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L3_122_000G1_scaffold_1584

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_122_000G1_scaffold_1584_1
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(38..529)
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. HPA0247 RepID=S3AAJ6_9ACTO
PF11259 family protein {ECO:0000313|EMBL:EWC97257.1}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
L3_122_000G1_scaffold_1584_2
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(579..1790)
DNA (1212bp) protein (404aa)
OmpA family protein n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BBG9_9ACTO
OmpA family protein {ECO:0000313|EMBL:EDN80543.1}; TaxID=411466 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces odontolyticus ATCC 17982.;"
outer membrane protein/peptidoglycan-associated (lipo)protein
L3_122_000G1_scaffold_1584_3
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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2023..2799
DNA (777bp) protein (259aa)
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01039, ECO:0000256|RuleBase:RU004512}; Short=BPG-dependent PGAM {ECO:0000256|HAMAP-Rule:MF_01039};; Short=PGAM {ECO:0000256|HAMAP-Rule:MF_01039};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01039};; Short=dPGM {ECO:0000256|HAMAP-Rule:MF_01039};; EC=5.4.2.11 {ECO:0000256|HAMAP-Rule:MF_01039, ECO:0000256|RuleBase:RU004512};; TaxID=649742 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces odontolyticus F0309.;"
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase n=1 Tax=Actinomyces odontolyticus F0309 RepID=D4U254_9ACTO
gpmA; phosphoglyceromutase
L3_122_000G1_scaffold_1584_4
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3074..3592
DNA (519bp) protein (173aa)
CarD-like protein n=2 Tax=Actinomyces odontolyticus RepID=A7BBH1_9ACTO
CarD-like protein {ECO:0000313|EMBL:EWC97259.1}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
BadM/Rrf2 family transcriptional regulator
L3_122_000G1_scaffold_1584_5
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3576..4292
DNA (717bp) protein (239aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493}; EC=2.7.7.60 {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493};; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase {ECO:0000256|HAMAP-Rule:MF_00108}; MEP cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BBH2_9ACTO
4-diphosphocytidyl-2-C-methyl-D-erythritol synthase
L3_122_000G1_scaffold_1584_6
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4334..5122)
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. oral taxon 180 str. F0310 RepID=E6KSB8_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EWC97261.1}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
L3_122_000G1_scaffold_1584_7
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5229..6053)
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BBH5_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EDN80549.1}; TaxID=411466 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces odontolyticus ATCC 17982.;"
L3_122_000G1_scaffold_1584_8
Actinomyces sp. oral taxon 172, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6058..6834)
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. oral taxon 172 str. F0311 RepID=U1SAK8_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:ERH28928.1}; TaxID=1321775 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. oral taxon 172 str. F0311.;"
L3_122_000G1_scaffold_1584_9
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7011..8360
DNA (1350bp) protein (450aa)
Vacuole effluxer Atg22-like protein n=1 Tax=Actinomyces sp. ICM39 RepID=J3J4J7_9ACTO
Vacuole effluxer Atg22-like protein {ECO:0000313|EMBL:EWC97250.1}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
major facilitator superfamily transporter
L3_122_000G1_scaffold_1584_10
Actinomyces sp. oral taxon 180, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8453..9880)
DNA (1428bp) protein (476aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. oral taxon 180 str. F0310 RepID=E6KSB6_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EFU61140.1}; TaxID=888052 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. oral taxon 180 str. F0310.;"
L3_122_000G1_scaffold_1584_11
Actinomyces sp. oral taxon 180, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9919..11385)
DNA (1467bp) protein (489aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. oral taxon 180 str. F0310 RepID=E6KSB5_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EFU61139.1}; TaxID=888052 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. oral taxon 180 str. F0310.;"
L3_122_000G1_scaffold_1584_12
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11436..13355)
DNA (1920bp) protein (640aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. HPA0247 RepID=S2Z942_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EPD73283.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
hypothetical protein
L3_122_000G1_scaffold_1584_13
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13399..13893)
DNA (495bp) protein (165aa)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395}; Short=MECDP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPS {ECO:0000256|HAMAP-Rule:MF_00107};; EC=4.6.1.12 {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395};; TaxID=649742 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces odontolyticus F0309.;"
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Actinomyces odontolyticus F0309 RepID=D4U239_9ACTO
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
L3_122_000G1_scaffold_1584_14
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13909..15624)
DNA (1716bp) protein (572aa)
Uncharacterized protein n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BBI0_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EDN80554.1}; TaxID=411466 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces odontolyticus ATCC 17982.;"
L3_122_000G1_scaffold_1584_15
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15635..17026)
DNA (1392bp) protein (464aa)
Uncharacterized protein n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BBI1_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EDN80555.1}; TaxID=411466 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces odontolyticus ATCC 17982.;"
L3_122_000G1_scaffold_1584_16
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17250..18707
DNA (1458bp) protein (486aa)
Threonine synthase {ECO:0000313|EMBL:EWC97252.1}; EC=4.2.3.1 {ECO:0000313|EMBL:EWC97252.1};; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
Threonine synthase n=1 Tax=Actinomyces sp. ICM39 RepID=J2YP98_9ACTO
thrC; threonine synthase
L3_122_000G1_scaffold_1584_17
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18847..20304
DNA (1458bp) protein (486aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
cysteinyl-tRNA synthetase (EC:6.1.1.16)
Cysteine--tRNA ligase n=1 Tax=Actinomyces sp. HPA0247 RepID=S2ZTC3_9ACTO
L3_122_000G1_scaffold_1584_18
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20655..21371
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Actinomyces odontolyticus F0309 RepID=D4U205_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EFF78844.1}; TaxID=649742 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces odontolyticus F0309.;"
L3_122_000G1_scaffold_1584_19
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21532..22080
DNA (549bp) protein (183aa)
PF08002 family protein n=1 Tax=Actinomyces sp. ICM39 RepID=J3J582_9ACTO
PF08002 family protein {ECO:0000313|EMBL:EWC99085.1}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
hypothetical protein
L3_122_000G1_scaffold_1584_20
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22189..22875
DNA (687bp) protein (229aa)
membrane protease FtsH catalytic subunit (EC:3.4.24.-)
RNA methyltransferase, TrmH family, group 3 n=1 Tax=Actinomyces odontolyticus F0309 RepID=D4TZS1_9ACTO
RNA methyltransferase, TrmH family, group 3 {ECO:0000313|EMBL:EFF79576.1}; TaxID=649742 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces odontolyticus F0309.;"
Displaying 20 items

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