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L3_122_000M1_scaffold_356

Search features with annotation key words

Displaying items 1-30 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_122_000M1_scaffold_356_1
unknown

Not on your lists

comp(89..178)
DNA (90bp) protein (30aa)

This feature has no annotations

L3_122_000M1_scaffold_356_2
Firmicutes bacterium CAG:882, Firmicutes, Bacteria

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comp(235..1071)
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:882 RepID=R7BK18_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD66109.1}; TaxID=1262991 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:882.;"
hypothetical protein
L3_122_000M1_scaffold_356_3
Firmicutes bacterium CAG:882, Firmicutes, Bacteria

Not on your lists

comp(1052..2389)
DNA (1338bp) protein (446aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:882 RepID=R7BJZ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD66110.1}; TaxID=1262991 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:882.;"
hypothetical protein
L3_122_000M1_scaffold_356_4
unknown

Not on your lists

comp(2454..2915)
DNA (462bp) protein (154aa)

This feature has no annotations

L3_122_000M1_scaffold_356_5
Prevotella sp. CAG:279, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(3414..4775)
DNA (1362bp) protein (454aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=1262924 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:279.;"
histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase n=1 Tax=Prevotella sp. CAG:279 RepID=R7HKN5_9BACT
L3_122_000M1_scaffold_356_6
Prevotella sp. CAG:279, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4880..5554)
DNA (675bp) protein (225aa)
Putative neutral zinc metallopeptidase n=1 Tax=Prevotella sp. CAG:279 RepID=R7HLH8_9BACT
Putative neutral zinc metallopeptidase {ECO:0000313|EMBL:CDE40210.1}; TaxID=1262924 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:279.;"
hypothetical protein
L3_122_000M1_scaffold_356_7
Prevotella sp. CAG:279, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5670..7757)
DNA (2088bp) protein (696aa)
Uncharacterized protein n=1 Tax=Prevotella sp. CAG:279 RepID=R7HLK7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDE40211.1}; TaxID=1262924 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:279.;"
peptidase S9
L3_122_000M1_scaffold_356_8
Prevotella sp. CAG:279, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7758..9647)
DNA (1890bp) protein (630aa)
UPF0313 protein HMPREF1033_00382 n=1 Tax=Prevotella sp. CAG:279 RepID=R7HPS4_9BACT
UPF0313 protein HMPREF1033_00382 {ECO:0000313|EMBL:CDE40212.1}; TaxID=1262924 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:279.;"
hypothetical protein
L3_122_000M1_scaffold_356_9
Prevotella sp. CAG:279, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9644..11695)
DNA (2052bp) protein (684aa)
UvrABC system protein B n=1 Tax=Prevotella sp. CAG:279 RepID=R7HMS7_9BACT
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_00204}; TaxID=1262924 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:279.;"
excinuclease ABC subunit B
L3_122_000M1_scaffold_356_10
Prevotella sp. CAG:279, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11705..12553)
DNA (849bp) protein (283aa)
Uncharacterized protein n=1 Tax=Prevotella sp. CAG:279 RepID=R7HKP1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDE40214.1}; TaxID=1262924 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:279.;"
hypothetical protein
L3_122_000M1_scaffold_356_11
Prevotella sp. CAG:279, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12558..13829)
DNA (1272bp) protein (424aa)
NADH dehydrogenase n=1 Tax=Prevotella sp. CAG:279 RepID=R7HLI3_9BACT
NADH dehydrogenase {ECO:0000313|EMBL:CDE40215.1}; TaxID=1262924 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:279.;"
NADH dehydrogenase
L3_122_000M1_scaffold_356_12
Prevotella sp. CAG:279, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13845..15974
DNA (2130bp) protein (710aa)
Uncharacterized protein n=1 Tax=Prevotella sp. CAG:279 RepID=R7HPT0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDE40217.1}; TaxID=1262924 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:279.;"
hypothetical protein
L3_122_000M1_scaffold_356_13
Prevotella sp. CAG:279, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16091..18025
DNA (1935bp) protein (645aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=1262924 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:279.;"
Threonine--tRNA ligase n=1 Tax=Prevotella sp. CAG:279 RepID=R7HKP7_9BACT
threonyl-tRNA synthetase
L3_122_000M1_scaffold_356_14
Prevotella sp. CAG:279, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18035..18613
DNA (579bp) protein (193aa)
Translation initiation factor IF-3 n=1 Tax=Prevotella sp. CAG:279 RepID=R7HPT8_9BACT
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080}; TaxID=1262924 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:279.;"
translation initiation factor IF-3
L3_122_000M1_scaffold_356_15
Prevotella sp. CAG:279, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


18658..18855
DNA (198bp) protein (66aa)
50S ribosomal protein L35 n=1 Tax=Prevotella sp. CAG:279 RepID=R7HKQ3_9BACT
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=1262924 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:279.;"
50S ribosomal protein L35
L3_122_000M1_scaffold_356_16
Prevotella sp. CAG:279, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


