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L3_122_000G1_scaffold_281

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Displaying items 1-30 of 82 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_122_000G1_scaffold_281_1
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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588..2852
DNA (2265bp) protein (755aa)
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
glycogen/starch/alpha-glucan phosphorylases (EC:2.4.1.1)
Phosphorylase n=2 Tax=Clostridiales RepID=R5XN14_9CLOT
L3_122_000G1_scaffold_281_2
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3100..4449
DNA (1350bp) protein (450aa)
ABC transporter, solute-binding protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0ACW8_9FIRM
ABC transporter, solute-binding protein {ECO:0000313|EMBL:EDQ95505.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
extracellular solute-binding protein
L3_122_000G1_scaffold_281_3
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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4602..5447
DNA (846bp) protein (282aa)
ABC transporter, permease protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0ACW9_9FIRM
ABC transporter, permease protein {ECO:0000313|EMBL:EDQ95506.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
binding--dependent transport system inner membrane component family protein
L3_122_000G1_scaffold_281_4
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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5447..6331
DNA (885bp) protein (295aa)
ABC transporter permease protein n=2 Tax=Clostridiales RepID=R5X325_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ETI93951.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
binding-protein-dependent transport system inner membrane protein
L3_122_000G1_scaffold_281_5
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6358..7839
DNA (1482bp) protein (494aa)
4-alpha-glucanotransferase {ECO:0000256|RuleBase:RU361207}; EC=2.4.1.25 {ECO:0000256|RuleBase:RU361207};; Amylomaltase {ECO:0000256|RuleBase:RU361207}; Disproportionating enzyme {ECO:0000256|RuleBase:RU361207}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
4-alpha-glucanotransferase (EC:2.4.1.25)
4-alpha-glucanotransferase n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0ACX3_9FIRM
L3_122_000G1_scaffold_281_6
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7900..8934
DNA (1035bp) protein (345aa)
UPI0003D689D5 related cluster n=1 Tax=unknown RepID=UPI0003D689D5
Uncharacterized protein {ECO:0000313|EMBL:ETI93949.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
LacI family transcriptional regulator
L3_122_000G1_scaffold_281_7
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8972..10084
DNA (1113bp) protein (371aa)
ABC transporter ATP-binding protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5X5M9_9CLOT
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDA10070.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
carbohydrate ABC transporter ATP-binding protein, CUT1 family (TC 3.A.1.1.-)
L3_122_000G1_scaffold_281_8
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10157..10786
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0ACX6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDQ95513.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
Predicted integral membrane protein
L3_122_000G1_scaffold_281_9
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10984..12459
DNA (1476bp) protein (492aa)
putative arginine decarboxylase (EC:4.1.1.19)
Orn/Lys/Arg decarboxylase major domain protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5X323_9CLOT
Orn/Lys/Arg decarboxylase major domain protein {ECO:0000313|EMBL:CDA10068.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
L3_122_000G1_scaffold_281_10
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12500..13174
DNA (675bp) protein (225aa)
Thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
UPI0003D68EEE related cluster n=1 Tax=unknown RepID=UPI0003D68EEE
thymidylate kinase
L3_122_000G1_scaffold_281_11
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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13273..14211
DNA (939bp) protein (313aa)
DNA polymerase III subunit delta' (EC:2.7.7.7)
Putative DNA polymerase III, delta' subunit n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0ACX9_9FIRM
Putative DNA polymerase III, delta' subunit {ECO:0000313|EMBL:EDQ95516.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
L3_122_000G1_scaffold_281_12
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14205..15104
DNA (900bp) protein (300aa)
PSP1 C-terminal domain protein n=2 Tax=Clostridiales RepID=B0ACY0_9FIRM
PSP1 C-terminal domain protein {ECO:0000313|EMBL:CDA10065.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
signal peptidase II
L3_122_000G1_scaffold_281_13
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15115..15864
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0ACY1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDQ95518.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
methyltransferase
L3_122_000G1_scaffold_281_14
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15866..16699
DNA (834bp) protein (278aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
Ribosomal RNA small subunit methyltransferase I n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0ACY2_9FIRM
corrin/porphyrin methyltransferase
L3_122_000G1_scaffold_281_15
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16743..17459
DNA (717bp) protein (239aa)
UPI0003D5E7DA related cluster n=1 Tax=unknown RepID=UPI0003D5E7DA
Uncharacterized protein {ECO:0000313|EMBL:ETI93940.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
hypothetical protein
L3_122_000G1_scaffold_281_16
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17524..17952)
DNA (429bp) protein (143aa)
Transcriptional regulator, AsnC family n=2 Tax=Clostridiales RepID=B0ACY4_9FIRM
Transcriptional regulator AsnC family {ECO:0000313|EMBL:CDA09160.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
AsnC family transcriptional regulator
L3_122_000G1_scaffold_281_17
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17989..19419)
DNA (1431bp) protein (477aa)
Nicotinate phosphoribosyltransferase {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163}; EC=6.3.4.21 {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163};; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
Nicotinate phosphoribosyltransferase n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0ACY5_9FIRM
putative nicotinate phosphribosyltransferase
L3_122_000G1_scaffold_281_18
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19612..20166
DNA (555bp) protein (185aa)
UPI0003D5F422 related cluster n=1 Tax=unknown RepID=UPI0003D5F422
Uncharacterized protein {ECO:0000313|EMBL:ETI93937.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
spmA; spore maturation protein A
L3_122_000G1_scaffold_281_19
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20166..20690
DNA (525bp) protein (175aa)
Transporter gate domain protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0ACY7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETI93936.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
spmB; spore maturation protein B
L3_122_000G1_scaffold_281_20
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20881..21114
DNA (234bp) protein (78aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0ACY8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA09164.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
L3_122_000G1_scaffold_281_21
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


