ggKbase home page

L3_122_000M1_scaffold_2

Search features with annotation key words

Displaying items 1-30 of 243 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_122_000M1_scaffold_2_1
Acidaminococcus intestini, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(302..1045)
DNA (744bp) protein (248aa)
Uncharacterized protein n=3 Tax=Acidaminococcus RepID=G4Q2R5_ACIIR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEQ22721.1}; TaxID=568816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus intestini (strain RyC-MR95).;"
L3_122_000M1_scaffold_2_2
Acidaminococcus sp. BV3L6, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(1042..1449)
DNA (408bp) protein (136aa)
Uncharacterized protein n=4 Tax=Acidaminococcus RepID=G4Q2R4_ACIIR
Uncharacterized protein {ECO:0000313|EMBL:ERL20107.1}; TaxID=1111120 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus sp. BV3L6.;"
hypothetical protein
L3_122_000M1_scaffold_2_3
Acidaminococcus intestini, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(1682..2740)
DNA (1059bp) protein (353aa)
bioB; radical SAM family protein (EC:2.8.1.6)
Radical SAM family protein n=4 Tax=Acidaminococcus RepID=G4Q2R2_ACIIR
Radical SAM family protein {ECO:0000313|EMBL:AEQ22718.1}; TaxID=568816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus intestini (strain RyC-MR95).;"
L3_122_000M1_scaffold_2_4
Acidaminococcus intestini, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

3201..3743
DNA (543bp) protein (181aa)
Nitroreductase n=4 Tax=Acidaminococcus RepID=G4Q2R1_ACIIR
nitroreductase
Nitroreductase {ECO:0000313|EMBL:AEQ22717.1}; TaxID=568816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus intestini (strain RyC-MR95).;"
L3_122_000M1_scaffold_2_5
Acidaminococcus intestini, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

4004..5581
DNA (1578bp) protein (526aa)
Uncharacterized protein n=4 Tax=Acidaminococcus RepID=G4Q2R0_ACIIR
Uncharacterized protein {ECO:0000313|EMBL:AEQ22716.1}; TaxID=568816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus intestini (strain RyC-MR95).;"
hypothetical protein
L3_122_000M1_scaffold_2_6
Acidaminococcus intestini, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

5578..6885
DNA (1308bp) protein (436aa)
Uncharacterized protein n=5 Tax=Acidaminococcus RepID=G4Q2Q9_ACIIR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEQ22715.1}; TaxID=568816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus intestini (strain RyC-MR95).;"
L3_122_000M1_scaffold_2_7
Acidaminococcus intestini, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

6923..9193
DNA (2271bp) protein (757aa)
DEAD/DEAH helicase n=5 Tax=Acidaminococcus RepID=G4Q2Q8_ACIIR
DEAD/DEAH box helicase
DEAD/DEAH helicase {ECO:0000313|EMBL:AEQ22714.1}; TaxID=568816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus intestini (strain RyC-MR95).;"
L3_122_000M1_scaffold_2_8
Acidaminococcus intestini, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

9210..10091
DNA (882bp) protein (294aa)
Drug-metabolite exporter n=3 Tax=Acidaminococcus RepID=G4Q2Q7_ACIIR
drug-metabolite exporter
Drug-metabolite exporter {ECO:0000313|EMBL:AEQ22713.1}; TaxID=568816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus intestini (strain RyC-MR95).;"
L3_122_000M1_scaffold_2_9
Acidaminococcus intestini CAG:325, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

11155..11292
DNA (138bp) protein (46aa)
Uncharacterized protein n=3 Tax=Acidaminococcus RepID=C0WD24_9FIRM
Transposase {ECO:0000313|EMBL:CDB93683.1}; TaxID=1263033 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus; environmental samples.;" source="Acidaminococcus intestini CAG:325.;"
transposase
L3_122_000M1_scaffold_2_10
Acidaminococcus intestini, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(11713..12117)
DNA (405bp) protein (135aa)
Uncharacterized protein n=5 Tax=Acidaminococcus RepID=G4Q2Q5_ACIIR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEQ22711.1}; TaxID=568816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus intestini (strain RyC-MR95).;"
L3_122_000M1_scaffold_2_11
Acidaminococcus intestini CAG:325, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

