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L3_122_000M1_scaffold_1198

Search features with annotation key words

Displaying items 1-30 of 61 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_122_000M1_scaffold_1198_1
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2..427
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Bacteroides uniformis dnLKV2 RepID=R9HVJ9_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EOS07871.1}; TaxID=1235787 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis dnLKV2.;"
OmpA/MotB domain protein
L3_122_000M1_scaffold_1198_2
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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458..1306
DNA (849bp) protein (283aa)
Uncharacterized protein n=1 Tax=Bacteroides uniformis dnLKV2 RepID=R9HV33_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EOS07872.1}; TaxID=1235787 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis dnLKV2.;"
hypothetical protein
L3_122_000M1_scaffold_1198_3
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1423..1848
DNA (426bp) protein (142aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
Putative Holliday junction resolvase n=3 Tax=Bacteroides RepID=D2ETL6_9BACE
Holliday junction resolvase YqgF
L3_122_000M1_scaffold_1198_4
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1892..2449
DNA (558bp) protein (186aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
peptide deformylase (EC:3.5.1.88)
Peptide deformylase n=5 Tax=Bacteroides RepID=A7V3A7_BACUN
L3_122_000M1_scaffold_1198_5
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2567..4627
DNA (2061bp) protein (687aa)
Tetratricopeptide repeat protein n=2 Tax=Bacteroides RepID=A7V3A8_BACUN
SHNi-TPR family protein {ECO:0000313|EMBL:KDS51287.1}; TaxID=1339349 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis str. 3978 T3 ii.;"
hypothetical protein
L3_122_000M1_scaffold_1198_6
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4707..6647
DNA (1941bp) protein (647aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase (EC:3.1.1.- 6.1.1.3)
Threonine--tRNA ligase n=4 Tax=Bacteroides RepID=D2ETL9_9BACE
L3_122_000M1_scaffold_1198_7
Bacteroides eggerthii CAG:109, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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6723..7370
DNA (648bp) protein (216aa)
Translation initiation factor IF-3 n=2 Tax=Bacteroides RepID=R5K3J5_9BACE
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646}; TaxID=1263043 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides eggerthii CAG:109.;"
bacterial translation initiation factor 3 (bIF-3)
L3_122_000M1_scaffold_1198_8
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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7438..7635
DNA (198bp) protein (66aa)
50S ribosomal protein L35 n=6 Tax=Bacteroides RepID=A7V3B1_BACUN
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
50S ribosomal protein L35
L3_122_000M1_scaffold_1198_9
Bacteroides sp. CAG:633, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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7736..7966
DNA (231bp) protein (77aa)
50S ribosomal protein L20 n=1 Tax=Bacteroides sp. CAG:633 RepID=R6FI65_9BACE
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=1262744 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:633.;"
rplT; 50S ribosomal protein L20
L3_122_000M1_scaffold_1198_10
Bacteroides uniformis CAG:3, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8505..9812)
DNA (1308bp) protein (436aa)
Phenylacetate-coenzyme A ligase {ECO:0000256|PIRNR:PIRNR006444}; EC=6.2.1.30 {ECO:0000256|PIRNR:PIRNR006444};; Phenylacetyl-CoA ligase {ECO:0000256|PIRNR:PIRNR006444}; TaxID=1263055 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides uniformis CAG:3.;"
paaK2; putative phenylacetate-coenzyme A ligase (EC:6.2.1.30)
Uncharacterized protein n=6 Tax=Bacteroides RepID=A7V3B3_BACUN
L3_122_000M1_scaffold_1198_11
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9843..10424)
DNA (582bp) protein (194aa)
Indolepyruvate oxidoreductase subunit beta n=3 Tax=Bacteroides RepID=D2ETM4_9BACE
Pyruvate ferredoxin/flavodoxin oxidoreductase family protein {ECO:0000313|EMBL:KDS51292.1}; TaxID=1339349 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis str. 3978 T3 ii.;"
Pyruvate/ketoisovalerate oxidoreductase, catalytic domain protein
L3_122_000M1_scaffold_1198_12
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10429..12021)
DNA (1593bp) protein (531aa)
Indolepyruvate oxidoreductase subunit IorA {ECO:0000256|PIRNR:PIRNR006439}; Short=IOR {ECO:0000256|PIRNR:PIRNR006439};; EC=1.2.7.8 {ECO:0000256|PIRNR:PIRNR006439};; Indolepyruvate ferredoxin oxidoreductase subunit alpha {ECO:0000256|PIRNR:PIRNR006439}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
Putative indolepyruvate ferredoxin oxidoreductase, alpha subunit n=1 Tax=Bacteroides sp. D20 RepID=D2ETM5_9BACE
thiamine pyrophosphate TPP-binding domain-containing protein
L3_122_000M1_scaffold_1198_13
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12098..13129)
DNA (1032bp) protein (344aa)
UPF0755 protein n=1 Tax=Bacteroides uniformis dnLKV2 RepID=R9HV49_BACUN
UPF0755 protein {ECO:0000313|EMBL:EOS07883.1}; TaxID=1235787 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis dnLKV2.;"
aminodeoxychorismate lyase
L3_122_000M1_scaffold_1198_14
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13196..14221)
DNA (1026bp) protein (342aa)
WD40-like protein n=3 Tax=Bacteroides RepID=A7V3B7_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EFV26475.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
Tol biopolymer transport system periplasmic protein
L3_122_000M1_scaffold_1198_15
Bacteroides uniformis CAG:3, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14280..14435)
DNA (156bp) protein (52aa)
Uncharacterized protein n=1 Tax=Bacteroides uniformis CAG:3 RepID=R7EGU0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDE02124.1}; TaxID=1263055 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides uniformis CAG:3.;"
carbohydrate-binding family 6
L3_122_000M1_scaffold_1198_16
Bacteroides uniformis CAG:3, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14549..14854)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Bacteroides uniformis CAG:3 RepID=R7EHG0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDE02125.1}; TaxID=1263055 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides uniformis CAG:3.;"
Beta-xylosidase
L3_122_000M1_scaffold_1198_17
Bacteroides sp. CAG:754, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15525..15830)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:754 RepID=R6DH39_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDA83561.1}; TaxID=1262750 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:754.;"
L3_122_000M1_scaffold_1198_18
unknown

