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L3_122_000M1_scaffold_248

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_122_000M1_scaffold_248_1
Bacteroides coprocola, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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291..416
DNA (126bp) protein (42aa)
Uncharacterized protein n=1 Tax=Bacteroides coprocola DSM 17136 RepID=B3JHZ1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDV01415.1}; TaxID=470145 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprocola DSM 17136.;"
L3_122_000M1_scaffold_248_2
Bacteroides coprocola CAG:162, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(441..2009)
DNA (1569bp) protein (523aa)
Peptide chain release factor 3 n=2 Tax=Bacteroides RepID=B3JHZ2_9BACE
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprocola CAG:162.;"
peptide chain release factor 3
L3_122_000M1_scaffold_248_3
Bacteroides coprocola, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2036..2896)
DNA (861bp) protein (287aa)
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:EDV01417.1}; EC=1.1.1.133 {ECO:0000313|EMBL:EDV01417.1};; TaxID=470145 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprocola DSM 17136.;"
dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133)
dTDP-4-dehydrorhamnose reductase n=1 Tax=Bacteroides coprocola DSM 17136 RepID=B3JHZ3_9BACE
L3_122_000M1_scaffold_248_4
Bacteroides coprocola CAG:162, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2910..3458)
DNA (549bp) protein (183aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=B3JHZ4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDA69980.1}; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprocola CAG:162.;"
hypothetical protein
L3_122_000M1_scaffold_248_5
Bacteroides coprocola CAG:162, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3460..4119)
DNA (660bp) protein (220aa)
Translocator protein LysE family n=1 Tax=Bacteroides coprocola CAG:162 RepID=R6CAN4_9BACE
Translocator protein LysE family {ECO:0000313|EMBL:CDA69979.1}; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprocola CAG:162.;"
lysine exporter protein LysE/YggA
L3_122_000M1_scaffold_248_6
Bacteroides coprocola, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4258..7962
DNA (3705bp) protein (1235aa)
Phosphoribosylformylglycinamidine synthase {ECO:0000256|HAMAP-Rule:MF_00419}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_00419};; Short=FGAMS {ECO:0000256|HAMAP-Rule:MF_00419};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_00419};; Formylglycinamide ribonucleotide amidotransferase {ECO:0000256|HAMAP-Rule:MF_00419}; TaxID=470145 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprocola DSM 17136.;"
Phosphoribosylformylglycinamidine synthase (EC:6.3.5.3)
Putative phosphoribosylformylglycinamidine synthase n=1 Tax=Bacteroides coprocola DSM 17136 RepID=B3JHZ6_9BACE
L3_122_000M1_scaffold_248_7
Bacteroides coprocola CAG:162, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8103..12086
DNA (3984bp) protein (1328aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Bacteroides coprocola CAG:162 RepID=R6CXC1_9BACE
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:CDA69977.1}; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprocola CAG:162.;"
integral membrane sensor hybrid histidine kinase
L3_122_000M1_scaffold_248_8
Bacteroides coprocola CAG:162, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12104..12655
DNA (552bp) protein (184aa)
Chromate transport protein n=2 Tax=Bacteroides RepID=B3JHZ8_9BACE
Chromate transport protein {ECO:0000313|EMBL:CDA69976.1}; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprocola CAG:162.;"
chromate transporter
L3_122_000M1_scaffold_248_9
Bacteroides coprocola CAG:162, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12667..13251
DNA (585bp) protein (195aa)
Chromate transport protein n=2 Tax=Bacteroides RepID=B3JHZ9_9BACE
Chromate transport protein {ECO:0000313|EMBL:CDA69975.1}; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprocola CAG:162.;"
chromate transporter
L3_122_000M1_scaffold_248_10
unknown

Not on your lists

comp(13238..13345)
DNA (108bp) protein (36aa)

