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L3_122_000M1_scaffold_243

Search features with annotation key words

Displaying items 1-30 of 67 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_122_000M1_scaffold_243_1
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..228)
DNA (228bp) protein (76aa)
Glutamate--ammonia ligase, catalytic domain protein {ECO:0000313|EMBL:EEU95933.1}; EC=6.3.1.2 {ECO:0000313|EMBL:EEU95933.1};; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Uncharacterized protein related to glutamine synthetase (EC:6.3.1.2)
Glutamate--ammonia ligase, catalytic domain protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H852_9FIRM
L3_122_000M1_scaffold_243_2
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(479..1708)
DNA (1230bp) protein (410aa)
SAM-dependent methyltransferase (EC:2.1.1.-)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H850_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU95931.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
L3_122_000M1_scaffold_243_3
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1970..2473
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H848_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU95929.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
hypothetical protein
L3_122_000M1_scaffold_243_4
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2563..4053)
DNA (1491bp) protein (497aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H847_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU95928.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
hypothetical protein
L3_122_000M1_scaffold_243_5
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4258..5235)
DNA (978bp) protein (326aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H846_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU95927.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
hypothetical protein
L3_122_000M1_scaffold_243_6
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5239..5712)
DNA (474bp) protein (158aa)
Sigma-70, region 4 n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H845_9FIRM
Sigma-70, region 4 {ECO:0000313|EMBL:EEU95926.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
RNA polymerase sigma factor, sigma-70 family
L3_122_000M1_scaffold_243_7
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5888..6604)
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H844_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU95925.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Predicted membrane protein
L3_122_000M1_scaffold_243_8
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6788..7615
DNA (828bp) protein (276aa)
RNA methyltransferase, TrmH family n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H843_9FIRM
RNA methyltransferase, TrmH family {ECO:0000313|EMBL:EEU95924.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
rRNA methylases
L3_122_000M1_scaffold_243_9
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7701..8927)
DNA (1227bp) protein (409aa)
Pyrophosphate--fructose 6-phosphate 1-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_01978}; EC=2.7.1.90 {ECO:0000256|HAMAP-Rule:MF_01978};; 6-phosphofructokinase, pyrophosphate dependent {ECO:0000256|HAMAP-Rule:MF_01978}; PPi-dependent phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_01978}; Pyrophosphate-dependent 6-phosphofructose-1-kinase {ECO:0000256|HAMAP-Rule:MF_01978}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
6-phosphofructokinase (EC:2.7.1.11)
Phosphofructokinase n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H842_9FIRM
L3_122_000M1_scaffold_243_10
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9025..10248)
DNA (1224bp) protein (408aa)
Pyrophosphate--fructose 6-phosphate 1-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_01978}; EC=2.7.1.90 {ECO:0000256|HAMAP-Rule:MF_01978};; 6-phosphofructokinase, pyrophosphate dependent {ECO:0000256|HAMAP-Rule:MF_01978}; PPi-dependent phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_01978}; Pyrophosphate-dependent 6-phosphofructose-1-kinase {ECO:0000256|HAMAP-Rule:MF_01978}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
6-phosphofructokinase (EC:2.7.1.11)
Phosphofructokinase n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H841_9FIRM
L3_122_000M1_scaffold_243_11
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10623..11651
DNA (1029bp) protein (343aa)
GDSL-like protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H839_9FIRM
GDSL-like protein {ECO:0000313|EMBL:EEU95920.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
GDSL-like Lipase/Acylhydrolase.
L3_122_000M1_scaffold_243_12
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11731..13554)
DNA (1824bp) protein (608aa)
GTP-binding protein TypA n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H838_9FIRM
GTP-binding protein TypA {ECO:0000313|EMBL:EEU95919.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
GTP-binding protein TypA/BipA
L3_122_000M1_scaffold_243_13
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13762..15369
DNA (1608bp) protein (536aa)
Metallo-beta-lactamase domain protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H836_9FIRM
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:EEU95917.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Predicted exonuclease of the beta-lactamase fold involved in RNA processing
L3_122_000M1_scaffold_243_14
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15510..15875)
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H835_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU95916.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