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15902..16150
DNA (249bp) protein (83aa)

This feature has no annotations

L3_122_000M1_scaffold_1198_19
Tannerella sp. CAG:118, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16203..16925)
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Tannerella sp. CAG:118 RepID=R5IG11_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCY39254.1}; TaxID=1262978 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella; environmental samples.;" source="Tannerella sp. CAG:118.;"
XRE family transcriptional regulator
L3_122_000M1_scaffold_1198_20
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17066..17329
DNA (264bp) protein (88aa)
Uncharacterized protein {ECO:0000313|EMBL:KDS19855.1}; TaxID=1339346 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus str. 3725 D1 iv.;"
L3_122_000M1_scaffold_1198_21
unknown

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17372..17542
DNA (171bp) protein (57aa)

This feature has no annotations

L3_122_000M1_scaffold_1198_22
unknown

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17617..17763
DNA (147bp) protein (49aa)

This feature has no annotations

L3_122_000M1_scaffold_1198_23
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17768..17995
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis HMW 616 RepID=K1FHH1_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EKA81149.1}; TaxID=1073388 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 616.;"
hypothetical protein
L3_122_000M1_scaffold_1198_24
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18007..18192
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis HMW 616 RepID=K1FJF3_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EKA81150.1}; TaxID=1073388 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 616.;"
L3_122_000M1_scaffold_1198_25
Bacteroides sp. HPS0048, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18170..18406
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. HPS0048 RepID=U6RK83_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOA55608.1}; TaxID=1078089 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. HPS0048.;"
L3_122_000M1_scaffold_1198_26
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18417..18923
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Bacteroides ovatus CL03T12C18 RepID=I8Y6S5_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY58052.1}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
uncharacterized protein
L3_122_000M1_scaffold_1198_27
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18904..19746
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Bacteroides ovatus CL03T12C18 RepID=I9SQ45_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY58053.1}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
L3_122_000M1_scaffold_1198_28
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19765..20214
DNA (450bp) protein (150aa)
Putative uncharacterized protein n=1 Tax=Bacteroides ovatus 3_8_47FAA RepID=F7L6B0_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EGN00221.1}; TaxID=665954 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus 3_8_47FAA.;"
hypothetical protein
L3_122_000M1_scaffold_1198_29
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20270..20605
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis HMW 616 RepID=K1FU36_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EKA81157.1}; TaxID=1073388 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 616.;"
hypothetical protein
L3_122_000M1_scaffold_1198_30
Bacteroides finegoldii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20760..21416
DNA (657bp) protein (219aa)
hypothetical protein n=1 Tax=Riemerella columbina RepID=UPI00037E2CD0
Uncharacterized protein {ECO:0000313|EMBL:EKJ91805.1}; TaxID=997888 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides finegoldii CL09T03C10.;"
hypothetical protein
Displaying items 1-30 of 61 in total

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