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L3_122_000M1_scaffold_30

Search features with annotation key words

Displaying items 1-30 of 124 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_122_000M1_scaffold_30_1
Sanguibacteroides justesenii, Sanguibacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2..394)
DNA (393bp) protein (131aa)
hypothetical protein, partial n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI00037A2DB1
Uncharacterized protein {ECO:0000313|EMBL:KIO42578.1}; TaxID=1547597 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Sanguibacteroides.;" source="Sanguibacteroides justesenii.;"
hypothetical protein
L3_122_000M1_scaffold_30_2
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(563..1588)
DNA (1026bp) protein (342aa)
Probable dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; 23S rRNA m2A2503 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; Ribosomal RNA large subunit methyltransferase N {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA (adenine(37)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA m2A37 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
23S rRNA m(2)A-2503 methyltransferase (EC:2.1.1.-)
cfr family radical SAM enzyme n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI00036124ED
L3_122_000M1_scaffold_30_3
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1856..2539
DNA (684bp) protein (228aa)
TonB family protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002F57625
TonB family protein
TonB-dependent receptor {ECO:0000313|EMBL:CCZ75425.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
L3_122_000M1_scaffold_30_4
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2655..3869
DNA (1215bp) protein (405aa)
GTPase HflX n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002F54838
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
GTP-binding protein HflX
L3_122_000M1_scaffold_30_5
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3895..4551
DNA (657bp) protein (219aa)
uracil phosphoribosyltransferase (EC:2.4.2.9)
uracil phosphoribosyltransferase n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002DC2664
Putative uracil phosphoribosyltransferase {ECO:0000313|EMBL:CDE64554.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
L3_122_000M1_scaffold_30_6
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4634..6520
DNA (1887bp) protein (629aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002E85C28
Arylsulfatase {ECO:0000313|EMBL:CDE64555.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
L3_122_000M1_scaffold_30_7
unknown

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6562..6675
DNA (114bp) protein (38aa)

This feature has no annotations

L3_122_000M1_scaffold_30_8
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6657..6917)
DNA (261bp) protein (87aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002F9BA25
Putative membrane protein insertion efficiency factor {ECO:0000256|HAMAP-Rule:MF_00386, ECO:0000256|SAAS:SAAS00100919}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
hypothetical protein
L3_122_000M1_scaffold_30_9
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6874..7251)
DNA (378bp) protein (126aa)
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rule:MF_00227};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143815};; Protein C5 {ECO:0000256|HAMAP-Rule:MF_00227}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0003753C09
RNase P protein component
L3_122_000M1_scaffold_30_10
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7292..8158)
DNA (867bp) protein (289aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002FA4A0C
Uncharacterized protein {ECO:0000313|EMBL:EFR58524.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
uroporphyrinogen-III synthase
L3_122_000M1_scaffold_30_11
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8161..9228)
DNA (1068bp) protein (356aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI000303C5AB
Uncharacterized protein {ECO:0000313|EMBL:EFR58484.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
hypothetical protein
L3_122_000M1_scaffold_30_12
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9225..10424)
DNA (1200bp) protein (400aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
histidine kinase n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002ED6B39
histidine kinase
L3_122_000M1_scaffold_30_13
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10437..12098)
DNA (1662bp) protein (554aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002FDC3A8
Peptidase S41 family {ECO:0000313|EMBL:CDD24064.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
C-terminal processing peptidase
L3_122_000M1_scaffold_30_14
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12105..12581)
DNA (477bp) protein (159aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI00036E406C
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDD24063.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
L3_122_000M1_scaffold_30_15
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12652..13530)
DNA (879bp) protein (293aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570};; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
(E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) (EC:1.17.1.2)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0003030CEB
L3_122_000M1_scaffold_30_16
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13559..14275)
DNA (717bp) protein (239aa)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00238};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00238};; Cytidine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
cytidylate kinase n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI000319A78E
cytidylate kinase
L3_122_000M1_scaffold_30_17
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14265..14945)
DNA (681bp) protein (227aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI00031A83DD
threonine efflux protein
Putative threonine efflux protein {ECO:0000313|EMBL:CCZ75441.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
L3_122_000M1_scaffold_30_18
unknown

