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L3_122_000G1_scaffold_464

Search features with annotation key words

Displaying items 1-30 of 137 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_122_000G1_scaffold_464_1
Clostridium cellulovorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

143..1084
DNA (942bp) protein (314aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9ST36_CLOC7
NAD-dependent epimerase/dehydratase
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:ADL50652.1}; TaxID=573061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 /; 743B).;"
L3_122_000G1_scaffold_464_2
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1526..2953
DNA (1428bp) protein (476aa)
Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosid ase (EC:3.2.1.86)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H2Z9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH97189.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
L3_122_000G1_scaffold_464_3
Desulfotomaculum ruminis, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3034..3627
DNA (594bp) protein (198aa)
Peptidase M56 BlaR1 n=1 Tax=Desulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 / DL) RepID=F6DT27_DESRL
peptidase M56 BlaR1
Peptidase M56 BlaR1 {ECO:0000313|EMBL:AEG61132.1}; TaxID=696281 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 /; DL).;"
L3_122_000G1_scaffold_464_4
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3750..4112
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6UBQ0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKQ57444.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
putative membrane protein
L3_122_000G1_scaffold_464_5
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(4098..4331)
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RVN7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC47066.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
hypothetical protein
L3_122_000G1_scaffold_464_6
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4479..5039
DNA (561bp) protein (187aa)
Putative Transcriptional regulator, TetR family protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6F9T8_9CLOT
Putative Transcriptional regulator, TetR family protein {ECO:0000313|EMBL:CDG01828.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
regulatory protein TetR
L3_122_000G1_scaffold_464_7
unknown

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5138..6028
DNA (891bp) protein (297aa)

This feature has no annotations

L3_122_000G1_scaffold_464_8
unknown

Not on your lists

6022..6204
DNA (183bp) protein (61aa)

This feature has no annotations

L3_122_000G1_scaffold_464_9
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6250..6924
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EKR2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDG01822.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
hypothetical protein
L3_122_000G1_scaffold_464_10
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7042..7581
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6UB41_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKQ56399.1}; Flags: Precursor;; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
hypothetical protein
L3_122_000G1_scaffold_464_11
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7550..7939
DNA (390bp) protein (130aa)
GntR family transcriptional regulator n=1 Tax=Clostridium botulinum RepID=UPI0002FF8FD1
YtrA family transcriptional regulator
Bacterial regulatory s, gntR family protein {ECO:0000313|EMBL:AIY81489.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
L3_122_000G1_scaffold_464_12
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7940..8833
DNA (894bp) protein (298aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UVF2_CLOBO
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EES48053.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
ABC transporter ATP-binding protein
L3_122_000G1_scaffold_464_13
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8817..9875
DNA (1059bp) protein (353aa)
Uncharacterized protein n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6LUM8_CLOB8
putative membrane protein
Putative membrane protein {ECO:0000313|EMBL:AIY83923.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_122_000G1_scaffold_464_14
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10025..10234
DNA (210bp) protein (70aa)
Putative uncharacterized protein n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UV80_CLOBO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD24624.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
L3_122_000G1_scaffold_464_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10331..11149)
DNA (819bp) protein (273aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CQE9_CLOPF
AP endonuclease {ECO:0000313|EMBL:EIA17257.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
AP endonuclease
L3_122_000G1_scaffold_464_16
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11295..12005
DNA (711bp) protein (237aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
Pseudouridine synthase n=1 Tax=Clostridium chauvoei JF4335 RepID=S6F9M4_9CLOT
pseudouridine synthase
L3_122_000G1_scaffold_464_17
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12016..12558
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EKK3_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM67428.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
L3_122_000G1_scaffold_464_18
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12681..13580
DNA (900bp) protein (300aa)
Transcriptional regulator n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6T963_9CLOT
Transcriptional regulator {ECO:0000313|EMBL:EKQ56393.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
RpiR family transcriptional regulator
L3_122_000G1_scaffold_464_19
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13709..14578
DNA (870bp) protein (290aa)
short-chain dehydrogenase n=1 Tax=Clostridium sp. JC122 RepID=UPI000288ED77
Uncharacterized protein {ECO:0000313|EMBL:EOR20024.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
short chain dehydrogenase family protein
L3_122_000G1_scaffold_464_20
unknown

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14742..14852
DNA (111bp) protein (37aa)

This feature has no annotations

L3_122_000G1_scaffold_464_21
unknown

Not on your lists

14967..15407
DNA (441bp) protein (147aa)

This feature has no annotations

L3_122_000G1_scaffold_464_22
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15433..15963)
DNA (531bp) protein (177aa)
Putative Mn-containing catalase n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EYC2_9CLOT
Putative Mn-containing catalase {ECO:0000313|EMBL:CDG01301.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
hypothetical protein
L3_122_000G1_scaffold_464_23
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16053..16196
DNA (144bp) protein (48aa)
Uncharacterized protein n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8FS39_CLOPA
Uncharacterized protein {ECO:0000313|EMBL:ETD66227.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
hypothetical protein
L3_122_000G1_scaffold_464_24
Exiguobacterium sibiricum, Exiguobacterium, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16346..16858
DNA (513bp) protein (171aa)
CMP/dCMP deaminase zinc-binding n=1 Tax=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) RepID=B1YHM9_EXIS2
zinc-binding CMP/dCMP deaminase
CMP/dCMP deaminase zinc-binding {ECO:0000313|EMBL:ACB61202.1}; TaxID=262543 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XII. Incertae Sedis; Exiguobacterium.;" source="Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15).;"
L3_122_000G1_scaffold_464_25
unknown

Not on your lists

17071..17265
DNA (195bp) protein (65aa)

This feature has no annotations

L3_122_000G1_scaffold_464_26
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17317..19053)
DNA (1737bp) protein (579aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H3W0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98067.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
L3_122_000G1_scaffold_464_27
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19055..20794)
DNA (1740bp) protein (580aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HEL0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98066.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
L3_122_000G1_scaffold_464_28
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21010..21903
DNA (894bp) protein (298aa)
Radical SAM domain protein n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7TC71_CLOSG
Clostridium botulinum B2 450 B2_450_contig006, whole genome shotgun sequence {ECO:0000313|EMBL:KIS25315.1}; TaxID=1379739 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum B2 450.;"
hypothetical protein
L3_122_000G1_scaffold_464_29
Clostridium novyi, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21925..22605
DNA (681bp) protein (227aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1444289 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium novyi A str. 4552.;"
rluF; Ribosomal large subunit pseudouridine synthase F (EC:5.4.99.21)
Pseudouridine synthase n=1 Tax=Clostridium chauvoei JF4335 RepID=S6F7U7_9CLOT
L3_122_000G1_scaffold_464_30
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22757..22909
DNA (153bp) protein (51aa)
Conserved domain protein n=4 Tax=Clostridium botulinum RepID=B2TS03_CLOBB
hypothetical protein
Putative zinc-binding domain protein {ECO:0000313|EMBL:AIY81993.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
Displaying items 1-30 of 137 in total

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