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L3_122_000M1_scaffold_308

Search features with annotation key words

Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_122_000M1_scaffold_308_1
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(136..1344)
DNA (1209bp) protein (403aa)
4Fe-4S binding domain protein n=1 Tax=Paraprevotella clara CAG:116 RepID=R5NGQ4_9BACT
4Fe-4S binding domain protein {ECO:0000313|EMBL:CCZ01249.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
Hypothetical protein
L3_122_000M1_scaffold_308_2
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1410..2543)
DNA (1134bp) protein (378aa)
Glycosyl transferase group 1 n=1 Tax=Paraprevotella clara CAG:116 RepID=R5NC01_9BACT
Glycosyl transferase group 1 {ECO:0000313|EMBL:CCZ01248.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
group 1 glycosyl transferase
L3_122_000M1_scaffold_308_3
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2919..4022)
DNA (1104bp) protein (368aa)
Glycosyl transferase group 2 family n=1 Tax=Paraprevotella clara CAG:116 RepID=R5NWH4_9BACT
Glycosyl transferase group 2 family {ECO:0000313|EMBL:CCZ01247.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
hypothetical protein
L3_122_000M1_scaffold_308_4
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(4012..4542)
DNA (531bp) protein (177aa)
Serine acetyltransferase n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VUM0_DYAFD
transferase hexapeptide repeat containing protein
Transferase hexapeptide repeat containing protein {ECO:0000313|EMBL:ACT91329.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
L3_122_000M1_scaffold_308_5
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4539..5708)
DNA (1170bp) protein (390aa)
Uncharacterized protein n=1 Tax=Paraprevotella clara CAG:116 RepID=R5NV32_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCZ01246.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
hypothetical protein
L3_122_000M1_scaffold_308_6
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5716..7008)
DNA (1293bp) protein (431aa)
Uncharacterized protein n=1 Tax=Paraprevotella clara CAG:116 RepID=R5NAV1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCZ01245.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
hypothetical protein
L3_122_000M1_scaffold_308_7
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7017..8771)
DNA (1755bp) protein (585aa)
Thiamine pyrophosphate TPP-binding domain-containing protein n=1 Tax=Paraprevotella clara CAG:116 RepID=R5NGQ1_9BACT
Thiamine pyrophosphate TPP-binding domain-containing protein {ECO:0000313|EMBL:CCZ01244.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
thiamine pyrophosphate TPP-binding domain-containing protein
L3_122_000M1_scaffold_308_8
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8829..9902)
DNA (1074bp) protein (358aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Paraprevotella clara CAG:116 RepID=R5NBZ5_9BACT
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:CCZ01243.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
NAD-dependent epimerase/dehydratase
L3_122_000M1_scaffold_308_9
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9899..11416)
DNA (1518bp) protein (506aa)
Polysaccharide biosynthesis protein n=1 Tax=Paraprevotella clara CAG:116 RepID=R5NWH0_9BACT
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:CCZ01242.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
polysaccharide biosynthesis protein
L3_122_000M1_scaffold_308_10
unknown

Not on your lists

11699..11884
DNA (186bp) protein (62aa)

