ggKbase home page

L3_122_000G1_scaffold_468

Search features with annotation key words

Displaying items 1-30 of 191 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_122_000G1_scaffold_468_1
uncultured Collinsella sp. SMG3, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

2..436
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=uncultured Collinsella sp. SMG3 RepID=H6WNM9_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:AFA54810.1}; TaxID=1131819 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="uncultured Collinsella sp. SMG3.;"
MazG family protein
L3_122_000G1_scaffold_468_2
uncultured Collinsella sp. SMG3, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

625..1914
DNA (1290bp) protein (430aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; TaxID=1131819 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="uncultured Collinsella sp. SMG3.;"
enolase (EC:4.2.1.11)
Enolase n=1 Tax=uncultured Collinsella sp. SMG3 RepID=H6WNM8_9ACTN
L3_122_000G1_scaffold_468_3
uncultured Collinsella sp. SMG3, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

2111..2872
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=uncultured Collinsella sp. SMG3 RepID=H6WNM7_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:AFA54808.1}; TaxID=1131819 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="uncultured Collinsella sp. SMG3.;"
hypothetical protein
L3_122_000G1_scaffold_468_4
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

2893..3894
DNA (1002bp) protein (334aa)
Ppx/GppA phosphatase family protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EC06_9ACTN
Ppx/GppA phosphatase family protein {ECO:0000313|EMBL:EBA38899.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Ppx/GppA phosphatase
L3_122_000G1_scaffold_468_5
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(4356..4979)
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EC07_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA38900.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L3_122_000G1_scaffold_468_6
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

5143..5430
DNA (288bp) protein (96aa)
PTS system, Lactose/Cellobiose specific IIB subunit n=2 Tax=Collinsella RepID=A4EC08_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74164.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
PTS system lactose/cellobiose-specific transporter subunit IIB
L3_122_000G1_scaffold_468_7
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

5442..5816
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZJB5_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA36699.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hypothetical protein
L3_122_000G1_scaffold_468_8
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(5892..7187)
DNA (1296bp) protein (432aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EC11_9ACTN
integral membrane sensor signal transduction histidine kinase
L3_122_000G1_scaffold_468_9
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(7171..7950)
DNA (780bp) protein (260aa)
Response regulator receiver domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EC12_9ACTN
Response regulator receiver domain protein {ECO:0000313|EMBL:EBA38905.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
two component transcriptional regulator, winged helix family
L3_122_000G1_scaffold_468_10
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(7969..8511)
DNA (543bp) protein (181aa)
UBA/TS-N domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZHN3_9ACTN
UBA/TS-N domain protein {ECO:0000313|EMBL:CDA36049.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
ubiquitin-associated-domain-containing protein
L3_122_000G1_scaffold_468_11
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

9061..9300
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZNX1_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA36046.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
L3_122_000G1_scaffold_468_12
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

9386..10111
DNA (726bp) protein (242aa)
Ser/Thr phosphatase family protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZHM9_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74156.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L3_122_000G1_scaffold_468_13
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(10129..11247)
DNA (1119bp) protein (373aa)
Glutamyl-Q tRNA(Asp) synthetase {ECO:0000256|SAAS:SAAS00018238}; EC=6.1.1.- {ECO:0000256|SAAS:SAAS00018222};; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
Putative glutamyl-queuosine tRNA(Asp) synthetase n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z8Q1_9ACTN
glutamyl/glutaminyl-tRNA synthetase
L3_122_000G1_scaffold_468_14
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

11643..13592
DNA (1950bp) protein (650aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R6A4L5_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA36042.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hypothetical protein
L3_122_000G1_scaffold_468_15
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(13941..14582)
DNA (642bp) protein (214aa)
Acetyltransferase GNAT family n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZNW7_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74307.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
GCN5-related N-acetyltransferase
L3_122_000G1_scaffold_468_16
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

14848..16455
DNA (1608bp) protein (536aa)
IMP cyclohydrolase; phosphoribosylaminoimidazolecarboxamide formyltransferase (EC:3.5.4.10 2.1.2.3)
Bifunctional purine biosynthesis protein PurH n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZB44_9ACTN
Bifunctional purine biosynthesis protein PurH {ECO:0000256|HAMAP-Rule:MF_00139, ECO:0000256|SAAS:SAAS00010516}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
L3_122_000G1_scaffold_468_17
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