21526..23472
DNA (1947bp) protein (649aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01228}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
UPI0003D59B08 related cluster n=1 Tax=unknown RepID=UPI0003D59B08
metG; methionyl-tRNA synthetase
L3_122_000G1_scaffold_281_22
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23485..24255
DNA (771bp) protein (257aa)
Hydrolase TatD family n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XKT4_9CLOT
Hydrolase TatD family {ECO:0000313|EMBL:CDA09166.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
putative deoxyribonuclease
L3_122_000G1_scaffold_281_23
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24439..24951
DNA (513bp) protein (171aa)
RNA polymerase sigma factor sigma-70 family n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XXD6_9CLOT
RNA polymerase sigma factor sigma-70 family {ECO:0000313|EMBL:CDA09167.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
ECF subfamily RNA polymerase sigma-24 subunit
L3_122_000G1_scaffold_281_24
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24953..26227
DNA (1275bp) protein (425aa)
UPI0003D5DFAE related cluster n=1 Tax=unknown RepID=UPI0003D5DFAE
Uncharacterized protein {ECO:0000313|EMBL:CDA09168.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
L3_122_000G1_scaffold_281_25
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26680..27228
DNA (549bp) protein (183aa)
Ribonuclease M5 {ECO:0000256|HAMAP-Rule:MF_01469}; EC=3.1.26.8 {ECO:0000256|HAMAP-Rule:MF_01469};; RNase M5 {ECO:0000256|HAMAP-Rule:MF_01469}; Ribosomal RNA terminal maturase M5 {ECO:0000256|HAMAP-Rule:MF_01469}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
Ribonuclease M5 n=2 Tax=Clostridium bartlettii CAG:1329 RepID=R5X9W4_9CLOT
putative DNA-binding protein
L3_122_000G1_scaffold_281_26
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


27230..28096
DNA (867bp) protein (289aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000256|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
UPI0003D68A18 related cluster n=1 Tax=unknown RepID=UPI0003D68A18
ksgA; dimethyladenosine transferase
L3_122_000G1_scaffold_281_27
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28161..29561
DNA (1401bp) protein (467aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XKT8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA09171.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
hypothetical protein
L3_122_000G1_scaffold_281_28
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29874..30848
DNA (975bp) protein (325aa)
UPI0003D5D6AE related cluster n=1 Tax=unknown RepID=UPI0003D5D6AE
Uncharacterized protein {ECO:0000313|EMBL:ETI93836.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
cation efflux protein
L3_122_000G1_scaffold_281_29
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30917..31708
DNA (792bp) protein (264aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0ACZ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA09173.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
hypothetical protein
L3_122_000G1_scaffold_281_30
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31830..33182)
DNA (1353bp) protein (451aa)
UDP-N-acetylmuramate--L-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344}; EC=6.3.2.8 {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344};; UDP-N-acetylmuramoyl-L-alanine synthetase {ECO:0000256|HAMAP-Rule:MF_00046}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
UDP-N-acetylmuramate--L-alanine ligase n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0ACZ8_9FIRM
murC; UDP-N-acetylmuramate--L-alanine ligase
Displaying items 1-30 of 82 in total

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