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L3_122_000M1_scaffold_244

Search features with annotation key words

Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_122_000M1_scaffold_244_1
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1..849)
DNA (849bp) protein (283aa)
Uncharacterized protein n=1 Tax=Bacteroides uniformis dnLKV2 RepID=R9I2G0_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EOS10448.1}; TaxID=1235787 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis dnLKV2.;"
hypothetical protein
L3_122_000M1_scaffold_244_2
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1155..1541)
DNA (387bp) protein (129aa)
Uncharacterized protein n=3 Tax=root RepID=R5BB58_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KEJ83514.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
hypothetical protein
L3_122_000M1_scaffold_244_3
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1562..2794)
DNA (1233bp) protein (411aa)
Site-specific recombinase, phage integrase family n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZFF1_9BACE
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EDM20911.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
integrase
L3_122_000M1_scaffold_244_4
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3281..4255
DNA (975bp) protein (325aa)
Geranylgeranyl pyrophosphate synthase (EC:2.5.1.10)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002D955B6
Uncharacterized protein {ECO:0000313|EMBL:EHB91467.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
L3_122_000M1_scaffold_244_5
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4263..5531
DNA (1269bp) protein (423aa)
Collagenase precursor (EC:3.4.-.-)
collagenase n=1 Tax=Alistipes sp. AP11 RepID=UPI0002F9504C
Uncharacterized protein {ECO:0000313|EMBL:EHB91468.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
L3_122_000M1_scaffold_244_6
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5550..6629
DNA (1080bp) protein (360aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002F2AB9E
Uncharacterized protein {ECO:0000313|EMBL:EHB91469.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
hypothetical protein
L3_122_000M1_scaffold_244_7
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6945..7655)
DNA (711bp) protein (237aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; EC=2.7.7.60 {ECO:0000256|HAMAP-Rule:MF_00108};; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase {ECO:0000256|HAMAP-Rule:MF_00108}; MEP cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002F89AE7
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
L3_122_000M1_scaffold_244_8
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7636..8622)
DNA (987bp) protein (329aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002EFD7BE
Uncharacterized protein {ECO:0000313|EMBL:EHB91472.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
NAD-dependent epimerase/dehydratase
L3_122_000M1_scaffold_244_9
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8654..9109)
DNA (456bp) protein (152aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002D94513
Uncharacterized protein {ECO:0000313|EMBL:EHB91471.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
hypothetical protein
L3_122_000M1_scaffold_244_10
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9106..10434)
DNA (1329bp) protein (443aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI000365C555
Uncharacterized protein {ECO:0000313|EMBL:EHB91470.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
metalloendopeptidase-like membrane protein
L3_122_000M1_scaffold_244_11
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10660..11493)
DNA (834bp) protein (278aa)
2-dehydro-3-deoxyphosphooctonate aldolase {ECO:0000256|SAAS:SAAS00078566}; EC=2.5.1.55 {ECO:0000256|SAAS:SAAS00078538};; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
2-dehydro-3-deoxyphosphogluconate aldolase n=1 Tax=Alistipes sp. AP11 RepID=UPI000302D151
2-dehydro-3-deoxyphosphogluconate aldolase
L3_122_000M1_scaffold_244_12
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11918..13192)
DNA (1275bp) protein (425aa)
ATPase AAA n=1 Tax=Alistipes sp. AP11 RepID=UPI0002F472F6
Uncharacterized protein {ECO:0000313|EMBL:EHB93132.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
Recombination protein MgsA
L3_122_000M1_scaffold_244_13
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13257..13760
DNA (504bp) protein (168aa)
phosphoesterase n=1 Tax=Alistipes sp. AP11 RepID=UPI000369E49D
Uncharacterized protein {ECO:0000313|EMBL:EHB93133.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
phosphoesterase
L3_122_000M1_scaffold_244_14
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13816..16368
DNA (2553bp) protein (851aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0003817A0A
Uncharacterized protein {ECO:0000313|EMBL:EHB93134.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
chaperone ATPase
L3_122_000M1_scaffold_244_15
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16746..18116
DNA (1371bp) protein (457aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0003818736
Uncharacterized protein {ECO:0000313|EMBL:EHB93140.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
putative efflux protein, MATE family
L3_122_000M1_scaffold_244_16
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18505..19500)
DNA (996bp) protein (332aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002F74850
Uncharacterized protein {ECO:0000313|EMBL:EDS02432.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
esterase/lipase
L3_122_000M1_scaffold_244_17
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20159..21121)
DNA (963bp) protein (321aa)
Ribonuclease Z {ECO:0000256|HAMAP-Rule:MF_01818}; Short=RNase Z {ECO:0000256|HAMAP-Rule:MF_01818};; EC=3.1.26.11 {ECO:0000256|HAMAP-Rule:MF_01818};; tRNA 3 endonuclease {ECO:0000256|HAMAP-Rule:MF_01818}; tRNase Z {ECO:0000256|HAMAP-Rule:MF_01818}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI00036BBFF5
beta-lactamase superfamily metal-dependent hydrolase
L3_122_000M1_scaffold_244_18
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(21135..23042)
DNA (1908bp) protein (636aa)
30S ribosomal protein S1 n=1 Tax=Alistipes sp. AP11 RepID=UPI00035DB14F
Uncharacterized protein {ECO:0000313|EMBL:EHB93146.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
30S ribosomal protein S1
L3_122_000M1_scaffold_244_19
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23300..24982
DNA (1683bp) protein (561aa)
Uridine kinase (EC:2.7.1.48)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002F63D56
Uncharacterized protein {ECO:0000313|EMBL:EHB93148.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
L3_122_000M1_scaffold_244_20
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25094..27952
DNA (2859bp) protein (953aa)
Glycine dehydrogenase (aminomethyl-transferring) {ECO:0000256|SAAS:SAAS00022796}; EC=1.4.4.2 {ECO:0000256|SAAS:SAAS00022796};; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
glycine dehydrogenase n=1 Tax=Alistipes sp. AP11 RepID=UPI0003120BE6
glycine dehydrogenase, decarboxylating
L3_122_000M1_scaffold_244_21
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28410..28979
DNA (570bp) protein (190aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915, ECO:0000256|RuleBase:RU004231}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI000373F767
FKBP-type peptidyl-prolyl cis-trans isomerase
L3_122_000M1_scaffold_244_22
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29359..30951)
DNA (1593bp) protein (531aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002FD7BAB
Glycosyl hydrolase family 20, catalytic domain protein {ECO:0000313|EMBL:EXZ46582.1}; TaxID=1339280 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 2-F-2 #4.;"
glycoside hydrolase family 20
L3_122_000M1_scaffold_244_23
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31242..31661)
DNA (420bp) protein (140aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002F24B1B
acetyl/propionyl-CoA carboxylase subunit alpha
Acetyl/propionyl-CoA carboxylase alpha subunit {ECO:0000313|EMBL:CCZ77163.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
L3_122_000M1_scaffold_244_24
unknown

