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L3_122_000M1_scaffold_134

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Displaying items 1-30 of 68 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_122_000M1_scaffold_134_1
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..5922)
DNA (5922bp) protein (1974aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 1_1_57FAA RepID=F7JH88_9FIRM
GDSL-like protein {ECO:0000313|EMBL:EDK24482.1}; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
hypothetical protein
L3_122_000M1_scaffold_134_2
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6108..6623
DNA (516bp) protein (172aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=A5KLW0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25419.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
hypothetical protein
L3_122_000M1_scaffold_134_3
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6702..7205)
DNA (504bp) protein (168aa)
Hydrolase, NUDIX family n=5 Tax=Clostridiales RepID=A5KLW1_9FIRM
Mutator MutT protein {ECO:0000313|EMBL:EFV19144.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
Isopentenyldiphosphate isomerase
L3_122_000M1_scaffold_134_4
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7282..9126)
DNA (1845bp) protein (615aa)
ABC transporter, ATP-binding protein n=4 Tax=Clostridiales RepID=A5KLW2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25417.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
ABC-type multidrug transport system, ATPase and permease components
L3_122_000M1_scaffold_134_5
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9119..10852)
DNA (1734bp) protein (578aa)
ABC transporter, ATP-binding protein n=1 Tax=Ruminococcus torques ATCC 27756 RepID=A5KLW3_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDK24488.1}; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
ABC-type multidrug transport system, ATPase and permease components
L3_122_000M1_scaffold_134_6
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10854..11477)
DNA (624bp) protein (208aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
Endonuclease III n=5 Tax=Clostridiales RepID=A5KLW4_9FIRM
hypothetical protein
L3_122_000M1_scaffold_134_7
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11496..11663)
DNA (168bp) protein (56aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=R5QGJ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV19140.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
L3_122_000M1_scaffold_134_8
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11886..13640)
DNA (1755bp) protein (585aa)
Peptidase, S8/S53 family {ECO:0000313|EMBL:EDK24492.1}; EC=3.4.21.- {ECO:0000313|EMBL:EDK24492.1};; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
Peptidase, S8/S53 family n=1 Tax=Ruminococcus torques ATCC 27756 RepID=A5KLW7_9FIRM
peptidase S8/S53 subtilisin kexin sedolisin
L3_122_000M1_scaffold_134_9
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13844..15067)
DNA (1224bp) protein (408aa)
Pyrophosphate--fructose 6-phosphate 1-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_01978}; EC=2.7.1.90 {ECO:0000256|HAMAP-Rule:MF_01978};; 6-phosphofructokinase, pyrophosphate dependent {ECO:0000256|HAMAP-Rule:MF_01978}; PPi-dependent phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_01978}; Pyrophosphate-dependent 6-phosphofructose-1-kinase {ECO:0000256|HAMAP-Rule:MF_01978}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
6-phosphofructokinase (EC:2.7.1.11)
Phosphofructokinase n=5 Tax=Clostridiales RepID=A5KLW8_9FIRM
L3_122_000M1_scaffold_134_10
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15278..16294
DNA (1017bp) protein (339aa)
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EDK24494.1}; EC=2.4.-.- {ECO:0000313|EMBL:EDK24494.1};; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
Glycosyltransferase, group 2 family protein n=5 Tax=Clostridiales RepID=A5KLW9_9FIRM
Glycosyltransferases involved in cell wall biogenesis
L3_122_000M1_scaffold_134_11
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17017..17487
DNA (471bp) protein (157aa)
RNA polymerase sigma factor SigX n=4 Tax=Clostridiales RepID=E5XHT5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25410.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
putative RNA polymerase sigma factor
L3_122_000M1_scaffold_134_12
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17480..17935
DNA (456bp) protein (152aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A5KLX1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV19135.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
hypothetical protein
L3_122_000M1_scaffold_134_13
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18058..18891)
DNA (834bp) protein (278aa)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
diaminopimelate epimerase (EC:5.1.1.7)
Diaminopimelate epimerase n=4 Tax=Clostridiales RepID=E5XHT3_9FIRM
L3_122_000M1_scaffold_134_14
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18991..19938)
DNA (948bp) protein (316aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=A5KLX4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG87048.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
Putative GTPases (G3E family)
L3_122_000M1_scaffold_134_15
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20021..21175)
DNA (1155bp) protein (385aa)
CobW/P47K family protein n=1 Tax=Ruminococcus torques ATCC 27756 RepID=A5KLX5_9FIRM
CobW/P47K family protein {ECO:0000313|EMBL:EDK24500.1}; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
Putative GTPases (G3E family)
L3_122_000M1_scaffold_134_16
