ggKbase home page

L3_122_000M1_scaffold_332

Search features with annotation key words

Displaying items 1-30 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_122_000M1_scaffold_332_1
Megamonas hypermegale, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(121..2118)
DNA (1998bp) protein (666aa)
DNA gyrase subunit B (EC:5.99.1.3)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=657316 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas hypermegale ART12/1.;"
DNA gyrase subunit B n=3 Tax=Megamonas RepID=D4KHN0_9FIRM
L3_122_000M1_scaffold_332_2
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

2478..3824
DNA (1347bp) protein (449aa)
Amino acid carrier protein n=1 Tax=Megamonas funiformis YIT 11815 RepID=H3K8V0_9FIRM
Amino acid carrier protein {ECO:0000313|EMBL:EHR35807.1}; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
amino acid carrier protein
L3_122_000M1_scaffold_332_3
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(4096..5133)
DNA (1038bp) protein (346aa)
Hydrogenase expression/formation protein HypE n=1 Tax=Megamonas funiformis YIT 11815 RepID=H3K8V1_9FIRM
Hydrogenase expression/formation protein HypE {ECO:0000313|EMBL:EHR35808.1}; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
hypE; putative hydrogenase expression/formation protein HypE
L3_122_000M1_scaffold_332_4
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(5148..6245)
DNA (1098bp) protein (366aa)
Hydrogenase expression/formation protein HypD n=1 Tax=Megamonas funiformis YIT 11815 RepID=H3K8V2_9FIRM
Hydrogenase expression/formation protein HypD {ECO:0000313|EMBL:EHR35809.1}; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
hydrogenase expression/formation protein HypD
L3_122_000M1_scaffold_332_5
Megamonas funiformis CAG:377, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(6196..6459)
DNA (264bp) protein (88aa)
Hydrogenase assembly chaperone HypC/HupF n=2 Tax=Megamonas RepID=H3K8V3_9FIRM
Hydrogenase assembly chaperone HypC/HupF {ECO:0000313|EMBL:CDB98455.1}; TaxID=1263086 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas; environmental samples.;" source="Megamonas funiformis CAG:377.;"
hydrogenase assembly chaperone HypC/HupF
L3_122_000M1_scaffold_332_6
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(6475..8784)
DNA (2310bp) protein (770aa)
Carbamoyltransferase HypF n=1 Tax=Megamonas funiformis YIT 11815 RepID=H3K8V4_9FIRM
Carbamoyltransferase HypF {ECO:0000313|EMBL:EHR35811.1}; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
[NiFe] hydrogenase maturation protein HypF
L3_122_000M1_scaffold_332_7
Megamonas funiformis CAG:377, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(8760..9236)
DNA (477bp) protein (159aa)
hydrogenase maturation protease (EC:3.4.24.-)
Hydrogenase maturation protease n=3 Tax=Megamonas RepID=D4KHM4_9FIRM
Hydrogenase maturation protease {ECO:0000313|EMBL:CDB98447.1}; TaxID=1263086 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas; environmental samples.;" source="Megamonas funiformis CAG:377.;"
L3_122_000M1_scaffold_332_8
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(9239..9913)
DNA (675bp) protein (225aa)
hydantoin utilization protein A n=1 Tax=Megamonas rupellensis RepID=UPI0003718D21
Hydrogenase accessory protein HypB {ECO:0000313|EMBL:EHR35813.1}; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
hydrogenase accessory protein HypB
L3_122_000M1_scaffold_332_9
Megamonas funiformis CAG:377, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(9914..10255)
DNA (342bp) protein (114aa)
Probable hydrogenase nickel incorporation protein HypA n=3 Tax=Megamonas RepID=D4KHM2_9FIRM
hydrogenase nickel insertion protein HypA
Probable hydrogenase nickel incorporation protein HypA {ECO:0000256|HAMAP-Rule:MF_00213}; TaxID=1263086 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas; environmental samples.;" source="Megamonas funiformis CAG:377.;"
L3_122_000M1_scaffold_332_10
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(10305..10547)
DNA (243bp) protein (81aa)
Putative uncharacterized protein n=1 Tax=Megamonas funiformis YIT 11815 RepID=H3K8V8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHR35815.1}; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
hypothetical protein
L3_122_000M1_scaffold_332_11
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(10563..11294)
DNA (732bp) protein (244aa)
Ni/Fe-hydrogenase, b-type cytochrome subunit n=1 Tax=Megamonas funiformis YIT 11815 RepID=H3K8V9_9FIRM
Ni/Fe-hydrogenase, b-type cytochrome subunit {ECO:0000313|EMBL:EHR35816.1}; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
Ni,Fe-hydrogenase I cytochrome b subunit
L3_122_000M1_scaffold_332_12
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(11287..13188)
DNA (1902bp) protein (634aa)
Ni,Fe-hydrogenase I large subunit (EC:1.12.99.6)
Ni,Fe-hydrogenase I large subunit n=3 Tax=Megamonas RepID=D4KHL9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHR35817.1}; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
L3_122_000M1_scaffold_332_13
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(13195..14301)
DNA (1107bp) protein (369aa)
putative uptake hydrogenase small subunit (EC:1.12.99.6)
Hydrogenase (NiFe) small subunit (HydA) n=2 Tax=Megamonas RepID=H3K8W1_9FIRM
Hydrogenase (NiFe) small subunit (HydA) {ECO:0000313|EMBL:EHR35818.1}; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
L3_122_000M1_scaffold_332_14
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(14618..15478)
DNA (861bp) protein (287aa)
Putative uncharacterized protein n=1 Tax=Megamonas funiformis YIT 11815 RepID=H3K8W2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHR35819.1}; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
hypothetical protein
L3_122_000M1_scaffold_332_15
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