12339..12440
DNA (102bp) protein (34aa)
Uncharacterized protein n=2 Tax=Acidaminococcus RepID=R6MHB4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB93681.1}; TaxID=1263033 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus; environmental samples.;" source="Acidaminococcus intestini CAG:325.;"
L3_122_000M1_scaffold_2_12
Acidaminococcus intestini CAG:325, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

12454..14064
DNA (1611bp) protein (537aa)
ggt; gamma-glutamyltransferase (EC:2.3.2.2)
Gamma-glutamyltransferase n=3 Tax=Acidaminococcus RepID=R6M5E7_9FIRM
Gamma-glutamyltransferase {ECO:0000313|EMBL:CDB93680.1}; TaxID=1263033 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus; environmental samples.;" source="Acidaminococcus intestini CAG:325.;"
L3_122_000M1_scaffold_2_13
Acidaminococcus intestini, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

14079..14357
DNA (279bp) protein (93aa)
Uncharacterized protein n=4 Tax=Acidaminococcus RepID=G4Q2Q3_ACIIR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEQ22709.1}; TaxID=568816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus intestini (strain RyC-MR95).;"
L3_122_000M1_scaffold_2_14
Acidaminococcus intestini, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(14419..15207)
DNA (789bp) protein (263aa)
N-acetylglucosamine metabolism protein n=5 Tax=Acidaminococcus RepID=G4Q2Q2_ACIIR
N-acetylglucosamine metabolism protein
N-acetylglucosamine metabolism protein {ECO:0000313|EMBL:AEQ22708.1}; TaxID=568816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus intestini (strain RyC-MR95).;"
L3_122_000M1_scaffold_2_15
Acidaminococcus intestini CAG:325, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

15452..16822
DNA (1371bp) protein (457aa)
Transporter n=3 Tax=Acidaminococcus RepID=R6N6U4_9FIRM
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=1263033 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus; environmental samples.;" source="Acidaminococcus intestini CAG:325.;"
hypothetical protein
L3_122_000M1_scaffold_2_16
Acidaminococcus intestini, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

16956..17366
DNA (411bp) protein (137aa)
MarR-family transcriptional regulator n=5 Tax=Acidaminococcus RepID=G4Q2Q0_ACIIR
marR-family transcriptional regulator
MarR-family transcriptional regulator {ECO:0000313|EMBL:AEQ22706.1}; TaxID=568816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus intestini (strain RyC-MR95).;"
L3_122_000M1_scaffold_2_17
Acidaminococcus intestini, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

17380..18225
DNA (846bp) protein (282aa)
Uncharacterized protein n=5 Tax=Acidaminococcus RepID=G4Q2P9_ACIIR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEQ22705.1}; TaxID=568816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus intestini (strain RyC-MR95).;"
L3_122_000M1_scaffold_2_18
Acidaminococcus intestini, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

18743..19948
DNA (1206bp) protein (402aa)
Sodium-dicarboxylate symporter n=4 Tax=Acidaminococcus RepID=G4Q2P8_ACIIR
sodium-dicarboxylate symporter
Sodium-dicarboxylate symporter {ECO:0000313|EMBL:AEQ22704.1}; TaxID=568816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus intestini (strain RyC-MR95).;"
L3_122_000M1_scaffold_2_19
Acidaminococcus intestini, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

20965..22017
DNA (1053bp) protein (351aa)
Uncharacterized protein n=5 Tax=Acidaminococcus RepID=G4Q2P7_ACIIR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEQ22703.1}; TaxID=568816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus intestini (strain RyC-MR95).;"
L3_122_000M1_scaffold_2_20
Acidaminococcus intestini CAG:325, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

22049..23053
DNA (1005bp) protein (335aa)
gapA; glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.12)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=1263033 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus; environmental samples.;" source="Acidaminococcus intestini CAG:325.;"
Glyceraldehyde-3-phosphate dehydrogenase n=5 Tax=Acidaminococcus RepID=G4Q2P6_ACIIR
L3_122_000M1_scaffold_2_21
Acidaminococcus intestini, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

