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L3_122_000M1_scaffold_383

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Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_122_000M1_scaffold_383_1
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..618)
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae 90B3 RepID=N9ZHU7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EGA93245.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L3_122_000M1_scaffold_383_2
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(755..1213)
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Dorea sp. 5-2 RepID=R9MNJ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS72236.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
hypothetical protein
L3_122_000M1_scaffold_383_3
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1293..1469)
DNA (177bp) protein (59aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=A7AZJ4_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN78855.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
L3_122_000M1_scaffold_383_4
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1495..1914)
DNA (420bp) protein (140aa)
Uncharacterized protein n=4 Tax=root RepID=A5Z6V5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDN78856.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
hypothetical protein
L3_122_000M1_scaffold_383_5
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1927..2514)
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AZJ6_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN78857.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
Protein of unknown function (DUF2812).
L3_122_000M1_scaffold_383_6
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2511..2834)
DNA (324bp) protein (108aa)
Transcriptional regulator, PadR family n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AZJ7_RUMGN
Transcriptional regulator, PadR family {ECO:0000313|EMBL:EDN78858.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
transcriptional regulator, PadR family
L3_122_000M1_scaffold_383_7
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2967..5351)
DNA (2385bp) protein (795aa)
Efflux ABC transporter, permease protein n=2 Tax=root RepID=A7AZJ8_RUMGN
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:EDN78859.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
ABC-type transport system, involved in lipoprotein release, permease component
L3_122_000M1_scaffold_383_8
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5429..7813)
DNA (2385bp) protein (795aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GPX5_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA93235.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
permease
L3_122_000M1_scaffold_383_9
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7828..8493)
DNA (666bp) protein (222aa)
ABC transporter, ATP-binding protein n=2 Tax=Clostridiales RepID=A7AZK0_RUMGN
ABC transporter {ECO:0000313|EMBL:EGA93234.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
ABC-type antimicrobial peptide transport system, ATPase component
L3_122_000M1_scaffold_383_10
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8787..9203)
DNA (417bp) protein (139aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=A5Z5H7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM51652.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
L3_122_000M1_scaffold_383_11
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9342..10130)
DNA (789bp) protein (263aa)
Efflux ABC transporter, permease protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AZK1_RUMGN
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:EDN78862.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
putative permease
L3_122_000M1_scaffold_383_12
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10115..11998)
DNA (1884bp) protein (628aa)
Efflux ABC transporter, permease protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AZK1_RUMGN
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:EDN78862.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
permease
L3_122_000M1_scaffold_383_13
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12108..14528)
DNA (2421bp) protein (807aa)
Efflux ABC transporter, permease protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AZK2_RUMGN
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:EDN78863.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
hypothetical protein
L3_122_000M1_scaffold_383_14
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14630..14890)
DNA (261bp) protein (87aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GPX2_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA93232.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
L3_122_000M1_scaffold_383_15
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15021..16052)
DNA (1032bp) protein (344aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AZK4_RUMGN
two-component sensor histidine kinase
L3_122_000M1_scaffold_383_16
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16049..16738)
DNA (690bp) protein (230aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GPX0_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA93230.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L3_122_000M1_scaffold_383_17
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16964..17593)
DNA (630bp) protein (210aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GPW9_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA93229.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L3_122_000M1_scaffold_383_18
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17586..20060)
DNA (2475bp) protein (825aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GPW8_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA93228.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L3_122_000M1_scaffold_383_19
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20057..22174)
DNA (2118bp) protein (706aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P888_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS12134.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
hypothetical protein
L3_122_000M1_scaffold_383_20
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22285..24309)
DNA (2025bp) protein (675aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
DNA ligase n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P889_9FIRM
NAD-dependent DNA ligase
L3_122_000M1_scaffold_383_21
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24309..24632)
DNA (324bp) protein (108aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0P890_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGA93225.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L3_122_000M1_scaffold_383_22
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24629..24886)
DNA (258bp) protein (86aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GPW4_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA93224.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L3_122_000M1_scaffold_383_23
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24951..27137)
DNA (2187bp) protein (729aa)
Putative uncharacterized protein n=2 Tax=root RepID=E7GPW3_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA93223.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L3_122_000M1_scaffold_383_24
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27139..27681)
DNA (543bp) protein (181aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GPW2_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA93222.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L3_122_000M1_scaffold_383_25
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27707..28627)
DNA (921bp) protein (307aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GPW1_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA93221.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L3_122_000M1_scaffold_383_26
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28699..28947)
DNA (249bp) protein (83aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GPW0_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA93220.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L3_122_000M1_scaffold_383_27
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28963..30756)
DNA (1794bp) protein (598aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GPV9_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA93219.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L3_122_000M1_scaffold_383_28
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30799..31956)
DNA (1158bp) protein (386aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GPV8_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA93218.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L3_122_000M1_scaffold_383_29
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32026..34299)
DNA (2274bp) protein (758aa)
ATP-dependent RecD-like DNA helicase {ECO:0000256|HAMAP-Rule:MF_01488}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01488};; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
RecD/TraA family helicase (EC:3.1.11.5)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GPV7_CLOSY
L3_122_000M1_scaffold_383_30
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34315..35382)
DNA (1068bp) protein (356aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GPV6_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA93216.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
phage-type endonuclease
Displaying items 1-30 of 47 in total

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