15667..16410
DNA (744bp) protein (248aa)
Putative uncharacterized protein n=1 Tax=Megamonas funiformis YIT 11815 RepID=H3K8W3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHR35820.1}; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
Transcriptional regulators of sugar metabolism
L3_122_000M1_scaffold_332_16
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

16411..17322
DNA (912bp) protein (304aa)
Tagatose-6-phosphate kinase {ECO:0000256|PIRNR:PIRNR000535}; EC=2.7.1.144 {ECO:0000256|PIRNR:PIRNR000535};; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
fructose-1-phosphate kinase (EC:2.7.1.56)
Tagatose-6-phosphate kinase n=1 Tax=Megamonas funiformis YIT 11815 RepID=H3K8W4_9FIRM
L3_122_000M1_scaffold_332_17
Megamonas hypermegale, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

17360..19264
DNA (1905bp) protein (635aa)
Putative uncharacterized protein n=1 Tax=Megamonas hypermegale ART12/1 RepID=D4KHL6_9FIRM
PTS system D-fructose-specific IIA component (F1P-forming), Frc family (TC 4.A.2.1.4)/PTS system D-fructose-specific IIB component (F1P-forming), Frc family (TC 4.A.2.1.4)/PTS system D-fructose-specific IIC component (F1P-forming), Frc family (TC 4.A.2.1.4)
Uncharacterized protein {ECO:0000313|EMBL:CBL05745.1}; TaxID=657316 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas hypermegale ART12/1.;"
L3_122_000M1_scaffold_332_18
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

19628..19969
DNA (342bp) protein (114aa)
Anti-anti-sigma factor n=1 Tax=Megamonas funiformis YIT 11815 RepID=H3K8W6_9FIRM
Anti-anti-sigma factor {ECO:0000313|EMBL:EHR35823.1}; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
anti-sigma-factor antagonist
L3_122_000M1_scaffold_332_19
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

19982..22078
DNA (2097bp) protein (699aa)
Glycogen debranching enzyme GlgX n=1 Tax=Megamonas funiformis YIT 11815 RepID=H3K8W7_9FIRM
Glycogen debranching enzyme GlgX {ECO:0000313|EMBL:EHR35824.1}; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
Type II secretory pathway, pullulanase PulA and related glycosidases
L3_122_000M1_scaffold_332_20
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

