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L3_122_000M1_scaffold_1119

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_122_000M1_scaffold_1119_1
unknown

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comp(93..464)
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:435 RepID=R6X7X4_9BACT
L3_122_000M1_scaffold_1119_2
Prevotella sp. CAG:1320, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1048..1287)
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Prevotella sp. CAG:1320 RepID=R6ET94_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDA93172.1}; TaxID=1262922 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:1320.;"
L3_122_000M1_scaffold_1119_3
unknown

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1386..1628
DNA (243bp) protein (81aa)

This feature has no annotations

L3_122_000M1_scaffold_1119_4
Prevotella multiformis, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1750..2148
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Prevotella multiformis DSM 16608 RepID=F0F7N7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EGC19730.1}; TaxID=888743 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella multiformis DSM 16608.;"
L3_122_000M1_scaffold_1119_5
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2285..3196)
DNA (912bp) protein (304aa)
Dihydroorotate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00224}; Short=DHOD {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHODase {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHOdehase {ECO:0000256|HAMAP-Rule:MF_00224};; EC=1.3.-.- {ECO:0000256|HAMAP-Rule:MF_00224};; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
dihydroorotate dehydrogenase (EC:1.3.98.1)
Dihydroorotate dehydrogenase n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5CVT3_BACPM
L3_122_000M1_scaffold_1119_6
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3184..3960)
DNA (777bp) protein (259aa)
Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit n=2 Tax=Bacteroides RepID=R5V732_9BACE
Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit {ECO:0000256|HAMAP-Rule:MF_01211}; Dihydroorotate oxidase B, electron transfer subunit {ECO:0000256|HAMAP-Rule:MF_01211}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
oxidoreductase FAD/NAD(P)-binding domain-containing protein
L3_122_000M1_scaffold_1119_7
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(4055..4510)
DNA (456bp) protein (152aa)
DNA-binding helix-turn-helix protein n=2 Tax=Bacteroides RepID=B5CVT5_BACPM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EDY96382.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
helix-turn-helix domain-containing protein
L3_122_000M1_scaffold_1119_8
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5213..6229)
DNA (1017bp) protein (339aa)
DNA polymerase III, delta subunit {ECO:0000313|EMBL:EDY96384.1}; EC=2.7.7.7 {ECO:0000313|EMBL:EDY96384.1};; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
DNA polymerase III, delta subunit n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5CVT7_BACPM
DNA polymerase III subunit delta
L3_122_000M1_scaffold_1119_9
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(6240..7016)
DNA (777bp) protein (259aa)
Putative AMP nucleosidase {ECO:0000313|EMBL:EDY96385.1}; EC=3.2.2.4 {ECO:0000313|EMBL:EDY96385.1};; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
AMP nucleosidase (EC:3.2.2.4)
Putative AMP nucleosidase n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5CVT8_BACPM
L3_122_000M1_scaffold_1119_10
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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7221..7670
DNA (450bp) protein (150aa)
Type I restriction enzyme HsdR protein N-terminal domain protein n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5CVU0_BACPM
Type I restriction enzyme HsdR protein N-terminal domain protein {ECO:0000313|EMBL:EDY96387.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
hypothetical protein
L3_122_000M1_scaffold_1119_11
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7738..8529)
DNA (792bp) protein (264aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=R5V728_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ86180.1}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
hypothetical protein
L3_122_000M1_scaffold_1119_12
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8536..9630)
DNA (1095bp) protein (365aa)
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
Putative GTP cyclohydrolase 1 type 2 n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5VE35_9BACE
NGG1p interacting factor 3 protein, NIF3
L3_122_000M1_scaffold_1119_13
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9814..10482)
DNA (669bp) protein (223aa)
KDPG and KHG aldolase n=2 Tax=Bacteroides RepID=B5CVU3_BACPM
Uncharacterized protein {ECO:0000313|EMBL:CCZ86178.1}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
KDPG and KHG aldolase
L3_122_000M1_scaffold_1119_14
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10521..11543)
DNA (1023bp) protein (341aa)
Kinase, PfkB family n=2 Tax=Bacteroides RepID=B5CVU4_BACPM
Uncharacterized protein {ECO:0000313|EMBL:CCZ86177.1}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
PfkB domain-containing protein
L3_122_000M1_scaffold_1119_15
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11761..12837
DNA (1077bp) protein (359aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5VRL3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ86176.1}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
transcriptional regulator, LacI family
L3_122_000M1_scaffold_1119_16
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12859..14352
DNA (1494bp) protein (498aa)
altronate dehydratase (EC:4.2.1.7)
SAF domain protein n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5CVU7_BACPM
SAF domain protein {ECO:0000313|EMBL:EDY96394.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
L3_122_000M1_scaffold_1119_17
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14517..16382)
DNA (1866bp) protein (622aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5VE31_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ86174.1}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
ABC transporter
L3_122_000M1_scaffold_1119_18
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16423..17247)
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5V6I5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDY96415.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
hypothetical protein
L3_122_000M1_scaffold_1119_19
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17282..17659)
DNA (378bp) protein (126aa)
Glyoxalase family protein n=2 Tax=Bacteroides RepID=B5CVW9_BACPM
Glyoxalase family protein {ECO:0000313|EMBL:EDY96416.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
lactoylglutathione lyase
L3_122_000M1_scaffold_1119_20
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17667..18413)
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5CVX0_BACPM
Uncharacterized protein {ECO:0000313|EMBL:EDY96417.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
metal dependent hydrolase
L3_122_000M1_scaffold_1119_21
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18426..19634)
DNA (1209bp) protein (403aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5V720_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ86170.1}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
hypothetical protein
L3_122_000M1_scaffold_1119_22
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19712..20089)
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5VE28_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ86169.1}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
endoribonuclease L-PSP
L3_122_000M1_scaffold_1119_23
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20387..22420
DNA (2034bp) protein (678aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
Transcription termination factor Rho n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5V6I1_9BACE
transcription termination factor Rho
L3_122_000M1_scaffold_1119_24
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22555..23109)
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5W072_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ86167.1}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
hypothetical protein
L3_122_000M1_scaffold_1119_25
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23459..24781)
DNA (1323bp) protein (441aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5VRK5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ86166.1}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
cobyrinic acid a,c-diamide synthase
L3_122_000M1_scaffold_1119_26
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24786..26453)
DNA (1668bp) protein (556aa)
Formate--tetrahydrofolate ligase {ECO:0000256|HAMAP-Rule:MF_01543}; EC=6.3.4.3 {ECO:0000256|HAMAP-Rule:MF_01543};; Formyltetrahydrofolate synthetase {ECO:0000256|HAMAP-Rule:MF_01543}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
Formate--tetrahydrofolate ligase (EC:6.3.4.3)
Formate--tetrahydrofolate ligase n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5CVX5_BACPM
L3_122_000M1_scaffold_1119_27
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26543..27718
DNA (1176bp) protein (392aa)
Alcohol dehydrogenase (NADP(+)) (EC:1.1.1.2)
Uncharacterized protein n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5VE25_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ86164.1}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
L3_122_000M1_scaffold_1119_28
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27731..28222
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5CVX7_BACPM
Uncharacterized protein {ECO:0000313|EMBL:EDY96424.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
pyridoxamine 5'-phosphate oxidase
Displaying 28 items

View Taxonomy