ggKbase home page

L3_122_000M1_scaffold_274

Search features with annotation key words

Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_122_000M1_scaffold_274_1
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

106..672
DNA (567bp) protein (189aa)
Low molecular weight protein-tyrosine-phosphatase n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HAT6_9FIRM
Low molecular weight protein-tyrosine-phosphatase {ECO:0000313|EMBL:CDE36505.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
low molecular weight protein-tyrosine-phosphatase
L3_122_000M1_scaffold_274_2
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(681..1628)
DNA (948bp) protein (316aa)
Transcriptional regulator AraC family n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H9Z3_9FIRM
Transcriptional regulator AraC family {ECO:0000313|EMBL:CDE36504.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
AraC-type DNA-binding domain-containing proteins
L3_122_000M1_scaffold_274_3
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1952..4255
DNA (2304bp) protein (768aa)
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
Phosphorylase n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HC04_9FIRM
starch phosphorylase
L3_122_000M1_scaffold_274_4
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4491..6257)
DNA (1767bp) protein (589aa)
Putative membrane protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HE76_9FIRM
Putative membrane protein {ECO:0000313|EMBL:CDE36502.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
hypothetical protein
L3_122_000M1_scaffold_274_5
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6254..6754)
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HB05_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE36501.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
hypothetical protein
L3_122_000M1_scaffold_274_6
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6785..8938)
DNA (2154bp) protein (718aa)
Putative membrane protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HAT2_9FIRM
Putative membrane protein {ECO:0000313|EMBL:CDE36500.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
hypothetical protein
L3_122_000M1_scaffold_274_7
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9114..10649
DNA (1536bp) protein (512aa)
Two-component system response regulator YesN n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H9Y8_9FIRM
Two-component system response regulator YesN {ECO:0000313|EMBL:CDE36499.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
two-component system response regulator YesN
L3_122_000M1_scaffold_274_8
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10651..12462
DNA (1812bp) protein (604aa)
Two-component system sensor histidine kinase YesM n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HBZ9_9FIRM
Two-component system sensor histidine kinase YesM {ECO:0000313|EMBL:CDE36498.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
two-component system sensor histidine kinase YesM
L3_122_000M1_scaffold_274_9
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12581..13489
DNA (909bp) protein (303aa)
Quinolinate synthase A {ECO:0000256|HAMAP-Rule:MF_00568}; EC=2.5.1.72 {ECO:0000256|HAMAP-Rule:MF_00568};; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
Quinolinate synthase A n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HE72_9FIRM
quinolinate synthetase A
L3_122_000M1_scaffold_274_10
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13509..14864
DNA (1356bp) protein (452aa)
Aspartate oxidase (EC:1.4.3.16)
FAD binding domain protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HB00_9FIRM
FAD binding domain protein {ECO:0000313|EMBL:CDE36496.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
L3_122_000M1_scaffold_274_11
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14830..15681
DNA (852bp) protein (284aa)
nicotinate-nucleotide pyrophosphorylase (EC:2.4.2.19)
Nicotinate-nucleotide diphosphorylase n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HAS8_9FIRM
Nicotinate-nucleotide diphosphorylase {ECO:0000313|EMBL:CDE36495.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
L3_122_000M1_scaffold_274_12
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15811..17712
DNA (1902bp) protein (634aa)
Putative oligopeptide transporter OPT family n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H9Y3_9FIRM
Putative oligopeptide transporter OPT family {ECO:0000313|EMBL:CDE36494.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
putative oligopeptide transporter, OPT family
L3_122_000M1_scaffold_274_13
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17693..18049
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HBZ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE36493.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
Coenzyme PQQ synthesis protein D (PqqD).
L3_122_000M1_scaffold_274_14
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18225..19487
DNA (1263bp) protein (421aa)
Maltose/maltodextrin transport system substrate-binding protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HE69_9FIRM
Maltose/maltodextrin transport system substrate-binding protein {ECO:0000313|EMBL:CDE36492.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
maltose/maltodextrin transport system substrate-binding protein
L3_122_000M1_scaffold_274_15
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19521..20852
DNA (1332bp) protein (444aa)
Maltose/maltodextrin transport system permease protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HAZ5_9FIRM
Maltose/maltodextrin transport system permease protein {ECO:0000313|EMBL:CDE36491.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