22106..22480
DNA (375bp) protein (125aa)
Desulfoferrodoxin n=1 Tax=Megamonas funiformis YIT 11815 RepID=H3K8W8_9FIRM
Desulfoferrodoxin {ECO:0000313|EMBL:EHR35825.1}; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
desulfoferrodoxin ferrous iron-binding domain
L3_122_000M1_scaffold_332_21
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(22531..23478)
DNA (948bp) protein (316aa)
Putative uncharacterized protein n=1 Tax=Megamonas funiformis YIT 11815 RepID=H3K8W9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHR35826.1}; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
Phosphoglycerate dehydrogenase and related dehydrogenases
L3_122_000M1_scaffold_332_22
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(23497..24801)
DNA (1305bp) protein (435aa)
M18 family aminopeptidase {ECO:0000256|RuleBase:RU004387}; EC=3.4.11.- {ECO:0000256|RuleBase:RU004387};; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
Aspartyl aminopeptidase (EC:3.4.11.21)
aminopeptidase n=1 Tax=Megamonas rupellensis RepID=UPI00037FC827
L3_122_000M1_scaffold_332_23
Megamonas hypermegale, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(24958..25503)
DNA (546bp) protein (182aa)
Rubrerythrin n=3 Tax=Megamonas RepID=D4KHL0_9FIRM
Rubrerythrin
Rubrerythrin {ECO:0000313|EMBL:CBL05739.1}; TaxID=657316 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas hypermegale ART12/1.;"
L3_122_000M1_scaffold_332_24
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

25863..26294
DNA (432bp) protein (144aa)
PTS system fructose IIA component family protein (EC:2.7.1.69)
PTS system, mannose/fructose/sorbose family, IIA component n=1 Tax=Megamonas funiformis YIT 11815 RepID=H3K8X2_9FIRM
PTS system, mannose/fructose/sorbose family, IIA component {ECO:0000313|EMBL:EHR35829.1}; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
L3_122_000M1_scaffold_332_25
Megamonas funiformis CAG:377, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

26287..27441
DNA (1155bp) protein (385aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=1263086 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas; environmental samples.;" source="Megamonas funiformis CAG:377.;"
N-acetylglucosamine-6-phosphate deacetylase (EC:3.5.1.25)
N-acetylglucosamine-6-phosphate deacetylase n=1 Tax=Megamonas funiformis CAG:377 RepID=R6NAV2_9FIRM
L3_122_000M1_scaffold_332_26
Megamonas funiformis CAG:377, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

27577..28530
DNA (954bp) protein (318aa)
Uncharacterized protein n=1 Tax=Megamonas funiformis CAG:377 RepID=R6ML94_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB95006.1}; TaxID=1263086 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas; environmental samples.;" source="Megamonas funiformis CAG:377.;"
membrane protein
L3_122_000M1_scaffold_332_27
Megamonas hypermegale, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

28542..30551
DNA (2010bp) protein (670aa)
Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain n=2 Tax=Megamonas RepID=D4KHK8_9FIRM
Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain
Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain {ECO:0000313|EMBL:CBL05737.1}; TaxID=657316 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas hypermegale ART12/1.;"
L3_122_000M1_scaffold_332_28
Megamonas funiformis CAG:377, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


30523..30966
DNA (444bp) protein (148aa)
hypothetical protein n=1 Tax=Zymophilus raffinosivorans RepID=UPI00037977A6
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; TaxID=1263086 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas; environmental samples.;" source="Megamonas funiformis CAG:377.;"
ribosomal protein L9
L3_122_000M1_scaffold_332_29
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

30976..32955
DNA (1980bp) protein (660aa)
ATP-dependent protease, Lon family (EC:3.4.21.53)
Lon family ATP-dependent protease n=1 Tax=Megamonas funiformis YIT 11815 RepID=H3K8X7_9FIRM
Lon family ATP-dependent protease {ECO:0000313|EMBL:EHR35834.1}; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
L3_122_000M1_scaffold_332_30
Megamonas funiformis CAG:377, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

32969..34306
DNA (1338bp) protein (446aa)
Replicative DNA helicase n=2 Tax=Megamonas RepID=H3K8X8_9FIRM
Replicative DNA helicase {ECO:0000313|EMBL:CDB95001.1}; TaxID=1263086 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas; environmental samples.;" source="Megamonas funiformis CAG:377.;"
replicative DNA helicase
Displaying items 1-30 of 53 in total

View Taxonomy