ggKbase home page

L3_122_000G1_scaffold_489

Search features with annotation key words

Displaying items 1-30 of 82 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_122_000G1_scaffold_489_1
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(373..1248)
DNA (876bp) protein (292aa)
Membrane protein n=2 Tax=Bacteroidales RepID=D7IP99_9BACE
Membrane protein {ECO:0000313|EMBL:EFI09237.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
hypothetical protein
L3_122_000G1_scaffold_489_2
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1407..2756
DNA (1350bp) protein (450aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IP98_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFI09236.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
transmembrane cation efflux protein
L3_122_000G1_scaffold_489_3
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2753..3343
DNA (591bp) protein (197aa)
Regulatory protein n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IP97_9BACE
Cyclic nucleotide-binding domain protein {ECO:0000313|EMBL:KDS54058.1}; TaxID=1339341 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3776 Po2 i.;"
regulatory protein
L3_122_000G1_scaffold_489_4
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3493..3702)
DNA (210bp) protein (70aa)
Uncharacterized protein n=5 Tax=Bacteroidales RepID=A6LCQ1_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEU51623.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L3_122_000G1_scaffold_489_5
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3940..4899)
DNA (960bp) protein (320aa)
Uncharacterized protein n=4 Tax=Bacteroidales RepID=A6LCQ2_PARD8
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EFI09233.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
L3_122_000G1_scaffold_489_6
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4987..5631)
DNA (645bp) protein (215aa)
cAMP-binding domain transcriptional regulator n=6 Tax=Bacteroidales RepID=A6LCQ3_PARD8
cAMP-binding domain-containing protein
Cyclic nucleotide-binding domain protein {ECO:0000313|EMBL:KDS59805.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L3_122_000G1_scaffold_489_7
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5746..7392
DNA (1647bp) protein (549aa)
Hydroxylamine reductase {ECO:0000255|HAMAP-Rule:MF_00069}; EC=1.7.99.1 {ECO:0000255|HAMAP-Rule:MF_00069};; Hybrid-cluster protein {ECO:0000255|HAMAP-Rule:MF_00069}; Short=HCP {ECO:0000255|HAMAP-Rule:MF_00069};; Prismane protein {ECO:0000255|HAMAP-Rule:MF_00069}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
Hydroxylamine reductase n=2 Tax=Bacteroidales RepID=HCP_PARD8
hydroxylamine reductase
L3_122_000G1_scaffold_489_8
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7448..8305
DNA (858bp) protein (286aa)
Pyridoxal kinase {ECO:0000256|SAAS:SAAS00088591}; EC=2.7.1.35 {ECO:0000256|SAAS:SAAS00088591};; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
Pyridoxal kinase, putative n=5 Tax=Bacteroidales RepID=A6LCQ5_PARD8
pyridoxal kinase
L3_122_000G1_scaffold_489_9
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8355..9293
DNA (939bp) protein (313aa)
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
2-dehydropantoate 2-reductase n=3 Tax=Bacteroidales RepID=D7IP91_9BACE
2-dehydropantoate 2-reductase
L3_122_000G1_scaffold_489_10
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9305..9877
DNA (573bp) protein (191aa)
DNA-3-methyladenine glycosylase I n=6 Tax=Bacteroidales RepID=A6LCQ7_PARD8
DNA-3-methyladenine glycosylase I
DNA-3-methyladenine glycosylase I {ECO:0000313|EMBL:ABR43471.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L3_122_000G1_scaffold_489_11
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9952..10929)
DNA (978bp) protein (326aa)
Mannose-6-phosphate isomerase, class I n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IP89_9BACE
Mannose-6-phosphate isomerase, class I {ECO:0000313|EMBL:EFI09227.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
mannose-6-phosphate isomerase
L3_122_000G1_scaffold_489_12
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10953..12971)
DNA (2019bp) protein (673aa)
1,4-alpha-glucan branching enzyme {ECO:0000256|SAAS:SAAS00046836}; EC=2.4.1.18 {ECO:0000256|SAAS:SAAS00046836};; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
1,4-alpha-glucan branching enzyme n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IP88_9BACE
1,4-alpha-glucan branching protein
L3_122_000G1_scaffold_489_13
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13070..15358
DNA (2289bp) protein (763aa)
Transporter, CPA2 family n=5 Tax=Bacteroidales RepID=C7X8T5_9PORP
Transporter, CPA2 family {ECO:0000313|EMBL:EEU51614.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
cation/H+ antiporter
L3_122_000G1_scaffold_489_14
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15388..15972
DNA (585bp) protein (195aa)
Nitroreductase family protein n=4 Tax=Bacteroidales RepID=C7X8T4_9PORP
NADH dehydrogenase/NAD(P)H nitroreductase
Nitroreductase family protein {ECO:0000313|EMBL:EFI09224.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
L3_122_000G1_scaffold_489_15
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15975..18956)
DNA (2982bp) protein (994aa)
Exonuclease SbcCD, C subunit n=2 Tax=Parabacteroides RepID=E1YSA8_9PORP
