ggKbase home page

L3_122_000M1_scaffold_1490

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_122_000M1_scaffold_1490_1
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

121..1644
DNA (1524bp) protein (508aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K5ZIH1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX78053.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
hypothetical protein
L3_122_000M1_scaffold_1490_2
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1697..2578)
DNA (882bp) protein (294aa)
Transcriptional regulator, AraC family n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5CXD1_BACPM
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EDY96066.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
transcriptional regulator
L3_122_000M1_scaffold_1490_3
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2781..5576
DNA (2796bp) protein (932aa)
Glycosyl hydrolase family 2, sugar binding domain protein n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5CXD3_BACPM
Glycosyl hydrolase family 2, sugar binding domain protein {ECO:0000313|EMBL:EDY96068.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
putative beta-galactosidase
L3_122_000M1_scaffold_1490_4
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5662..7068
DNA (1407bp) protein (469aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5CXD4_BACPM
Uncharacterized protein {ECO:0000313|EMBL:EDY96069.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
Sialic acid-specific 9-O-acetylesterase
L3_122_000M1_scaffold_1490_5
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7065..9284
DNA (2220bp) protein (740aa)
Bacterial alpha-L-rhamnosidase n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5CXD5_BACPM
Bacterial alpha-L-rhamnosidase {ECO:0000313|EMBL:EDY96070.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
hypothetical protein
L3_122_000M1_scaffold_1490_6
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9464..11941)
DNA (2478bp) protein (826aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5VD62_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ88528.1}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
ferrous iron transport protein B
L3_122_000M1_scaffold_1490_7
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12070..13350
DNA (1281bp) protein (427aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine synthetase {ECO:0000256|HAMAP-Rule:MF_01161}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
tRNA(Ile)-lysidine synthase n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5VL73_9BACE
tRNA(Ile)-lysidine synthase
L3_122_000M1_scaffold_1490_8
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13467..13643
DNA (177bp) protein (59aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=B5CZR4_BACPM
Uncharacterized protein {ECO:0000313|EMBL:EDY95945.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
hypothetical protein
L3_122_000M1_scaffold_1490_9
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13799..18223
DNA (4425bp) protein (1475aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5CZR5_BACPM
histidine kinase
L3_122_000M1_scaffold_1490_10
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18255..18977
DNA (723bp) protein (241aa)
Response regulator receiver domain protein n=2 Tax=Bacteroides RepID=B5CZR6_BACPM
Uncharacterized protein {ECO:0000313|EMBL:CCZ88532.1}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
response regulator receiver protein
L3_122_000M1_scaffold_1490_11
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18967..19650
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5VD67_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ88533.1}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
efflux pump protein
L3_122_000M1_scaffold_1490_12
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19727..20827
DNA (1101bp) protein (367aa)
Antioxidant, AhpC/TSA family {ECO:0000313|EMBL:EDY95949.1}; EC=1.11.1.15 {ECO:0000313|EMBL:EDY95949.1};; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
Antioxidant, AhpC/TSA family n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5CZR8_BACPM
alkyl hydroperoxide reductase
L3_122_000M1_scaffold_1490_13
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20921..22465)
DNA (1545bp) protein (515aa)
Amino acid/peptide transporter n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5CZR9_BACPM
Amino acid/peptide transporter {ECO:0000313|EMBL:EDY95950.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
di-tripeptide ABC transporter
L3_122_000M1_scaffold_1490_14
Bacteroides intestinalis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22487..22639)
DNA (153bp) protein (51aa)
Uncharacterized protein n=1 Tax=Bacteroides intestinalis DSM 17393 RepID=B3CCR7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDV03085.1}; TaxID=471870 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides intestinalis DSM 17393.;"
Displaying 14 items

View Taxonomy