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L3_122_000M1_scaffold_4

Search features with annotation key words

Displaying items 1-30 of 238 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_122_000M1_scaffold_4_1
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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109..1149
DNA (1041bp) protein (347aa)
A/G-specific DNA-adenine glycosylase (EC:3.2.2.-)
adenine glycosylase n=1 Tax=Alistipes onderdonkii RepID=UPI00035DF674
A/G-specific adenine glycosylase {ECO:0000313|EMBL:CDD26460.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
L3_122_000M1_scaffold_4_2
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1125..2138)
DNA (1014bp) protein (338aa)
Putative K+-dependent Na+/Ca+ exchanger n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y535_9BACT
Putative K+-dependent Na+/Ca+ exchanger {ECO:0000313|EMBL:CDD26459.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
K+dependent Na+ exchanger-like protein
L3_122_000M1_scaffold_4_3
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2143..2943)
DNA (801bp) protein (267aa)
Zinc transporter ZupT n=1 Tax=Alistipes sp. CAG:29 RepID=R6XRW5_9BACT
Zinc transporter ZupT {ECO:0000256|HAMAP-Rule:MF_00548, ECO:0000256|SAAS:SAAS00012146}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
divalent heavy-metal cations transporter
L3_122_000M1_scaffold_4_4
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3233..4099)
DNA (867bp) protein (289aa)
hydrolase n=1 Tax=Alistipes onderdonkii RepID=UPI0003819B59
HAD superfamily sugar phosphatase
Putative sugar phosphatase of HAD superfamily {ECO:0000313|EMBL:AFL78579.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_122_000M1_scaffold_4_5
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4104..5000)
DNA (897bp) protein (299aa)
Glycerophosphoryl diester phosphodiesterase n=1 Tax=Alistipes sp. CAG:29 RepID=R6YCW8_9BACT
Glycerophosphoryl diester phosphodiesterase {ECO:0000313|EMBL:CDD26456.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
glycerophosphoryl diester phosphodiesterase
L3_122_000M1_scaffold_4_6
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5089..6264)
DNA (1176bp) protein (392aa)
Ser/Thr phosphatase family protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6XXU9_9BACT
Ser/Thr phosphatase family protein {ECO:0000313|EMBL:CDD26455.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
phosphohydrolase
L3_122_000M1_scaffold_4_7
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6320..7876)
DNA (1557bp) protein (519aa)
hypothetical protein n=1 Tax=Alistipes onderdonkii RepID=UPI0003652786
Ser/Thr phosphatase family protein {ECO:0000313|EMBL:CDD26454.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
phosphohydrolase
L3_122_000M1_scaffold_4_8
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7951..9720)
DNA (1770bp) protein (590aa)
RagB/SusD family protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6XRW1_9BACT
RagB/SusD family protein {ECO:0000313|EMBL:CDD26453.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
RagB/SusD family protein
L3_122_000M1_scaffold_4_9
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9734..13042)
DNA (3309bp) protein (1103aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6Z7H2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD26452.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
Outer membrane receptor for ferrienterochelin and colicins
L3_122_000M1_scaffold_4_10
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13684..16626
DNA (2943bp) protein (981aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6YCW2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD26451.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
L3_122_000M1_scaffold_4_11
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16865..18205
DNA (1341bp) protein (447aa)
Glycerol dehydrogenase-like oxidoreductase n=1 Tax=Alistipes sp. CAG:29 RepID=R6XXU3_9BACT
Glycerol dehydrogenase-like oxidoreductase {ECO:0000313|EMBL:CDD26450.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
glycerol dehydrogenase
L3_122_000M1_scaffold_4_12
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18245..19699
DNA (1455bp) protein (485aa)
sugar phosphate permease n=1 Tax=Alistipes onderdonkii RepID=UPI000370287E
Sugar phosphate permease {ECO:0000313|EMBL:CDD26449.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
sugar phosphate permease
L3_122_000M1_scaffold_4_13
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19843..20616
DNA (774bp) protein (258aa)
Transcriptional regulator DeoR family n=1 Tax=Alistipes sp. CAG:29 RepID=R6XRV6_9BACT
Transcriptional regulator DeoR family {ECO:0000313|EMBL:CDD26448.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
sugar metabolism transcriptional regulator
L3_122_000M1_scaffold_4_14
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20933..22204
DNA (1272bp) protein (424aa)
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00220, ECO:0000256|SAAS:SAAS00252556}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00220};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00220, ECO:0000256|SAAS:SAAS00088289};; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
Dihydroorotase n=1 Tax=Alistipes sp. CAG:29 RepID=R6Z7G7_9BACT
dihydroorotase
L3_122_000M1_scaffold_4_15
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22207..23298
DNA (1092bp) protein (364aa)
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000256|HAMAP-Rule:MF_01209}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
Carbamoyl-phosphate synthase small chain n=1 Tax=Alistipes sp. CAG:29 RepID=R6YCV6_9BACT
carbamoyl-phosphate synthase small subunit
L3_122_000M1_scaffold_4_16
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23291..26473
DNA (3183bp) protein (1061aa)