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21200..21952)
DNA (753bp) protein (251aa)
exodeoxyribonuclease III (EC:3.1.11.2)
Exodeoxyribonuclease III n=5 Tax=Clostridiales RepID=A5KLX6_9FIRM
Exodeoxyribonuclease III Xth {ECO:0000313|EMBL:EFV19131.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
L3_122_000M1_scaffold_134_17
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22055..22837)
DNA (783bp) protein (261aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
pseudouridylate synthase I (EC:5.4.99.12)
tRNA pseudouridine synthase A n=1 Tax=Ruminococcus torques ATCC 27756 RepID=A5KLX7_9FIRM
L3_122_000M1_scaffold_134_18
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22846..23295)
DNA (450bp) protein (150aa)
Transcriptional repressor NrdR n=5 Tax=Clostridiales RepID=A5KLX8_9FIRM
Transcriptional repressor NrdR {ECO:0000256|HAMAP-Rule:MF_00440, ECO:0000256|SAAS:SAAS00087559}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
transcriptional regulator NrdR
L3_122_000M1_scaffold_134_19
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23354..23608)
DNA (255bp) protein (85aa)
Sporulation protein, YlmC/YmxH family n=5 Tax=Clostridiales RepID=A5KLX9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG87053.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
sporulation protein, YlmC/YmxH family
L3_122_000M1_scaffold_134_20
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23777..24151
DNA (375bp) protein (125aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=A5KLY1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25401.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
hypothetical protein
L3_122_000M1_scaffold_134_21
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24219..25793
DNA (1575bp) protein (525aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=A5KLY2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG87055.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
Predicted integral membrane protein
L3_122_000M1_scaffold_134_22
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25940..26749
DNA (810bp) protein (270aa)
Hemolysin III n=5 Tax=Clostridiales RepID=E5XHS4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG87056.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
channel protein, hemolysin III family
L3_122_000M1_scaffold_134_23
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26831..27574)
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Ruminococcus torques CAG:61 RepID=R5Q9Y1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25398.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
Transcriptional regulators of sugar metabolism
L3_122_000M1_scaffold_134_24
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27797..29713)
DNA (1917bp) protein (639aa)
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 n=6 Tax=root RepID=A5KLY6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25397.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
PTS system D-fructose-specific IIA component (F1P-forming), Frc family (TC 4.A.2.1.4)/PTS system D-fructose-specific IIB component (F1P-forming), Frc family (TC 4.A.2.1.4)/PTS system D-fructose-specific IIC component (F1P-forming), Frc family (TC 4.A.2.1.4)
L3_122_000M1_scaffold_134_25
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29925..30833)
DNA (909bp) protein (303aa)
Tagatose-6-phosphate kinase {ECO:0000256|PIRNR:PIRNR000535}; EC=2.7.1.144 {ECO:0000256|PIRNR:PIRNR000535};; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
fructose-1-phosphate kinase (EC:2.7.1.56)
Tagatose-6-phosphate kinase n=5 Tax=Clostridiales RepID=A5KLY7_9FIRM
L3_122_000M1_scaffold_134_26
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31094..31669)
DNA (576bp) protein (192aa)
HD domain protein n=5 Tax=Clostridiales RepID=A5KLY8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25395.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
metal dependent phosphohydrolase
L3_122_000M1_scaffold_134_27
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31858..32589
DNA (732bp) protein (244aa)
Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) (EC:1.1.1.100)
Oxidoreductase, short chain dehydrogenase/reductase family protein n=5 Tax=Clostridiales RepID=A5KLY9_9FIRM
3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:EFV19120.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
L3_122_000M1_scaffold_134_28
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32719..33588
DNA (870bp) protein (290aa)
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
Uncharacterized protein n=3 Tax=Clostridiales RepID=R5Q9X6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25393.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
L3_122_000M1_scaffold_134_29
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33696..33977)
DNA (282bp) protein (94aa)
Putative septation protein SpoVG n=5 Tax=Clostridiales RepID=A5KLZ2_9FIRM
Putative septation protein SpoVG {ECO:0000256|HAMAP-Rule:MF_00819}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
Uncharacterized protein, involved in the regulation of septum location
L3_122_000M1_scaffold_134_30
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34029..35126)
DNA (1098bp) protein (366aa)
Glucose-1-phosphate adenylyltransferase {ECO:0000256|SAAS:SAAS00083544}; EC=2.7.7.27 {ECO:0000256|SAAS:SAAS00083544};; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
ADP-glucose pyrophosphorylase (EC:2.7.7.27)
Glucose-1-phosphate adenylyltransferase n=4 Tax=Clostridiales RepID=E5XIQ4_9FIRM
Displaying items 1-30 of 68 in total

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