18961..19311
DNA (351bp) protein (117aa)
50S ribosomal protein L20 n=1 Tax=Prevotella sp. CAG:279 RepID=R7HLQ0_9BACT
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=1262924 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:279.;"
50S ribosomal protein L20
L3_122_000M1_scaffold_356_17
Prevotella sp. CAG:279, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19659..20297
DNA (639bp) protein (213aa)
MarC family membrane protein n=1 Tax=Prevotella sp. CAG:279 RepID=R7HMW8_9BACT
UPF0056 membrane protein {ECO:0000256|RuleBase:RU362048}; TaxID=1262924 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:279.;"
putative amino acid transporter
L3_122_000M1_scaffold_356_18
Prevotella sp. CAG:279, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20321..20959)
DNA (639bp) protein (213aa)
Putative metallo-beta-lactamase n=1 Tax=Prevotella sp. CAG:279 RepID=R7HLM9_9BACT
Putative metallo-beta-lactamase {ECO:0000313|EMBL:CDE40235.1}; TaxID=1262924 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:279.;"
metallo-beta-lactamase
L3_122_000M1_scaffold_356_19
Prevotella sp. CAG:279, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20956..21576)
DNA (621bp) protein (207aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00277524};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00074}; TaxID=1262924 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:279.;"
Ribosomal RNA small subunit methyltransferase G n=1 Tax=Prevotella sp. CAG:279 RepID=R7HLQ9_9BACT
gidB; 16S rRNA methyltransferase GidB
L3_122_000M1_scaffold_356_20
Prevotella sp. CAG:279, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21586..22440)
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=Prevotella sp. CAG:279 RepID=R7HKU3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDE40239.1}; TaxID=1262924 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:279.;"
hypothetical protein
L3_122_000M1_scaffold_356_21
Prevotella sp. CAG:279, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22460..23341
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Prevotella sp. CAG:279 RepID=R7HLR3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDE40241.1}; TaxID=1262924 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:279.;"
GntR family transcriptional regulator
L3_122_000M1_scaffold_356_22
Prevotella sp. CAG:279, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23471..24595
DNA (1125bp) protein (375aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=1262924 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:279.;"
DNA polymerase III subunit beta n=1 Tax=Prevotella sp. CAG:279 RepID=R7HLR7_9BACT
DNA polymerase III subunit beta
L3_122_000M1_scaffold_356_23
Prevotella sp. CAG:279, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24607..25368
DNA (762bp) protein (254aa)
Exonuclease DNA polymerase III epsilon subunit family n=1 Tax=Prevotella sp. CAG:279 RepID=R7HMX8_9BACT
Exonuclease DNA polymerase III epsilon subunit family {ECO:0000313|EMBL:CDE40248.1}; TaxID=1262924 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:279.;"
Exonuclease RNase T and DNA polymerase III
L3_122_000M1_scaffold_356_24
Prevotella sp. CAG:279, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25368..26570
DNA (1203bp) protein (401aa)
Bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase n=1 Tax=Prevotella sp. CAG:279 RepID=R7HLN9_9BACT
Bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase {ECO:0000313|EMBL:CDE40250.1}; TaxID=1262924 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:279.;"
flavoprotein
L3_122_000M1_scaffold_356_25
Prevotella sp. CAG:279, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26577..27491
DNA (915bp) protein (305aa)
Uncharacterized protein n=1 Tax=Prevotella sp. CAG:279 RepID=R7HMY1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDE40253.1}; TaxID=1262924 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:279.;"
hypothetical protein
L3_122_000M1_scaffold_356_26
Prevotella sp. CAG:279, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27502..29157
DNA (1656bp) protein (552aa)
DNA repair protein RecN n=1 Tax=Prevotella sp. CAG:279 RepID=R7HLP2_9BACT
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=1262924 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:279.;"
DNA repair protein RecN
L3_122_000M1_scaffold_356_27
Tannerella sp. CAG:51, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29165..29920
DNA (756bp) protein (252aa)
RNA methyltransferase TrmH family group 3 n=2 Tax=Porphyromonadaceae RepID=R7DFV1_9PORP
RNA methyltransferase TrmH family group 3 {ECO:0000313|EMBL:CDD89121.1}; TaxID=1262979 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella; environmental samples.;" source="Tannerella sp. CAG:51.;"
RNA methyltransferase
L3_122_000M1_scaffold_356_28
Prevotella sp. CAG:279, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29967..30896
DNA (930bp) protein (310aa)
Transcription antitermination factor NusB n=1 Tax=Prevotella sp. CAG:279 RepID=R7HPY9_9BACT
Transcription antitermination factor NusB {ECO:0000313|EMBL:CDE40267.1}; TaxID=1262924 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:279.;"
nitrogen utilization substance protein
L3_122_000M1_scaffold_356_29
Prevotella sp. CAG:279, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30988..31308
DNA (321bp) protein (107aa)
Preprotein translocase YajC subunit n=1 Tax=Prevotella sp. CAG:279 RepID=R7HMZ1_9BACT
Preprotein translocase YajC subunit {ECO:0000313|EMBL:CDE40268.1}; TaxID=1262924 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:279.;"
hypothetical protein
L3_122_000M1_scaffold_356_30
Prevotella sp. CAG:279, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31407..32336
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Prevotella sp. CAG:279 RepID=R7HKX0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDE40269.1}; TaxID=1262924 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:279.;"
hypothetical protein
Displaying items 1-30 of 54 in total

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