This feature has no annotations

L3_122_000M1_scaffold_248_11
Bacteroides coprocola, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13397..14428)
DNA (1032bp) protein (344aa)
ABC transporter, ATP-binding protein n=1 Tax=Bacteroides coprocola DSM 17136 RepID=B3JI00_9BACE
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDV01424.1}; TaxID=470145 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprocola DSM 17136.;"
iron ABC transporter ATP-binding protein
L3_122_000M1_scaffold_248_12
Bacteroides coprocola, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14431..15465)
DNA (1035bp) protein (345aa)
Iron chelate uptake ABC transporter, FeCT family, permease protein n=1 Tax=Bacteroides coprocola DSM 17136 RepID=B3JI01_9BACE
Iron chelate uptake ABC transporter, FeCT family, permease protein {ECO:0000313|EMBL:EDV01425.1}; TaxID=470145 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprocola DSM 17136.;"
iron(III) ABC transporter permease
L3_122_000M1_scaffold_248_13
Bacteroides coprocola CAG:162, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15485..16633)
DNA (1149bp) protein (383aa)
Periplasmic binding protein n=2 Tax=Bacteroides RepID=B3JI02_9BACE
Periplasmic binding protein {ECO:0000313|EMBL:CDA69972.1}; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprocola CAG:162.;"
iron-related ABC transport periplasmic binding protein
L3_122_000M1_scaffold_248_14
Bacteroides coprocola CAG:162, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17067..18509
DNA (1443bp) protein (481aa)
Putative potassium/proton antiporter n=1 Tax=Bacteroides coprocola CAG:162 RepID=R6CEQ5_9BACE
Putative potassium/proton antiporter {ECO:0000313|EMBL:CDA69971.1}; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprocola CAG:162.;"
sodium/hydrogen exchanger
L3_122_000M1_scaffold_248_15
Bacteroides coprocola CAG:162, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18581..20785
DNA (2205bp) protein (735aa)
Putative K(+)-stimulated pyrophosphate-energized sodium pump {ECO:0000256|HAMAP-Rule:MF_01129}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_01129};; Membrane-bound sodium-translocating pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01129}; Pyrophosphate-energized inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01129}; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprocola CAG:162.;"
pyrophosphate-energized proton pump (EC:3.6.1.1)
Putative K(+)-stimulated pyrophosphate-energized sodium pump n=1 Tax=Bacteroides coprocola CAG:162 RepID=R6C3C5_9BACE
L3_122_000M1_scaffold_248_16
Bacteroides coprocola CAG:162, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21043..22383
DNA (1341bp) protein (447aa)
Outer membrane protein transport protein Ompp1/FadL/TodX family n=1 Tax=Bacteroides coprocola CAG:162 RepID=R6C0N2_9BACE
Outer membrane protein transport protein Ompp1/FadL/TodX family {ECO:0000313|EMBL:CDA69968.1}; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprocola CAG:162.;"
Long-chain fatty acid transport protein
L3_122_000M1_scaffold_248_17
Bacteroides coprocola CAG:162, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22621..24510
DNA (1890bp) protein (630aa)
Putative carbohydrate-active enzyme n=1 Tax=Bacteroides coprocola CAG:162 RepID=R6CXB1_9BACE
Putative carbohydrate-active enzyme {ECO:0000313|EMBL:CDA69967.1}; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprocola CAG:162.;"
L3_122_000M1_scaffold_248_18
Bacteroides coprocola CAG:162, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24852..29225
DNA (4374bp) protein (1458aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprocola CAG:162.;"
Uncharacterized protein n=1 Tax=Bacteroides coprocola CAG:162 RepID=R6CEP9_9BACE
GGDEF domain
L3_122_000M1_scaffold_248_19
Bacteroides sp. CAG:1076, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29222..29869
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:1076 RepID=R5N195_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCY91331.1}; TaxID=1262735 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:1076.;"
response regulator
L3_122_000M1_scaffold_248_20
Bacteroides coprocola CAG:162, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30079..31335
DNA (1257bp) protein (419aa)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprocola CAG:162.;"
pgk; phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase n=2 Tax=Bacteroides RepID=B3JI07_9BACE