23074..24999
DNA (1926bp) protein (642aa)
Phosphoglycerate kinase {ECO:0000256|SAAS:SAAS00041088}; EC=2.7.2.3 {ECO:0000256|SAAS:SAAS00041088};; TaxID=568816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus intestini (strain RyC-MR95).;"
pgk; phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase n=3 Tax=Acidaminococcus RepID=G4Q2P5_ACIIR
L3_122_000M1_scaffold_2_22
Acidaminococcus intestini, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

25008..26540
DNA (1533bp) protein (511aa)
gpm; phosphoglycerate mutase (EC:5.4.2.1)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058362}; Short=BPG-independent PGAM {ECO:0000256|HAMAP-Rule:MF_01038};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01038};; Short=iPGM {ECO:0000256|HAMAP-Rule:MF_01038};; EC=5.4.2.12 {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058367};; TaxID=568816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus intestini (strain RyC-MR95).;"
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=5 Tax=Acidaminococcus RepID=G4Q2P4_ACIIR
L3_122_000M1_scaffold_2_23
Acidaminococcus sp. BV3L6, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

26569..27852
DNA (1284bp) protein (428aa)
eno; phosphopyruvate hydratase (EC:4.2.1.11)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; TaxID=1111120 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus sp. BV3L6.;"
Enolase n=5 Tax=Acidaminococcus RepID=G4Q2P3_ACIIR
L3_122_000M1_scaffold_2_24
Acidaminococcus sp. D21, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

28348..30177
DNA (1830bp) protein (610aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164, ECO:0000256|SAAS:SAAS00039584}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; GFAT {ECO:0000256|HAMAP-Rule:MF_00164}; Glucosamine-6-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00164}; Hexosephosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; L-glutamine--D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; TaxID=563191 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus sp. D21.;"
glmS; glucosamine-fructose-6-phosphate aminotransferase (EC:2.6.1.16)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=4 Tax=Acidaminococcus RepID=G4Q2P2_ACIIR
L3_122_000M1_scaffold_2_25
Acidaminococcus sp. D21, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

30349..30726
DNA (378bp) protein (126aa)
Transcriptional regulator n=5 Tax=Acidaminococcus RepID=G4Q2P1_ACIIR
Iron dependent repressor DNA binding domain protein {ECO:0000313|EMBL:EEH90991.1}; TaxID=563191 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus sp. D21.;"
transcriptional regulator
L3_122_000M1_scaffold_2_26
Acidaminococcus intestini, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

30852..31187
DNA (336bp) protein (112aa)
Uncharacterized protein n=5 Tax=Acidaminococcus RepID=G4Q2P0_ACIIR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEQ22696.1}; TaxID=568816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus intestini (strain RyC-MR95).;"
L3_122_000M1_scaffold_2_27
Acidaminococcus intestini, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

31184..32101
DNA (918bp) protein (306aa)
murB; UDP-N-acetylmuramate dehydrogenase (EC:1.1.1.158)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-acetylmuramate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00037}; TaxID=568816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus intestini (strain RyC-MR95).;"
UDP-N-acetylenolpyruvoylglucosamine reductase n=5 Tax=Acidaminococcus RepID=G4Q2N9_ACIIR
L3_122_000M1_scaffold_2_28
Acidaminococcus intestini, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

32117..33043
DNA (927bp) protein (309aa)
Permease n=5 Tax=Acidaminococcus RepID=G4Q2N8_ACIIR
permease
Permease {ECO:0000313|EMBL:AEQ22694.1}; TaxID=568816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus intestini (strain RyC-MR95).;"
L3_122_000M1_scaffold_2_29
Acidaminococcus sp. BV3L6, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

33056..33421
DNA (366bp) protein (122aa)
glyoxalase (EC:4.4.1.5)
Glyoxalase n=5 Tax=Acidaminococcus RepID=G4Q2N7_ACIIR
Glyoxalase-like domain protein {ECO:0000313|EMBL:ERL20054.1}; TaxID=1111120 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus sp. BV3L6.;"
L3_122_000M1_scaffold_2_30
Acidaminococcus intestini, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

33454..33816
DNA (363bp) protein (121aa)
Uncharacterized protein n=5 Tax=Acidaminococcus RepID=G4Q2N6_ACIIR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEQ22692.1}; TaxID=568816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus intestini (strain RyC-MR95).;"
Displaying items 1-30 of 243 in total

View Taxonomy