Carbamoyl-phosphate synthase large chain {ECO:0000256|HAMAP-Rule:MF_01210}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01210};; Carbamoyl-phosphate synthetase ammonia chain {ECO:0000256|HAMAP-Rule:MF_01210}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
Carbamoyl-phosphate synthase large chain n=1 Tax=Alistipes sp. CAG:29 RepID=R6XXT7_9BACT
carbamoyl-phosphate synthase large subunit
L3_122_000M1_scaffold_4_17
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26510..27250
DNA (741bp) protein (247aa)
Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y521_9BACT
Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit {ECO:0000256|HAMAP-Rule:MF_01211}; Dihydroorotate oxidase B, electron transfer subunit {ECO:0000256|HAMAP-Rule:MF_01211}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
2-polyprenylphenol 6-hydroxylase
L3_122_000M1_scaffold_4_18
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27244..28203
DNA (960bp) protein (320aa)
Dihydroorotate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00224}; Short=DHOD {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHODase {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHOdehase {ECO:0000256|HAMAP-Rule:MF_00224};; EC=1.3.-.- {ECO:0000256|HAMAP-Rule:MF_00224};; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
dihydroorotate dehydrogenase n=1 Tax=Alistipes onderdonkii RepID=UPI00036F8C09
dihydroorotate dehydrogenase family protein
L3_122_000M1_scaffold_4_19
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28200..28925
DNA (726bp) protein (242aa)
Orotidine 5'-phosphate decarboxylase {ECO:0000256|HAMAP-Rule:MF_01200, ECO:0000256|RuleBase:RU000512}; EC=4.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01200, ECO:0000256|RuleBase:RU000512};; OMP decarboxylase {ECO:0000256|HAMAP-Rule:MF_01200}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
orotidine-5'-phosphate decarboxylase (EC:4.1.1.23)
orotidine 5''''-phosphate decarboxylase n=1 Tax=Alistipes onderdonkii RepID=UPI000373417E
L3_122_000M1_scaffold_4_20
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28957..29217
DNA (261bp) protein (87aa)
Glutaredoxin n=1 Tax=Alistipes sp. CAG:29 RepID=R6YCU9_9BACT
Glutaredoxin {ECO:0000313|EMBL:CDD26441.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
Glutaredoxin.
L3_122_000M1_scaffold_4_21
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29288..30373
DNA (1086bp) protein (362aa)
Peptidase family S41 n=1 Tax=Alistipes sp. CAG:29 RepID=R6XXT1_9BACT
Peptidase family S41 {ECO:0000313|EMBL:CDD26440.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
Peptidase family S41.
L3_122_000M1_scaffold_4_22
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30376..31008
DNA (633bp) protein (211aa)
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216328}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=2.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216337};; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
orotate phosphoribosyltransferase (EC:2.4.2.10)
Orotate phosphoribosyltransferase n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y516_9BACT
L3_122_000M1_scaffold_4_23
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31148..32233
DNA (1086bp) protein (362aa)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
aspartate carbamoyltransferase (EC:2.1.3.2)
Aspartate carbamoyltransferase n=1 Tax=Alistipes sp. CAG:29 RepID=R6XRU6_9BACT
L3_122_000M1_scaffold_4_24
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32484..33059
DNA (576bp) protein (192aa)
hypothetical protein n=1 Tax=Alistipes onderdonkii RepID=UPI0003822DDD
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:EDN87234.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
RNA polymerase, sigma-24 subunit, ECF subfamily
L3_122_000M1_scaffold_4_25
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33154..34092
DNA (939bp) protein (313aa)
Sigma factor regulatory protein FecR/PupR family n=1 Tax=Alistipes sp. CAG:29 RepID=R6Z7F9_9BACT
Sigma factor regulatory protein FecR/PupR family {ECO:0000313|EMBL:CDD26437.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
Fe2+-dicitrate sensor membrane protein
L3_122_000M1_scaffold_4_26
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34256..37636
DNA (3381bp) protein (1127aa)
SusC/RagA family TonB-linked outer membrane protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6XXS4_9BACT
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:CDD26435.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
SusC/RagA family TonB-linked outer membrane protein
L3_122_000M1_scaffold_4_27
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

37651..39252
DNA (1602bp) protein (534aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y512_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD26434.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L3_122_000M1_scaffold_4_28
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

39278..40420
DNA (1143bp) protein (381aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6XRU2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD26433.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L3_122_000M1_scaffold_4_29
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

40429..41604
DNA (1176bp) protein (392aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6Z7F4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD26432.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
Domain of unknown function (DUF1735).
L3_122_000M1_scaffold_4_30
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

41632..43083
DNA (1452bp) protein (484aa)
hypothetical protein n=1 Tax=Alistipes onderdonkii RepID=UPI00037D5935
Uncharacterized protein {ECO:0000313|EMBL:CDD26431.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
Domain of unknown function (DUF1735).
Displaying items 1-30 of 238 in total

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