AAA domain protein {ECO:0000313|EMBL:KDS54116.1}; TaxID=1339341 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3776 Po2 i.;"
ATP-dependent exonuclease sbcC
L3_122_000G1_scaffold_489_16
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18953..20203)
DNA (1251bp) protein (417aa)
Exonuclease SbcCD, D subunit n=2 Tax=Parabacteroides RepID=E1YSA7_9PORP
Exonuclease SbcCD, D subunit {ECO:0000313|EMBL:EKN25826.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
exonuclease
L3_122_000G1_scaffold_489_17
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20286..21539)
DNA (1254bp) protein (418aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
Putative two-component regulator sensor kinase n=1 Tax=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) RepID=A6LCR4_PARD8
two-component regulator sensor kinase
L3_122_000G1_scaffold_489_18
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21976..22422)
DNA (447bp) protein (149aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A6LCR5_PARD8
non-specific DNA-binding protein
Uncharacterized protein {ECO:0000313|EMBL:ABR43479.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L3_122_000G1_scaffold_489_19
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22635..24920
DNA (2286bp) protein (762aa)
malic enzyme (EC:1.1.1.40)
Malate dehydrogenase (Oxaloacetate-decarboxylating) (NADP(+)) n=2 Tax=Parabacteroides RepID=E1YSA3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN25822.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
L3_122_000G1_scaffold_489_20
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24994..25887)
DNA (894bp) protein (298aa)
D-isomer specific 2-hydroxyacid dehydrogenase n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IP42_9BACE
D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain protein {ECO:0000313|EMBL:KDS54138.1}; TaxID=1339341 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3776 Po2 i.;"
D-3-phosphoglycerate dehydrogenase
L3_122_000G1_scaffold_489_21
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25912..26391)
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TJ34_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEY81730.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
hypothetical protein
L3_122_000G1_scaffold_489_22
Prevotella ruminicola, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26421..27395)
DNA (975bp) protein (325aa)
Death-on-curing family protein n=1 Tax=Prevotella ruminicola (strain ATCC 19189 / JCM 8958 / 23) RepID=D5EY93_PRER2
death-on-curing family protein
Death-on-curing family protein {ECO:0000313|EMBL:ADE82460.1}; TaxID=264731 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella ruminicola (strain ATCC 19189 / JCM 8958 / 23).;"
L3_122_000G1_scaffold_489_23
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27491..28897
DNA (1407bp) protein (469aa)
Efflux transporter, outer membrane factor lipoprotein, NodT family n=2 Tax=Parabacteroides RepID=E1YS99_9PORP
Efflux transporter, outer membrane factor lipoprotein, NodT family {ECO:0000313|EMBL:EFK63430.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
outer membrane efflux protein oprM
L3_122_000G1_scaffold_489_24
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28967..30082
DNA (1116bp) protein (372aa)
Cation efflux pump n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IP39_9BACE
Cation efflux pump {ECO:0000313|EMBL:EFI09177.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
cation efflux pump
L3_122_000G1_scaffold_489_25
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30090..33227
DNA (3138bp) protein (1046aa)
Multidrug efflux pump BpeF n=5 Tax=Bacteroidales RepID=C7X8S3_9PORP
cation efflux pump
Multidrug efflux pump BpeF {ECO:0000313|EMBL:EEU51602.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L3_122_000G1_scaffold_489_26
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33336..33737)
DNA (402bp) protein (134aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
Peptidyl-prolyl cis-trans isomerase n=2 Tax=Bacteroidales RepID=A6LCS2_PARD8
peptidyl-prolyl cis-trans isomerase
L3_122_000G1_scaffold_489_27
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33847..34059
DNA (213bp) protein (71aa)
Uncharacterized protein n=5 Tax=Parabacteroides RepID=C7X8S1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN25814.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
L3_122_000G1_scaffold_489_28
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34244..34339
DNA (96bp) protein (32aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=K6AEW0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN25813.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
L3_122_000G1_scaffold_489_29
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34726..36192
DNA (1467bp) protein (489aa)
Catalase {ECO:0000256|RuleBase:RU000498}; EC=1.11.1.6 {ECO:0000256|RuleBase:RU000498};; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
Catalase n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IP36_9BACE
catalase
L3_122_000G1_scaffold_489_30
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36264..36638)
DNA (375bp) protein (125aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IP35_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFI09173.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
hypothetical protein
Displaying items 1-30 of 82 in total

View Taxonomy