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L3_122_000M1_scaffold_1041

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_122_000M1_scaffold_1041_1
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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230..1786
DNA (1557bp) protein (519aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5D360_BACPM
Uncharacterized protein {ECO:0000313|EMBL:EDY94010.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
Protein of unknown function (DUF1703)./Predicted AAA-ATPase.
L3_122_000M1_scaffold_1041_2
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1841..2692
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5W209_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ86807.1}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
beta-lactamase domain-containing protein
L3_122_000M1_scaffold_1041_3
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2980..4782
DNA (1803bp) protein (601aa)
TonB family domain protein n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5D369_BACPM
TonB family domain protein {ECO:0000313|EMBL:EDY94019.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
hypothetical protein
L3_122_000M1_scaffold_1041_4
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4821..5387
DNA (567bp) protein (189aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=B5D370_BACPM
Uncharacterized protein {ECO:0000313|EMBL:EDY94020.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
hypothetical protein
L3_122_000M1_scaffold_1041_5
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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5393..5872
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5D371_BACPM
Uncharacterized protein {ECO:0000313|EMBL:EDY94021.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
hypothetical protein
L3_122_000M1_scaffold_1041_6
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5950..6243
DNA (294bp) protein (98aa)
TonB family domain-containing protein n=1 Tax=Parabacteroides merdae CL09T00C40 RepID=K6A713_9PORP
Outer membrane protein TonB {ECO:0000313|EMBL:CCZ87184.1}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
TonB family protein
L3_122_000M1_scaffold_1041_7
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6304..7848
DNA (1545bp) protein (515aa)
TonB family domain protein n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5D374_BACPM
TonB family domain protein {ECO:0000313|EMBL:EDY94024.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
hypothetical protein
L3_122_000M1_scaffold_1041_8
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8184..10289)
DNA (2106bp) protein (702aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5W369_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ87182.1}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
outer membrane insertion signal domain-containing protein
L3_122_000M1_scaffold_1041_9
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(10381..11385)
DNA (1005bp) protein (335aa)
Transcriptional regulatory protein, C-terminal domain protein n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5D376_BACPM
Transcriptional regulatory protein, C-terminal domain protein {ECO:0000313|EMBL:EDY94026.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
transcriptional regulator domain-containing protein
L3_122_000M1_scaffold_1041_10
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11354..12214)
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5V9X7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ87180.1}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
AraC family transcriptional regulator
L3_122_000M1_scaffold_1041_11
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12482..13348
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5V9B7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ87178.1}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
short-chain dehydrogenase/reductase SDR
L3_122_000M1_scaffold_1041_12
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13362..14126)
DNA (765bp) protein (255aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=R5W363_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ87177.1}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
hypothetical protein
L3_122_000M1_scaffold_1041_13
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14137..15324)
DNA (1188bp) protein (396aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5VUF7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ87176.1}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
hypothetical protein
L3_122_000M1_scaffold_1041_14
Bacteroides sp. CAG:875, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15652..17760)
DNA (2109bp) protein (703aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:875 RepID=R7AF75_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDD52016.1}; TaxID=1262752 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:875.;"
Dockerin type 1
L3_122_000M1_scaffold_1041_15
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17867..18583)
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5VH16_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ87174.1}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
molybdopterin biosynthesis protein
L3_122_000M1_scaffold_1041_16
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18813..19964)
DNA (1152bp) protein (384aa)
Thiazole biosynthesis protein ThiH n=2 Tax=Bacteroides RepID=B5D389_BACPM
Uncharacterized protein {ECO:0000313|EMBL:CCZ87173.1}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
thiazole biosynthesis protein ThiH
L3_122_000M1_scaffold_1041_17
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20016..21716)
DNA (1701bp) protein (567aa)
Phosphomethylpyrimidine synthase {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007814}; EC=4.1.99.17 {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007809};; Hydroxymethylpyrimidine phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00089}; Thiamine biosynthesis protein ThiC {ECO:0000256|HAMAP-Rule:MF_00089}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
Phosphomethylpyrimidine synthase n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5W355_9BACE
Phosphomethylpyrimidine synthase
L3_122_000M1_scaffold_1041_18
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21776..22552)
DNA (777bp) protein (259aa)
Thiazole synthase {ECO:0000256|HAMAP-Rule:MF_00443}; EC=2.8.1.10 {ECO:0000256|HAMAP-Rule:MF_00443};; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
Thiazole synthase n=2 Tax=Bacteroides RepID=B5D391_BACPM
thiazole synthase
L3_122_000M1_scaffold_1041_19
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23064..23708)
DNA (645bp) protein (215aa)
Thiamine-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; Short=TP synthase {ECO:0000256|HAMAP-Rule:MF_00097};; Short=TPS {ECO:0000256|HAMAP-Rule:MF_00097};; EC=2.5.1.3 {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826};; Thiamine-phosphate pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
Thiamine-phosphate synthase n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5V9W9_9BACE
thiamine-phosphate pyrophosphorylase
L3_122_000M1_scaffold_1041_20
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24150..24773)
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5D395_BACPM
Uncharacterized protein {ECO:0000313|EMBL:EDY94045.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
hypothetical protein
L3_122_000M1_scaffold_1041_21
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24802..25548)
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5W351_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ87167.1}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
phosphoesterase
L3_122_000M1_scaffold_1041_22
Bacteroides sp. CAG:927, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25825..26274)
DNA (450bp) protein (150aa)
Cupin 2 conserved barrel domain protein n=1 Tax=Bacteroides sp. CAG:927 RepID=R5AZD4_9BACE
Cupin 2 conserved barrel domain protein {ECO:0000313|EMBL:CCX48403.1}; TaxID=1262753 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:927.;"
cupin
L3_122_000M1_scaffold_1041_23
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26438..27400)
DNA (963bp) protein (321aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5D397_BACPM
Uncharacterized protein {ECO:0000313|EMBL:EDY94047.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
hypothetical protein
L3_122_000M1_scaffold_1041_24
Bacteroides sp. CAG:927, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27762..28220
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:927 RepID=R5B4Q1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCX47917.1}; TaxID=1262753 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:927.;"
hypothetical protein
L3_122_000M1_scaffold_1041_25
Tannerella sp. CAG:118, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28244..28621)
DNA (378bp) protein (126aa)
Transcriptional regulator HxlR family n=1 Tax=Tannerella sp. CAG:118 RepID=R5IEB9_9PORP
Transcriptional regulator HxlR family {ECO:0000313|EMBL:CCY35101.1}; TaxID=1262978 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella; environmental samples.;" source="Tannerella sp. CAG:118.;"
HxlR family transcriptional regulator
L3_122_000M1_scaffold_1041_26
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28773..29279
DNA (507bp) protein (169aa)
Flavodoxin n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5V9A6_9BACE
Flavodoxin {ECO:0000256|PIRNR:PIRNR038996}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
flavodoxin
L3_122_000M1_scaffold_1041_27
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29325..29702
DNA (378bp) protein (126aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=B5D399_BACPM
Uncharacterized protein {ECO:0000313|EMBL:EDY94049.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
hypothetical protein
Displaying 27 items

View Taxonomy