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L3_122_000M1_scaffold_1336

Search features with annotation key words

Displaying items 1-30 of 65 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_122_000M1_scaffold_1336_1
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(133..1029)
DNA (897bp) protein (299aa)
Uncharacterized protein n=3 Tax=root RepID=B0MUB3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDS03675.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
peptide deformylase
L3_122_000M1_scaffold_1336_2

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comp(1067..1480)
DNA (414bp) protein (138aa)
Holliday junction resolvase-like protein n=3 Tax=root RepID=K1UH58_9ZZZZ
Holliday junction resolvase-like protein {ECO:0000313|EMBL:EKC77625.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
RNAse H-fold protein YqgF
L3_122_000M1_scaffold_1336_3
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1527..2891)
DNA (1365bp) protein (455aa)
Glycine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00006545}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00015978};; Glycyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00253}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
glycyl-tRNA synthetase (EC:6.1.1.14)
Glycine--tRNA ligase n=3 Tax=root RepID=B0MUL7_9BACT
L3_122_000M1_scaffold_1336_4
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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3070..4410
DNA (1341bp) protein (447aa)
Uncharacterized protein n=2 Tax=root RepID=B0MUL5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDS03670.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
hypothetical protein
L3_122_000M1_scaffold_1336_5
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(4948..5592)
DNA (645bp) protein (215aa)
DNA repair protein RadC n=3 Tax=root RepID=B0MUL4_9BACT
DNA repair protein RadC {ECO:0000313|EMBL:EDS03669.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
DNA repair protein radc
L3_122_000M1_scaffold_1336_6
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(5589..6383)
DNA (795bp) protein (265aa)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease 3; Ribonuclease III {ECO:0000256|HAMAP-Rule:MF_00104}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
ribonuclease III (EC:3.1.26.3)
Ribonuclease 3 n=4 Tax=root RepID=B0MUL3_9BACT
L3_122_000M1_scaffold_1336_7
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(6399..7526)
DNA (1128bp) protein (376aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=3 Tax=root RepID=B0MUL2_9BACT
beta-ketoacyl-acyl-carrier-protein synthase II
L3_122_000M1_scaffold_1336_8
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(7569..7805)
DNA (237bp) protein (79aa)
Acyl carrier protein n=2 Tax=Alistipes RepID=B0MUL1_9BACT
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
acyl carrier protein
L3_122_000M1_scaffold_1336_9
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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7971..8672
DNA (702bp) protein (234aa)
Dipeptidase E n=3 Tax=root RepID=B0MUL0_9BACT
Dipeptidase E {ECO:0000313|EMBL:CDE63391.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
peptidase E
L3_122_000M1_scaffold_1336_10
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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8734..9189
DNA (456bp) protein (152aa)
Uncharacterized protein n=3 Tax=root RepID=B0MUK9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDE63394.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
lipopolysaccharide biosynthesis protein
L3_122_000M1_scaffold_1336_11
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9162..9743
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Alistipes putredinis CAG:67 RepID=R7JI44_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDE63396.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
lipopolysaccharide core biosynthesis protein LpsA
L3_122_000M1_scaffold_1336_12

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9740..10105
DNA (366bp) protein (122aa)
Protein containing Uncharacterized protein family UPF0102 domain protein (Fragment) n=2 Tax=human gut metagenome RepID=K1TQQ3_9ZZZZ
Protein containing Uncharacterized protein family UPF0102 domain protein {ECO:0000313|EMBL:EKC61656.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Predicted endonuclease distantly related to archaeal Holliday junction resolvase
L3_122_000M1_scaffold_1336_13
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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10173..11408
DNA (1236bp) protein (412aa)
3-deoxy-D-manno-octulosonic-acid transferase n=5 Tax=root RepID=B0MUK6_9BACT
3-deoxy-D-manno-octulosonic-acid transferase {ECO:0000313|EMBL:CDE63398.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
3-deoxy-D-manno-octulosonic-acid transferase
L3_122_000M1_scaffold_1336_14
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11585..12868)
DNA (1284bp) protein (428aa)
UPF0597 protein ALIPUT_00712 n=5 Tax=root RepID=B0MUK5_9BACT
UPF0597 protein BN752_00113 {ECO:0000256|HAMAP-Rule:MF_01845}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
hypothetical protein
L3_122_000M1_scaffold_1336_15
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13368..14033)
DNA (666bp) protein (222aa)
SagB-type dehydrogenase domain protein n=3 Tax=root RepID=B0MUK2_9BACT
SagB-type dehydrogenase domain protein {ECO:0000313|EMBL:EDS03657.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
nitroreductase
L3_122_000M1_scaffold_1336_16
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14634..15275
DNA (642bp) protein (214aa)
Uncharacterized protein n=2 Tax=root RepID=B0MUK0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDS03655.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
L3_122_000M1_scaffold_1336_17
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15291..15854
DNA (564bp) protein (188aa)
Uncharacterized protein n=3 Tax=root RepID=B0MUJ9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDS03654.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
L3_122_000M1_scaffold_1336_18
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15870..16976
DNA (1107bp) protein (369aa)
Uncharacterized protein n=2 Tax=root RepID=B0MUJ8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDS03653.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
hypothetical protein
L3_122_000M1_scaffold_1336_19
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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17166..18389
DNA (1224bp) protein (408aa)
Site-specific recombinase XerD n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YIQ0_ALIFI
site-specific recombinase XerD
Site-specific recombinase XerD {ECO:0000313|EMBL:AFL76868.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_122_000M1_scaffold_1336_20
unknown

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18406..18678
DNA (273bp) protein (91aa)

This feature has no annotations

L3_122_000M1_scaffold_1336_21

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comp(18820..19374)
DNA (555bp) protein (185aa)
Filamentation induced by cAMP protein Fic (Fragment) n=1 Tax=human gut metagenome RepID=K1U2P4_9ZZZZ
Filamentation induced by cAMP protein Fic {ECO:0000313|EMBL:EKC65781.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L3_122_000M1_scaffold_1336_22

Not on your lists

19583..19855
DNA (273bp) protein (91aa)
Uncharacterized protein n=2 Tax=human gut metagenome RepID=K1SMD3_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC58728.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L3_122_000M1_scaffold_1336_23

Not on your lists

19933..20175
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=human gut metagenome RepID=K1SGM5_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC56753.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L3_122_000M1_scaffold_1336_24
unknown

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20187..20357
DNA (171bp) protein (57aa)

This feature has no annotations

L3_122_000M1_scaffold_1336_25
unknown

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20302..20613
DNA (312bp) protein (104aa)

This feature has no annotations

L3_122_000M1_scaffold_1336_26
unknown

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20627..20839
DNA (213bp) protein (71aa)

This feature has no annotations

L3_122_000M1_scaffold_1336_27
unknown

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20851..21024
DNA (174bp) protein (58aa)

This feature has no annotations

L3_122_000M1_scaffold_1336_28
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21021..21200
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MXA9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDS02129.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
hypothetical protein
L3_122_000M1_scaffold_1336_29
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21213..21434
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MWS6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDS03368.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
L3_122_000M1_scaffold_1336_30
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21587..21943
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YIP8_ALIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL76866.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
Displaying items 1-30 of 65 in total

View Taxonomy