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L3_122_000M1_scaffold_1408

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_122_000M1_scaffold_1408_1
Bacteroides sp. 3_1_23, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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3..407
DNA (405bp) protein (135aa)
Putative DNA methylase n=1 Tax=Bacteroides sp. 3_1_23 RepID=D7JYQ6_9BACE
Putative DNA methylase {ECO:0000313|EMBL:EFI39605.1}; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
hypothetical protein
L3_122_000M1_scaffold_1408_2
Bacteroides sp. 3_1_23, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(564..893)
DNA (330bp) protein (110aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 3_1_23 RepID=D7JYQ5_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFI39604.1}; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
hypothetical protein
L3_122_000M1_scaffold_1408_3
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(890..1195)
DNA (306bp) protein (102aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=B0NMS3_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EIY17514.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L3_122_000M1_scaffold_1408_4
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1702..3276)
DNA (1575bp) protein (525aa)
S1 RNA binding domain protein n=2 Tax=Bacteroides RepID=B5D2W3_BACPM
S1 RNA binding domain protein {ECO:0000313|EMBL:EDY93913.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
ribonuclease, Rne/Rng family
L3_122_000M1_scaffold_1408_5
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3421..3720)
DNA (300bp) protein (100aa)
DNA-binding protein HU n=3 Tax=Bacteroides RepID=B5D2W4_BACPM
DNA-binding protein HU {ECO:0000313|EMBL:EDY93914.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
hup1; putative histone-like DNA-binding protein HU1
L3_122_000M1_scaffold_1408_6
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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3929..4993
DNA (1065bp) protein (355aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5V7X6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ86683.1}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
A/G-specific adenine glycosylase
L3_122_000M1_scaffold_1408_7
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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4998..5429
DNA (432bp) protein (144aa)
Single-stranded DNA-binding protein n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5D2W6_BACPM
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
single-strand binding protein
L3_122_000M1_scaffold_1408_8
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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5473..6834
DNA (1362bp) protein (454aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5VT24_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ86681.1}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
hemolysin
L3_122_000M1_scaffold_1408_9
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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6837..7496
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5V8H5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ86680.1}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
hypothetical protein
L3_122_000M1_scaffold_1408_10
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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7521..10517
DNA (2997bp) protein (999aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5VFH3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ86679.1}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
hypothetical protein
L3_122_000M1_scaffold_1408_11
Bacteroides nordii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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10619..12136
DNA (1518bp) protein (506aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I9RZQ4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY48721.1}; TaxID=997884 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides nordii CL02T12C05.;"
H+/peptide symporter
L3_122_000M1_scaffold_1408_12
Bacteroides coprophilus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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12374..13555
DNA (1182bp) protein (394aa)
Uncharacterized protein n=1 Tax=Bacteroides coprophilus DSM 18228 = JCM 13818 RepID=S0F901_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEF76854.1}; TaxID=547042 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprophilus DSM 18228 = JCM 13818.;"
L3_122_000M1_scaffold_1408_13
Bacteroides coprocola, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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13873..15357
DNA (1485bp) protein (495aa)
Uncharacterized protein n=1 Tax=Bacteroides coprocola DSM 17136 RepID=B3JDS8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDV02835.1}; TaxID=470145 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprocola DSM 17136.;"
L3_122_000M1_scaffold_1408_14
Bacteroides coprocola, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15391..16185
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Bacteroides coprocola DSM 17136 RepID=B3JDS9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDV02836.1}; TaxID=470145 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprocola DSM 17136.;"
L3_122_000M1_scaffold_1408_15
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16366..18147)
DNA (1782bp) protein (594aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5D2X1_BACPM
integral membrane sensor signal transduction histidine kinase
L3_122_000M1_scaffold_1408_16
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18165..18851)
DNA (687bp) protein (229aa)
Response regulator receiver domain protein n=2 Tax=Bacteroides RepID=B5D2X2_BACPM
Uncharacterized protein {ECO:0000313|EMBL:CCZ86670.1}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
two component transcriptional regulator, winged helix family
L3_122_000M1_scaffold_1408_17
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(18955..20004)
DNA (1050bp) protein (350aa)
L-asparaginase, type I {ECO:0000313|EMBL:EDY93923.1}; EC=3.5.1.1 {ECO:0000313|EMBL:EDY93923.1};; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
type I L-asparaginase (EC:3.1.1.47)
L-asparaginase, type I n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5D2X3_BACPM
L3_122_000M1_scaffold_1408_18
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20091..20870)
DNA (780bp) protein (260aa)
Tryptophan synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|SAAS:SAAS00031177}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|SAAS:SAAS00108586};; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
Tryptophan synthase alpha chain n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5V7W5_9BACE
tryptophan synthase subunit alpha
L3_122_000M1_scaffold_1408_19
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20883..21506)
DNA (624bp) protein (208aa)
N-(5'-phosphoribosyl)anthranilate isomerase {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123216}; Short=PRAI {ECO:0000256|HAMAP-Rule:MF_00135};; EC=5.3.1.24 {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123176};; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
N-(5'-phosphoribosyl)anthranilate isomerase n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5W1L2_9BACE
N-(5'-phosphoribosyl)anthranilate isomerase
L3_122_000M1_scaffold_1408_20
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21503..22291)
DNA (789bp) protein (263aa)
Indole-3-glycerol phosphate synthase {ECO:0000256|SAAS:SAAS00046689}; EC=4.1.1.48 {ECO:0000256|SAAS:SAAS00046705};; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
Indole-3-glycerol phosphate synthase n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5D2X6_BACPM
indole-3-glycerol phosphate synthase
L3_122_000M1_scaffold_1408_21
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22299..23294)
DNA (996bp) protein (332aa)
Anthranilate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083107}; EC=2.4.2.18 {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083113};; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
Anthranilate phosphoribosyltransferase n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5D2X7_BACPM
anthranilate phosphoribosyltransferase
L3_122_000M1_scaffold_1408_22
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23337..23903)
DNA (567bp) protein (189aa)
glutamine amidotransferase of anthranilate synthase (EC:4.1.3.27)
Glutamine amidotransferase, class I n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5D2X8_BACPM
Glutamine amidotransferase, class I {ECO:0000313|EMBL:EDY93928.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
L3_122_000M1_scaffold_1408_23
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23910..25310)
DNA (1401bp) protein (467aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5V7W3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ86663.1}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
anthranilate synthase subunit I
L3_122_000M1_scaffold_1408_24
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25323..26519)
DNA (1197bp) protein (399aa)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
tryptophan synthase subunit beta (EC:4.2.1.20)
Tryptophan synthase beta chain n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5D2Y0_BACPM
Displaying 24 items

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