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L3_122_000M1_scaffold_3285

Search features with annotation key words

Displaying items 1-30 of 66 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_122_000M1_scaffold_3285_1
unknown

Not on your lists

comp(58..330)
DNA (273bp) protein (91aa)

This feature has no annotations

L3_122_000M1_scaffold_3285_2
Blautia hydrogenotrophica, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(690..2474)
DNA (1785bp) protein (595aa)
Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CLM0_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EEG49337.1}; TaxID=476272 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hydrogenotrophica DSM 10507.;"
Superfamily II helicase and inactivated derivatives-like
L3_122_000M1_scaffold_3285_3
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2477..2968)
DNA (492bp) protein (164aa)
CHC2 zinc finger domain protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GC31_9FIRM
CHC2 zinc finger domain protein {ECO:0000313|EMBL:EEV00675.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
zinc finger, CHC2-family protein
L3_122_000M1_scaffold_3285_4
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2961..3449)
DNA (489bp) protein (163aa)
Putative uncharacterized protein n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KQ31_CLOPH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX43343.1}; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
L3_122_000M1_scaffold_3285_5
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3446..3868)
DNA (423bp) protein (141aa)
Single-stranded DNA-binding protein n=1 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JQF6_9FIRM
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|RuleBase:RU000524}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
single-strand binding protein
L3_122_000M1_scaffold_3285_6
unknown

Not on your lists

comp(3865..4101)
DNA (237bp) protein (79aa)

This feature has no annotations

L3_122_000M1_scaffold_3285_7
Peptostreptococcaceae bacterium OBRC8, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4043..4354)
DNA (312bp) protein (104aa)
Erf family protein n=1 Tax=Eubacteriaceae bacterium OBRC8 RepID=J6HBK7_9FIRM
Erf family protein {ECO:0000313|EMBL:EJU22515.1}; TaxID=796941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium OBRC8.;"
ERF family protein
L3_122_000M1_scaffold_3285_8
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(4357..4557)
DNA (201bp) protein (67aa)
Arginyl-tRNA synthetase n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RDX0_9FIRM
Arginyl-tRNA synthetase {ECO:0000313|EMBL:CDC47058.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
L3_122_000M1_scaffold_3285_9
unknown

Not on your lists

comp(4544..4720)
DNA (177bp) protein (59aa)

This feature has no annotations

L3_122_000M1_scaffold_3285_10
unknown

Not on your lists

comp(4723..4947)
DNA (225bp) protein (75aa)

This feature has no annotations

L3_122_000M1_scaffold_3285_11
unknown

Not on your lists

comp(4940..5221)
DNA (282bp) protein (94aa)

This feature has no annotations

L3_122_000M1_scaffold_3285_12
unknown

Not on your lists

comp(5242..5373)
DNA (132bp) protein (44aa)

This feature has no annotations

L3_122_000M1_scaffold_3285_13
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5375..5551)
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:58 RepID=R6SKJ0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC47082.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
L3_122_000M1_scaffold_3285_14
unknown

Not on your lists

comp(5687..6016)
DNA (330bp) protein (110aa)

This feature has no annotations

L3_122_000M1_scaffold_3285_15
unknown

Not on your lists

comp(6236..6556)
DNA (321bp) protein (107aa)

This feature has no annotations

L3_122_000M1_scaffold_3285_16
unknown

Not on your lists

comp(6557..6709)
DNA (153bp) protein (51aa)

This feature has no annotations

L3_122_000M1_scaffold_3285_17
unknown

Not on your lists

6760..7137
DNA (378bp) protein (126aa)

This feature has no annotations

L3_122_000M1_scaffold_3285_18
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

7278..7640
DNA (363bp) protein (121aa)
DNA-binding helix-turn-helix protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R2P6_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:CCZ35415.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
transcriptional regulator
L3_122_000M1_scaffold_3285_19
unknown

Not on your lists

comp(7685..7783)
DNA (99bp) protein (33aa)

This feature has no annotations

L3_122_000M1_scaffold_3285_20
unknown

Not on your lists

comp(7856..8188)
DNA (333bp) protein (111aa)

This feature has no annotations

L3_122_000M1_scaffold_3285_21
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8360..8659
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N557_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY99145.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
L3_122_000M1_scaffold_3285_22
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8834..10012
DNA (1179bp) protein (393aa)
Phage integrase family n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LPN8_9FIRM
Phage integrase family.
Phage integrase family {ECO:0000313|EMBL:CBL18539.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L3_122_000M1_scaffold_3285_23
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10339..10575)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CI48_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77706.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L3_122_000M1_scaffold_3285_24
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10751..11062)
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J931_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78833.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L3_122_000M1_scaffold_3285_25
Blautia hydrogenotrophica CAG:147, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11038..11616)
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Blautia hydrogenotrophica CAG:147 RepID=R5C5D3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX58816.1}; TaxID=1263061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia hydrogenotrophica CAG:147.;"
glycoside hydrolase family protein
L3_122_000M1_scaffold_3285_26
unknown

Not on your lists

comp(11638..11799)
DNA (162bp) protein (54aa)

This feature has no annotations

L3_122_000M1_scaffold_3285_27
unknown

Not on your lists

comp(11792..12031)
DNA (240bp) protein (80aa)

This feature has no annotations

L3_122_000M1_scaffold_3285_28

Not on your lists

comp(12113..13045)
DNA (933bp) protein (311aa)
Putative uncharacterized protein n=1 Tax=unidentified phage RepID=H7BUT6_9VIRU
Putative uncharacterized protein {ECO:0000313|EMBL:AFB75581.1}; TaxID=38018 species="Viruses; unclassified phages.;" source="unidentified phage.;"
hypothetical protein
L3_122_000M1_scaffold_3285_29
Enterobacteria phage vB_EcoM_VR25, T4likevirus, Caudovirales, Viruses

Not on your lists

comp(13056..14549)
DNA (1494bp) protein (498aa)
UPI0003DF4A91 related cluster n=1 Tax=unknown RepID=UPI0003DF4A91
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIZ02540.1}; TaxID=1567028 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae; Tevenvirinae; T4likevirus.;" source="Enterobacteria phage vB_EcoM_VR25.;"
L3_122_000M1_scaffold_3285_30
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14565..14765)
DNA (201bp) protein (67aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI000374B073
Uncharacterized protein {ECO:0000313|EMBL:KEI94424.1}; TaxID=1379740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum A2B3 87.;"
Displaying items 1-30 of 66 in total

View Taxonomy