maltose/maltodextrin transport system permease
L3_122_000M1_scaffold_274_16
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20849..21697
DNA (849bp) protein (283aa)
Maltose/maltodextrin transport system permease protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HAS3_9FIRM
Maltose/maltodextrin transport system permease protein {ECO:0000313|EMBL:CDE36490.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
maltose/maltodextrin transport system permease
L3_122_000M1_scaffold_274_17
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21949..23640
DNA (1692bp) protein (564aa)
Multiple sugar transport system substrate-binding protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H9X9_9FIRM
Multiple sugar transport system substrate-binding protein {ECO:0000313|EMBL:CDE36489.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
sugar ABC transporter substrate-binding protein
L3_122_000M1_scaffold_274_18
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23637..25484
DNA (1848bp) protein (616aa)
ATP-dependent DNA helicase, RecQ-like (EC:3.6.1.-)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HBY9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE36488.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
L3_122_000M1_scaffold_274_19
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25531..26892
DNA (1362bp) protein (454aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HE65_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE36487.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
MATE family multidrug resistance protein
L3_122_000M1_scaffold_274_20
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27267..28094
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HAZ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE36486.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
hypothetical protein
L3_122_000M1_scaffold_274_21
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28136..29428
DNA (1293bp) protein (431aa)
Putative ATP synthase F0 A subunit n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HAR9_9FIRM
Putative ATP synthase F0 A subunit {ECO:0000313|EMBL:CDE36485.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
hypothetical protein
L3_122_000M1_scaffold_274_22
Roseburia sp. CAG:182, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29741..31087
DNA (1347bp) protein (449aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:182 RepID=R7QUY5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF42387.1}; TaxID=1262942 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:182.;"
Predicted ATPase (AAA+ superfamily)
L3_122_000M1_scaffold_274_23
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31157..32884
DNA (1728bp) protein (576aa)
ABC transporter permease/ATP-binding protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H9X5_9FIRM
ABC transporter permease/ATP-binding protein {ECO:0000313|EMBL:CDE36484.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
ABC-type multidrug transport system, ATPase and permease components
L3_122_000M1_scaffold_274_24
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32884..34740
DNA (1857bp) protein (619aa)
ATP-binding cassette subfamily B bacterial n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HBY4_9FIRM
ATP-binding cassette subfamily B bacterial {ECO:0000313|EMBL:CDE36483.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
ATP-binding cassette subfamily B protein
L3_122_000M1_scaffold_274_25
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34744..35376
DNA (633bp) protein (211aa)
Transcriptional regulator MarR family n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HE62_9FIRM
Transcriptional regulator MarR family {ECO:0000313|EMBL:CDE36482.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
hypothetical protein
L3_122_000M1_scaffold_274_26
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35485..35736
DNA (252bp) protein (84aa)
Sporulation transcriptional regulator SpoIIID n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HAY5_9FIRM
Sporulation transcriptional regulator SpoIIID {ECO:0000313|EMBL:CDE36481.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
Stage III sporulation protein D.
L3_122_000M1_scaffold_274_27
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35889..36992)
DNA (1104bp) protein (368aa)
Putative two-component system response regulator n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HAR5_9FIRM
Putative two-component system response regulator {ECO:0000313|EMBL:CDE36480.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
two-component system response regulator
L3_122_000M1_scaffold_274_28
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37207..38580
DNA (1374bp) protein (458aa)
S-adenosylmethionine synthase {ECO:0000256|RuleBase:RU000541}; EC=2.5.1.6 {ECO:0000256|RuleBase:RU000541};; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
S-adenosylmethionine synthase n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H9X1_9FIRM
S-adenosylmethionine synthetase
L3_122_000M1_scaffold_274_29
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

38830..39633
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HBX8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE36478.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
Predicted membrane protein
L3_122_000M1_scaffold_274_30
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

39697..40791
DNA (1095bp) protein (365aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HE57_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE36477.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
rod shape-determining protein MreB
Displaying items 1-30 of 52 in total

View Taxonomy