L3_122_000M1_scaffold_243_15
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16021..16662)
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H834_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU95915.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
hypothetical protein
L3_122_000M1_scaffold_243_16
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16649..17269)
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H833_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU95914.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
hypothetical protein
L3_122_000M1_scaffold_243_17
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17259..17603)
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H832_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU95913.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
hypothetical protein
L3_122_000M1_scaffold_243_18
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17593..18165)
DNA (573bp) protein (191aa)
Sigma-70 region 2 n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H831_9FIRM
Sigma-70 region 2 {ECO:0000313|EMBL:EEU95912.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
RNA polymerase sigma factor, sigma-70 family
L3_122_000M1_scaffold_243_19
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18326..19696
DNA (1371bp) protein (457aa)
Transporter n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H830_9FIRM
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Na+-dependent transporters of the SNF family
L3_122_000M1_scaffold_243_20
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19872..20597
DNA (726bp) protein (242aa)
LytTr DNA-binding domain protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H829_9FIRM
LytTr DNA-binding domain protein {ECO:0000313|EMBL:EEU95910.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Response regulator of the LytR/AlgR family
L3_122_000M1_scaffold_243_21
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20590..21879
DNA (1290bp) protein (430aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H827_9FIRM
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:EEU95953.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
L3_122_000M1_scaffold_243_22
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22114..22302
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H825_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU95951.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Cupin domain.
L3_122_000M1_scaffold_243_23
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22360..22797)
DNA (438bp) protein (146aa)
Aspartate carbamoyltransferase regulatory chain, allosteric domain protein {ECO:0000313|EMBL:EEU95950.1}; EC=2.1.3.2 {ECO:0000313|EMBL:EEU95950.1};; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Aspartate carbamoyltransferase regulatory chain, allosteric domain protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H824_9FIRM
Aspartate carbamoyltransferase, regulatory subunit
L3_122_000M1_scaffold_243_24
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22799..23740)
DNA (942bp) protein (314aa)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
aspartate carbamoyltransferase (EC:2.1.3.2)
Aspartate carbamoyltransferase n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZHX9_9FIRM
L3_122_000M1_scaffold_243_25
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23755..24510)
DNA (756bp) protein (252aa)
Transcriptional regulator, GntR family n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H821_9FIRM
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EEU95947.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
transcriptional regulator, GntR family
L3_122_000M1_scaffold_243_26
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24698..25240
DNA (543bp) protein (181aa)
Acetyltransferase, GNAT family n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H820_9FIRM
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EEU95946.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Acetyltransferases
L3_122_000M1_scaffold_243_27
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25282..26655)
DNA (1374bp) protein (458aa)
MATE efflux family protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H819_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EEU95945.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
putative efflux protein, MATE family
L3_122_000M1_scaffold_243_28
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26837..28852)
DNA (2016bp) protein (672aa)
Glycosyl hydrolase, family 31 {ECO:0000313|EMBL:EEU95942.1}; EC=3.2.1.- {ECO:0000313|EMBL:EEU95942.1};; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
alpha-glucosidase (EC:3.2.1.20)
Glycosyl hydrolase, family 31 n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H817_9FIRM
L3_122_000M1_scaffold_243_29
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28891..29061
DNA (171bp) protein (57aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H815_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU95941.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
L3_122_000M1_scaffold_243_30
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29093..29713
DNA (621bp) protein (207aa)
Bacterial sugar transferase n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6PWY0_9FIRM
Bacterial sugar transferase {ECO:0000313|EMBL:CDC28040.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
Sugar transferases involved in lipopolysaccharide synthesis
Displaying items 1-30 of 67 in total

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