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comp(14927..15652)
DNA (726bp) protein (242aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002DE739F
L3_122_000M1_scaffold_30_19
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16368..17021
DNA (654bp) protein (218aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0003829351
HEPN domain protein {ECO:0000313|EMBL:CDD25980.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L3_122_000M1_scaffold_30_20
unknown

Not on your lists

17512..17892
DNA (381bp) protein (127aa)

This feature has no annotations

L3_122_000M1_scaffold_30_21
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18025..19452
DNA (1428bp) protein (476aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002D770B6
Carbon starvation protein, predicted membrane protein
Carbon starvation protein, predicted membrane protein {ECO:0000313|EMBL:CBK64894.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L3_122_000M1_scaffold_30_22
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19433..20122
DNA (690bp) protein (230aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002F263E2
Uncharacterized protein {ECO:0000313|EMBL:EDS02754.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
hypothetical protein
L3_122_000M1_scaffold_30_23
Alistipes sp. CAG:268, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20190..20762)
DNA (573bp) protein (191aa)
Thymidine kinase {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544}; EC=2.7.1.21 {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544};; TaxID=1262693 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:268.;"
Thymidine kinase (EC:2.7.1.21)
thymidine kinase n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI00030866C8
L3_122_000M1_scaffold_30_24
Alistipes sp. CAG:268, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21048..22364)
DNA (1317bp) protein (439aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylpyruvate transferase {ECO:0000256|HAMAP-Rule:MF_00111}; UDP-N-acetylglucosamine enolpyruvyl transferase {ECO:0000256|HAMAP-Rule:MF_00111}; TaxID=1262693 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:268.;"
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI00031BB437
UDP-N-acetylglucosamine 1-carboxyvinyltransferase
L3_122_000M1_scaffold_30_25
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22648..23802
DNA (1155bp) protein (385aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI00036BB208
Uncharacterized protein {ECO:0000313|EMBL:CDE62826.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
hypothetical protein
L3_122_000M1_scaffold_30_26
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23956..25365
DNA (1410bp) protein (470aa)
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:EDS04650.1}; EC=2.1.1.- {ECO:0000313|EMBL:EDS04650.1};; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
23S rRNA m(5)U-1939 methyltransferase (EC:2.1.1.-)
RNA methyltransferase n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI00036F7A52
L3_122_000M1_scaffold_30_27
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25849..26550
DNA (702bp) protein (234aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI00036DD7A4
Uncharacterized protein {ECO:0000313|EMBL:CCZ76204.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
hypothetical protein
L3_122_000M1_scaffold_30_28
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26713..27414
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Alistipes finegoldii CAG:68 RepID=R5UKG7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCZ76204.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
hypothetical protein
L3_122_000M1_scaffold_30_29
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27529..27984
DNA (456bp) protein (152aa)
cytidine deaminase (EC:3.5.4.5)
Cytidine deaminase {ECO:0000313|EMBL:AFL77959.1}; EC=3.5.4.5 {ECO:0000313|EMBL:AFL77959.1};; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
cytidine deaminase n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI00031247B9
L3_122_000M1_scaffold_30_30
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27986..28693
DNA (708bp) protein (236aa)
ribosomal large subunit pseudouridine synthase D (EC:5.4.99.- 5.4.99.12)
Ribosomal large subunit pseudouridine synthase D {ECO:0000313|EMBL:CBK64089.1}; EC=5.4.99.- {ECO:0000313|EMBL:CBK64089.1};; EC=5.4.99.12 {ECO:0000313|EMBL:CBK64089.1};; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
ribosomal large subunit pseudouridine synthase D n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI00030CF0A9
Displaying items 1-30 of 124 in total

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