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L3_122_000M1_scaffold_253

Search features with annotation key words

Displaying items 1-30 of 78 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_122_000M1_scaffold_253_1
unknown

Not on your lists

comp(3..224)
DNA (222bp) protein (74aa)

This feature has no annotations

L3_122_000M1_scaffold_253_2
unknown

Not on your lists

comp(251..769)
DNA (519bp) protein (173aa)

This feature has no annotations

L3_122_000M1_scaffold_253_3
unknown

Not on your lists

comp(822..1310)
DNA (489bp) protein (163aa)

This feature has no annotations

L3_122_000M1_scaffold_253_4
Lactobacillus delbrueckii, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1425..1835)
DNA (411bp) protein (137aa)
Transposase-like protein n=4 Tax=Lactobacillus delbrueckii RepID=D8FPP8_LACDE
Transposase {ECO:0000313|EMBL:EPB99436.1}; TaxID=1269760 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus delbrueckii subsp. lactis CRL581.;"
L3_122_000M1_scaffold_253_5
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2060..2542
DNA (483bp) protein (161aa)
DNA-binding helix-turn-helix protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J718_9CLOT
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:CCY44692.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Predicted transcriptional regulators
L3_122_000M1_scaffold_253_6
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2607..4382)
DNA (1776bp) protein (592aa)
Bacterial Ig-like domain (Group 2) n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KQ81_9FIRM
Bacterial Ig-like domain (group 2).
Bacterial Ig-like domain (Group 2) {ECO:0000313|EMBL:CBL09033.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_122_000M1_scaffold_253_7
unknown

Not on your lists

comp(4436..4597)
DNA (162bp) protein (54aa)

This feature has no annotations

L3_122_000M1_scaffold_253_8
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5158..6528)
DNA (1371bp) protein (457aa)
Site-specific DNA methylase n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GTS2_CLOSY
Site-specific DNA methylase {ECO:0000313|EMBL:EGA91801.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
C-5 cytosine-specific DNA methylase
L3_122_000M1_scaffold_253_9
unknown

Not on your lists

comp(6672..7301)
DNA (630bp) protein (210aa)

This feature has no annotations

L3_122_000M1_scaffold_253_10
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7399..7680)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z405_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM52215.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
L3_122_000M1_scaffold_253_11
unknown

Not on your lists

comp(7692..7823)
DNA (132bp) protein (44aa)

This feature has no annotations

L3_122_000M1_scaffold_253_12
unknown

Not on your lists

comp(7829..8074)
DNA (246bp) protein (82aa)

This feature has no annotations

L3_122_000M1_scaffold_253_13
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8105..8572)
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Dorea formicigenerans ATCC 27755 RepID=B0G4G7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDR47619.1}; TaxID=411461 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans ATCC 27755.;"
hypothetical protein
L3_122_000M1_scaffold_253_14
unknown

Not on your lists

comp(8620..8994)
DNA (375bp) protein (125aa)

This feature has no annotations

L3_122_000M1_scaffold_253_15
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9024..9386)
DNA (363bp) protein (121aa)
Gp26 n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GQD4_CLOSY
Gp26 {ECO:0000313|EMBL:EGA92981.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L3_122_000M1_scaffold_253_16
Firmicutes bacterium CAG:95, Firmicutes, Bacteria

Not on your lists

comp(9405..10214)
DNA (810bp) protein (270aa)
DNA methyltransferase (EC:2.1.1.72)
D12 class N6 adenine-specific DNA methyltransferase n=1 Tax=Firmicutes bacterium CAG:95 RepID=R7N5L3_9FIRM
D12 class N6 adenine-specific DNA methyltransferase {ECO:0000313|EMBL:CDF07393.1}; TaxID=1262988 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:95.;"
L3_122_000M1_scaffold_253_17
unknown

Not on your lists

comp(10221..10862)
DNA (642bp) protein (214aa)

This feature has no annotations

L3_122_000M1_scaffold_253_18
unknown

Not on your lists

comp(10872..11093)
DNA (222bp) protein (74aa)

This feature has no annotations

L3_122_000M1_scaffold_253_19
unknown

Not on your lists

comp(11120..11314)
DNA (195bp) protein (65aa)

This feature has no annotations

L3_122_000M1_scaffold_253_20
unknown

Not on your lists

comp(11392..11565)
DNA (174bp) protein (58aa)

This feature has no annotations

L3_122_000M1_scaffold_253_21
unknown

Not on your lists

comp(11725..12369)
DNA (645bp) protein (215aa)
hypothetical protein n=1 Tax=Clostridium beijerinckii RepID=UPI0002E70E12
hypothetical protein
L3_122_000M1_scaffold_253_22
Desulfosporosinus sp. I2, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12400..12837)
DNA (438bp) protein (146aa)
hypothetical protein n=1 Tax=Clostridium beijerinckii RepID=UPI00031BFA99
Uncharacterized protein {ECO:0000313|EMBL:KJR48951.1}; TaxID=1617025 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. I2.;"
hypothetical protein
L3_122_000M1_scaffold_253_23
Sporomusa ovata, Sporomusa, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(12847..13479)
DNA (633bp) protein (211aa)
hypothetical protein n=1 Tax=Clostridium beijerinckii RepID=UPI00037B065C
Uncharacterized protein {ECO:0000313|EMBL:EQB27431.1}; TaxID=1123288 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Sporomusa.;" source="Sporomusa ovata DSM 2662.;"
hypothetical protein
L3_122_000M1_scaffold_253_24
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13540..13788)
DNA (249bp) protein (83aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KNR3_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL08515.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_122_000M1_scaffold_253_25
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13879..16851)
DNA (2973bp) protein (991aa)
Putative uncharacterized protein n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T2E9_ROSHA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN96172.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_122_000M1_scaffold_253_26
unknown

Not on your lists

comp(16864..17511)
DNA (648bp) protein (216aa)

This feature has no annotations

L3_122_000M1_scaffold_253_27
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17579..18289)
DNA (711bp) protein (237aa)
SAF domain n=1 Tax=Clostridium sp. CAG:91 RepID=R6X9F1_9CLOT
SAF domain {ECO:0000313|EMBL:CDD02977.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
L3_122_000M1_scaffold_253_28
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

comp(18308..18889)
DNA (582bp) protein (194aa)
Hypothetical secreted protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EXC8_9FIRM
Hypothetical secreted protein {ECO:0000313|EMBL:CDB01789.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
L3_122_000M1_scaffold_253_29
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18901..19338)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2D1R3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI90705.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
L3_122_000M1_scaffold_253_30
unknown

Not on your lists

comp(19419..19646)
DNA (228bp) protein (76aa)

This feature has no annotations

Displaying items 1-30 of 78 in total

View Taxonomy