16646..17353
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EC22_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74305.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L3_122_000G1_scaffold_468_18
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

17532..18203
DNA (672bp) protein (224aa)
Response regulator receiver domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EC24_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74304.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
two component transcriptional regulator, winged helix family
L3_122_000G1_scaffold_468_19
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

18213..19256
DNA (1044bp) protein (348aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZHM0_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74303.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
integral membrane sensor signal transduction histidine kinase
L3_122_000G1_scaffold_468_20
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(19569..20006)
DNA (438bp) protein (146aa)
Universal stress protein n=2 Tax=Collinsella RepID=A4EC26_9ACTN
Universal stress protein {ECO:0000256|PIRNR:PIRNR006276}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
UspA domain-containing protein
L3_122_000G1_scaffold_468_21
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

20288..21235
DNA (948bp) protein (316aa)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphate phosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
UDP-diphosphatase (EC:3.6.1.27)
Undecaprenyl-diphosphatase n=1 Tax=Collinsella sp. CAG:166 RepID=R6A4K8_9ACTN
L3_122_000G1_scaffold_468_22
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

21593..24493
DNA (2901bp) protein (967aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
UvrD/REP helicase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EC28_9ACTN
UvrD/REP helicase
L3_122_000G1_scaffold_468_23
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(24878..25816)
DNA (939bp) protein (313aa)
Mannose-6-phosphate isomerase, class I {ECO:0000313|EMBL:EBA38922.1}; EC=5.3.1.8 {ECO:0000313|EMBL:EBA38922.1};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
mannose-6-phosphate isomerase (EC:5.3.1.8)
Mannose-6-phosphate isomerase, class I n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EC29_9ACTN
L3_122_000G1_scaffold_468_24
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(25884..26603)
DNA (720bp) protein (240aa)
Transcriptional regulator GntR family n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZHL7_9ACTN
Transcriptional regulator GntR family {ECO:0000313|EMBL:CDA36029.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
GntR family transcriptional regulator
L3_122_000G1_scaffold_468_25
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

26906..28306
DNA (1401bp) protein (467aa)
aryl-phospho-beta-glucosidase (EC:3.2.1.86)
Aryl-phospho-beta-glucosidase n=1 Tax=Coriobacterium glomerans (strain ATCC 49209 / DSM 20642 / JCM 10262 / PW2) RepID=F2N8X9_CORGP
Uncharacterized protein {ECO:0000313|EMBL:KGI74297.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L3_122_000G1_scaffold_468_26
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

28427..29779
DNA (1353bp) protein (451aa)
PTS system, lactose/cellobiose family IIC subunit n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W8S7_ATOPD
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
PTS system lactose/cellobiose family transporter subunit IIC
L3_122_000G1_scaffold_468_27
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

29933..30235
DNA (303bp) protein (101aa)
Phosphotransferase system lactose/cellobiose-specific IIB subunit n=1 Tax=Coriobacterium glomerans (strain ATCC 49209 / DSM 20642 / JCM 10262 / PW2) RepID=F2N8X7_CORGP
Uncharacterized protein {ECO:0000313|EMBL:KGI74295.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
PTS system lactose/cellobiose-specific transporter subunit IIB
L3_122_000G1_scaffold_468_28
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

30245..30577
DNA (333bp) protein (111aa)
Phosphotransferase system PTS lactose/cellobiose-specific IIA subunit n=1 Tax=Coriobacterium glomerans (strain ATCC 49209 / DSM 20642 / JCM 10262 / PW2) RepID=F2N8X6_CORGP
Uncharacterized protein {ECO:0000313|EMBL:KGI74294.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
phosphotransferase system PTS lactose/cellobiose-specific IIA subunit
L3_122_000G1_scaffold_468_29
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

30817..31770
DNA (954bp) protein (318aa)
glucokinase (EC:2.7.1.2)
ROK family protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z8N9_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74293.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L3_122_000G1_scaffold_468_30
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

31898..32821
DNA (924bp) protein (308aa)
inorganic diphosphatase (EC:3.6.1.1)
DHHA2 domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EC32_9ACTN
DHHA2 domain protein {ECO:0000313|EMBL:EBA38925.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Displaying items 1-30 of 191 in total

View Taxonomy