Not on your lists

comp(31711..31929)
DNA (219bp) protein (73aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI00030DC85F
L3_122_000M1_scaffold_244_25
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31932..33494)
DNA (1563bp) protein (521aa)
Methylmalonyl-CoA decarboxylase, alpha chain (EC:4.1.1.41)
methylmalonyl-CoA carboxyltransferase n=1 Tax=Alistipes sp. AP11 RepID=UPI0002F0F70E
Uncharacterized protein {ECO:0000313|EMBL:EHB93155.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
L3_122_000M1_scaffold_244_26
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33568..33981)
DNA (414bp) protein (138aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002F45913
Methylmalonyl-CoA epimerase {ECO:0000313|EMBL:EHB93156.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
hypothetical protein
L3_122_000M1_scaffold_244_27
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34253..34723
DNA (471bp) protein (157aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI00036990C8
Uncharacterized protein {ECO:0000313|EMBL:EHB93158.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
hypothetical protein
L3_122_000M1_scaffold_244_28
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34814..36172
DNA (1359bp) protein (453aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002E9BF48
hypothetical protein
Tax=GWC2_Bacteroidetes_46_850_curated
L3_122_000M1_scaffold_244_29
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36608..37870)
DNA (1263bp) protein (421aa)
ATP-dependent Clp protease ATP-binding subunit ClpX (EC:3.4.21.92)
ATPase AAA n=1 Tax=Alistipes sp. AP11 RepID=UPI0002E11550
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
L3_122_000M1_scaffold_244_30
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(37943..38620)
DNA (678bp) protein (226aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
ATP-dependent Clp protease ClpP n=1 Tax=Alistipes sp. AP11 RepID=UPI0002D5AEE0
protease subunit of ATP-dependent protease
Displaying items 1-30 of 57 in total

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