L3_122_000M1_scaffold_248_21
Bacteroides coprocola CAG:162, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31783..33018)
DNA (1236bp) protein (412aa)
Sodium ion-translocating decarboxylase, beta subunit n=2 Tax=Bacteroides RepID=B3JI08_9BACE
Sodium ion-translocating decarboxylase beta subunit {ECO:0000313|EMBL:CDA71119.1}; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprocola CAG:162.;"
oxaloacetate decarboxylase subunit beta
L3_122_000M1_scaffold_248_22
Bacteroides coprocola CAG:162, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33018..34877)
DNA (1860bp) protein (620aa)
Biotin-requiring enzyme n=1 Tax=Bacteroides coprocola CAG:162 RepID=R6C6G9_9BACE
Biotin-requiring enzyme {ECO:0000313|EMBL:CDA71120.1}; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprocola CAG:162.;"
oxaloacetate decarboxylase
L3_122_000M1_scaffold_248_23
Bacteroides coprocola CAG:162, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34909..35166)
DNA (258bp) protein (86aa)
Sodium pump decarboxylase, gamma subunit n=2 Tax=Bacteroides RepID=B3JI10_9BACE
Sodium pump decarboxylase gamma subunit {ECO:0000313|EMBL:CDA71121.1}; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprocola CAG:162.;"
hypothetical protein
L3_122_000M1_scaffold_248_24
Bacteroides coprocola, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35292..35795)
DNA (504bp) protein (168aa)
Nitroreductase family protein n=2 Tax=Bacteroides RepID=B3JI11_9BACE
Nitroreductase family protein {ECO:0000313|EMBL:EDV01435.1}; TaxID=470145 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprocola DSM 17136.;"
nitroreductase
L3_122_000M1_scaffold_248_25
Bacteroides coprocola CAG:162, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35913..36572)
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Bacteroides coprocola CAG:162 RepID=R6C3X1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDA71123.1}; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprocola CAG:162.;"
hypothetical protein
L3_122_000M1_scaffold_248_26
Bacteroides coprocola, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36823..37476
DNA (654bp) protein (218aa)
HAD-superfamily hydrolase (EC:3.1.3.18)
HAD hydrolase, family IA, variant 1 n=1 Tax=Bacteroides coprocola DSM 17136 RepID=B3JI14_9BACE
HAD hydrolase, family IA, variant 1 {ECO:0000313|EMBL:EDV01438.1}; TaxID=470145 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprocola DSM 17136.;"
L3_122_000M1_scaffold_248_27
Bacteroides coprocola CAG:162, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(37533..38513)
DNA (981bp) protein (327aa)
ATP-dependent 6-phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339}; Short=ATP-PFK {ECO:0000256|HAMAP-Rule:MF_00339};; Short=Phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339};; EC=2.7.1.11 {ECO:0000256|HAMAP-Rule:MF_00339};; Phosphohexokinase {ECO:0000256|HAMAP-Rule:MF_00339}; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprocola CAG:162.;"
6-phosphofructokinase (EC:2.7.1.11)
6-phosphofructokinase n=1 Tax=Bacteroides coprocola CAG:162 RepID=R6C6H4_9BACE
L3_122_000M1_scaffold_248_28
Bacteroides coprocola CAG:162, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

38815..40527
DNA (1713bp) protein (571aa)
Glycosyl hydrolase family 43 n=1 Tax=Bacteroides coprocola CAG:162 RepID=R6CI02_9BACE
Glycosyl hydrolase family 43 {ECO:0000313|EMBL:CDA71126.1}; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprocola CAG:162.;"
xylan 1,4-beta-xylosidase
L3_122_000M1_scaffold_248_29
Bacteroides coprocola CAG:162, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(40624..41280)
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Bacteroides coprocola CAG:162 RepID=R6D0I2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDA71127.1}; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprocola CAG:162.;"
hypothetical protein
L3_122_000M1_scaffold_248_30
Bacteroides coprocola CAG:162, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(41441..42100)
DNA (660bp) protein (220aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=B3JI20_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDA71128.1}; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprocola CAG:162.;"
hypothetical protein
Displaying items 1-30 of 40 in total

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