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74924.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L3_122_000G1_scaffold_375_7
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

6762..7592
DNA (831bp) protein (277aa)
Transketolase, N-terminal subunit (EC:2.2.1.1)
Transketolase, thiamine diphosphate binding domain protein n=2 Tax=Collinsella RepID=A4EAB7_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74923.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L3_122_000G1_scaffold_375_8
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

7594..8370
DNA (777bp) protein (259aa)
Transketolase, pyridine binding domain protein n=2 Tax=Collinsella RepID=A4EAB8_9ACTN
Transketolase, pyridine binding domain protein {ECO:0000313|EMBL:EBA39441.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
transketolase central region
L3_122_000G1_scaffold_375_9
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

8822..10042
DNA (1221bp) protein (407aa)
Cell division ATP-binding protein FtsE n=1 Tax=Collinsella sp. CAG:166 RepID=R6A215_9ACTN
Cell division ATP-binding protein FtsE {ECO:0000313|EMBL:CDA35222.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
cell division ATP-binding protein FtsE
L3_122_000G1_scaffold_375_10
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

10029..10949
DNA (921bp) protein (307aa)
Cell division protein FtsX n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAC0_9ACTN
Cell division protein FtsX {ECO:0000256|PIRNR:PIRNR003097}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
cell division protein FtsX
L3_122_000G1_scaffold_375_11
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

11085..13220
DNA (2136bp) protein (712aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
VacB and RNase II family 3'-5' exoribonuclease (EC:3.1.13.1)
Ribonuclease R n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z8L5_9ACTN
L3_122_000G1_scaffold_375_12
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

13398..14003
DNA (606bp) protein (202aa)
Resolvase, N-terminal domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAC2_9ACTN
Resolvase, N-terminal domain protein {ECO:0000313|EMBL:EBA39445.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Site-specific recombinases, DNA invertase Pin homologs
L3_122_000G1_scaffold_375_13
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

14108..14689
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z669_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA35218.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hypothetical protein
L3_122_000G1_scaffold_375_14
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

14894..15745
DNA (852bp) protein (284aa)
Transcriptional regulator RpiR family n=1 Tax=Collinsella sp. CAG:166 RepID=R6A210_9ACTN
Transcriptional regulator RpiR family {ECO:0000313|EMBL:CDA35217.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
RpiR family transcriptional regulator
L3_122_000G1_scaffold_375_15
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

15756..16679
DNA (924bp) protein (308aa)
N-acetylmuramic acid 6-phosphate etherase {ECO:0000256|HAMAP-Rule:MF_00068, ECO:0000256|SAAS:SAAS00085795}; Short=MurNAc-6-P etherase {ECO:0000256|HAMAP-Rule:MF_00068};; EC=4.2.1.126 {ECO:0000256|HAMAP-Rule:MF_00068, ECO:0000256|SAAS:SAAS00085795};; N-acetylmuramic acid 6-phosphate hydrolase {ECO:0000256|HAMAP-Rule:MF_00068}; N-acetylmuramic acid 6-phosphate lyase {ECO:0000256|HAMAP-Rule:MF_00068}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
N-acetylmuramic acid 6-phosphate etherase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAC6_9ACTN
RpiR family transcriptional regulator
L3_122_000G1_scaffold_375_16
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

16737..18167
DNA (1431bp) protein (477aa)
Protein-N(pi)-phosphohistidine--sugar phosphotransferase (EC:2.7.1.69)
Phosphotransferase system, EIIC n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAC7_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74914.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L3_122_000G1_scaffold_375_17
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

18285..19337
DNA (1053bp) protein (351aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZF55_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA35214.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hypothetical protein
L3_122_000G1_scaffold_375_18
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

19430..19789
DNA (360bp) protein (120aa)
Transcriptional regulator, Spx/MgsR family n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAD0_9ACTN
Transcriptional regulator, Spx/MgsR family {ECO:0000313|EMBL:EBA39453.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L3_122_000G1_scaffold_375_19
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(19924..20334)
DNA (411bp) protein (137aa)
Uncharacterized protein n=2 Tax=Collinsella RepID=A4EAD1_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA35212.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hypothetical protein
L3_122_000G1_scaffold_375_20
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

20866..21783
DNA (918bp) protein (306aa)
Tetratricopeptide repeat protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAD3_9ACTN
Tetratricopeptide repeat protein {ECO:0000313|EMBL:EBA39456.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L3_122_000G1_scaffold_375_21
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

21773..22243
DNA (471bp) protein (157aa)
SsrA-binding protein n=2 Tax=Collinsella RepID=A4EAD4_9ACTN
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
SsrA-binding protein
L3_122_000G1_scaffold_375_22
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

22381..22953
DNA (573bp) protein (191aa)
Flavin reductase-like protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZF49_9ACTN
Flavin reductase-like protein {ECO:0000313|EMBL:CDA35209.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
flavin reductase domain-containing FMN-binding protein
L3_122_000G1_scaffold_375_23
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

23004..23186
DNA (183bp) protein (61aa)
Rubredoxin n=2 Tax=Collinsella RepID=A4EAD6_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74907.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
rubredoxin-type Fe(Cys)4 protein
L3_122_000G1_scaffold_375_24
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(23575..24831)
DNA (1257bp) protein (419aa)
Metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAD7_9ACTN
Metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family {ECO:0000313|EMBL:EBA39460.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Mn transporter
L3_122_000G1_scaffold_375_25
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

25274..29971
DNA (4698bp) protein (1566aa)
glutamate synthase [NADPH] large chain (EC:1.4.1.13)
Class II glutamine amidotransferase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAD9_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74905.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L3_122_000G1_scaffold_375_26
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

29977..31458
DNA (1482bp) protein (494aa)
gltD; glutamate synthase, NADH/NADPH, small subunit (EC:1.4.1.14)
Pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAE1_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74904.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L3_122_000G1_scaffold_375_27
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

31856..32563
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZLG2_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA35086.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
L3_122_000G1_scaffold_375_28
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

32847..33917
DNA (1071bp) protein (357aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:398 RepID=R6YT89_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74902.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L3_122_000G1_scaffold_375_29
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

34181..35584
DNA (1404bp) protein (468aa)
Amidohydrolase family protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAE4_9ACTN
Amidohydrolase family protein {ECO:0000313|EMBL:EBA39467.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
amidohydrolase
L3_122_000G1_scaffold_375_30
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(35718..36191)
DNA (474bp) protein (158aa)
Uncharacterized protein n=2 Tax=Collinsella RepID=A4EAE5_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74900.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
Displaying items 1-30 of 113 in total

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