This feature has no annotations

L3_122_000M1_scaffold_308_11
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12398..13930)
DNA (1533bp) protein (511aa)
Uncharacterized protein n=1 Tax=Paraprevotella clara CAG:116 RepID=R5NV28_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCZ01241.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
ATPase AAA
L3_122_000M1_scaffold_308_12
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14009..14950)
DNA (942bp) protein (314aa)
Transcription termination/antitermination factor NusG n=1 Tax=Paraprevotella clara CAG:116 RepID=R5NAU6_9BACT
Transcription termination/antitermination factor NusG {ECO:0000313|EMBL:CCZ01240.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
hypothetical protein
L3_122_000M1_scaffold_308_13
Paraprevotella clara, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15568..16998)
DNA (1431bp) protein (477aa)
Peptidase, S54 family n=2 Tax=Bacteroidetes RepID=F3XYU3_9FLAO
Peptidase, S54 family {ECO:0000313|EMBL:EHH00418.1}; TaxID=762968 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella clara YIT 11840.;"
hypothetical protein
L3_122_000M1_scaffold_308_14
Paraprevotella clara, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17107..17739)
DNA (633bp) protein (211aa)
Conserved domain protein n=2 Tax=Bacteroidetes RepID=F3XYU2_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EHH00419.1}; TaxID=762968 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella clara YIT 11840.;"
hypothetical protein
L3_122_000M1_scaffold_308_15
Paraprevotella clara, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17973..19700
DNA (1728bp) protein (576aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00252}; TaxID=762968 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella clara YIT 11840.;"
Lysyl-tRNA synthetase (class II) (EC:6.1.1.6)
Lysine--tRNA ligase n=2 Tax=Bacteroidetes RepID=F3XYU1_9FLAO
L3_122_000M1_scaffold_308_16
Paraprevotella clara, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19713..20708
DNA (996bp) protein (332aa)
Glycerol-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU000439}; EC=1.1.1.94 {ECO:0000256|RuleBase:RU000439};; TaxID=762968 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella clara YIT 11840.;"
Glycerol-3-phosphate dehydrogenase n=2 Tax=Bacteroidetes RepID=F3XYU0_9FLAO
glycerol-3-phosphate dehydrogenase
L3_122_000M1_scaffold_308_17
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20739..22088
DNA (1350bp) protein (450aa)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612};; Phosphoglucose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Phosphohexose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
pgi; glucose-6-phosphate isomerase (EC:5.3.1.9)
Glucose-6-phosphate isomerase n=1 Tax=Paraprevotella clara CAG:116 RepID=R5NGP2_9BACT
L3_122_000M1_scaffold_308_18
Paraprevotella clara, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22093..22821
DNA (729bp) protein (243aa)
HAD hydrolase, family IA, variant 3 n=2 Tax=Bacteroidetes RepID=F3XYT8_9FLAO
HAD hydrolase, family IA, variant 3 {ECO:0000313|EMBL:EHH00423.1}; TaxID=762968 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella clara YIT 11840.;"
beta-phosphoglucomutase
L3_122_000M1_scaffold_308_19
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22842..23264
DNA (423bp) protein (141aa)
Putative phenylacetic acid degradation protein PaaD n=1 Tax=Paraprevotella clara CAG:116 RepID=R5NWG2_9BACT
Putative phenylacetic acid degradation protein PaaD {ECO:0000313|EMBL:CCZ01232.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
phenylacetic acid degradation protein
L3_122_000M1_scaffold_308_20
Paraprevotella clara, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23261..23944
DNA (684bp) protein (228aa)
Response regulator receiver domain protein n=2 Tax=Bacteroidetes RepID=F3XYT6_9FLAO
Response regulator receiver domain protein {ECO:0000313|EMBL:EHH00425.1}; TaxID=762968 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella clara YIT 11840.;"
two-component system response regulator
L3_122_000M1_scaffold_308_21
Paraprevotella clara, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23963..25237
DNA (1275bp) protein (425aa)
Histidine kinase A domain protein n=2 Tax=Bacteroidetes RepID=F3XYT5_9FLAO
Histidine kinase A domain protein {ECO:0000313|EMBL:EHH00426.1}; TaxID=762968 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella clara YIT 11840.;"
two-component system sensor histidine kinase
L3_122_000M1_scaffold_308_22
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25329..25769
DNA (441bp) protein (147aa)
Uncharacterized protein n=3 Tax=Bacteroidetes RepID=F3XYT4_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:CCZ01229.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
hypothetical protein
L3_122_000M1_scaffold_308_23
Paraprevotella xylaniphila, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25820..26680
DNA (861bp) protein (287aa)
Conserved domain protein (Fragment) n=1 Tax=Paraprevotella xylaniphila YIT 11841 RepID=F3QWH0_9BACT
Conserved domain protein {ECO:0000313|EMBL:EGG52052.1}; Flags: Fragment;; TaxID=762982 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella xylaniphila YIT 11841.;"
hypothetical protein
L3_122_000M1_scaffold_308_24
Paraprevotella clara, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26756..28741)
DNA (1986bp) protein (662aa)
Uncharacterized protein n=2 Tax=Bacteroidetes RepID=F3XYT2_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EHH00429.1}; TaxID=762968 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella clara YIT 11840.;"
hypothetical protein
L3_122_000M1_scaffold_308_25
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28772..30442)
DNA (1671bp) protein (557aa)
O-antigen polymerase n=1 Tax=Paraprevotella clara CAG:116 RepID=R5NK40_9BACT
O-antigen polymerase {ECO:0000313|EMBL:CCZ02459.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
hypothetical protein
L3_122_000M1_scaffold_308_26
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30436..32448)
DNA (2013bp) protein (671aa)
Conserved domain protein n=1 Tax=Paraprevotella clara CAG:116 RepID=R5NE74_9BACT
Conserved domain protein {ECO:0000313|EMBL:CCZ02460.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
thiol:disulfide interchange protein DsbE
L3_122_000M1_scaffold_308_27
Paraprevotella xylaniphila, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32432..32923)
DNA (492bp) protein (164aa)
Conserved domain protein n=1 Tax=Paraprevotella xylaniphila YIT 11841 RepID=F3QWH5_9BACT
Conserved domain protein {ECO:0000313|EMBL:EGG51880.1}; TaxID=762982 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella xylaniphila YIT 11841.;"
L3_122_000M1_scaffold_308_28
Paraprevotella clara, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33282..33887
DNA (606bp) protein (202aa)
Uncharacterized protein n=2 Tax=Bacteroidetes RepID=F3XYS6_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EHH00435.1}; TaxID=762968 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella clara YIT 11840.;"
L3_122_000M1_scaffold_308_29
Paraprevotella clara, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33926..36631)
DNA (2706bp) protein (902aa)
Uncharacterized protein n=2 Tax=Bacteroidetes RepID=F3XYS9_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EHH00432.1}; TaxID=762968 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella clara YIT 11840.;"
hypothetical protein
L3_122_000M1_scaffold_308_30
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36918..37532
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Paraprevotella clara CAG:116 RepID=R5NFB0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCZ02463.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
Displaying items 1-30 of 47 in total

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