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L3_122_000M1_scaffold_400

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_122_000M1_scaffold_400_1
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1..696
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:598 RepID=R5C3K3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KDS41434.1}; TaxID=1339341 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3776 Po2 i.;"
hypothetical protein
L3_122_000M1_scaffold_400_2
Bacteroides helcogenes, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

703..2364
DNA (1662bp) protein (554aa)
Putative lipoprotein n=1 Tax=Bacteroides helcogenes (strain ATCC 35417 / DSM 20613 / JCM 6297 / P 36-108) RepID=E6SSD6_BACT6
lipoprotein
Putative lipoprotein {ECO:0000313|EMBL:ADV45187.1}; Flags: Precursor;; TaxID=693979 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides helcogenes (strain ATCC 35417 / DSM 20613 / JCM 6297 / P; 36-108).;"
L3_122_000M1_scaffold_400_3
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


2451..4517
DNA (2067bp) protein (689aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001323}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001323};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00098}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
metG; methionyl-tRNA synthetase (EC:6.1.1.10)
Methionine--tRNA ligase n=2 Tax=Parabacteroides merdae RepID=A7AHG4_9PORP
L3_122_000M1_scaffold_400_4
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4577..5743
DNA (1167bp) protein (389aa)
DegT/DnrJ/EryC1/StrS aminotransferase family protein n=2 Tax=Parabacteroides merdae RepID=A7AHG5_9PORP
DegT/DnrJ/EryC1/StrS aminotransferase family protein {ECO:0000313|EMBL:EDN85782.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
aminotransferase
L3_122_000M1_scaffold_400_5
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5790..6866
DNA (1077bp) protein (359aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=K6BF04_9PORP
Oxidoreductase, NAD-binding domain protein {ECO:0000313|EMBL:EDN85783.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
dehydrogenase
L3_122_000M1_scaffold_400_6
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6895..7365)
DNA (471bp) protein (157aa)
Transcriptional regulator, AsnC family n=3 Tax=Parabacteroides RepID=A7AHG7_9PORP
Transcriptional regulator AsnC family {ECO:0000313|EMBL:CDD12395.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
transcriptional regulator
L3_122_000M1_scaffold_400_7
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7541..8830
DNA (1290bp) protein (430aa)
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WMI9_9PORP
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase {ECO:0000313|EMBL:CDD12393.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
O-acetylhomoserine (thiol)-lyase
L3_122_000M1_scaffold_400_8
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8980..9897)
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X7S2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD12391.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L3_122_000M1_scaffold_400_9
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9929..10816)
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WSN5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD12390.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
membrane protease subunit, stomatin/prohibitin
L3_122_000M1_scaffold_400_10
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10819..11202)
DNA (384bp) protein (128aa)
Transcriptional regulator GntR family n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WZQ5_9PORP
Transcriptional regulator GntR family {ECO:0000313|EMBL:CDD12389.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
putative transcriptional regulator
L3_122_000M1_scaffold_400_11
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11576..15454)
DNA (3879bp) protein (1293aa)
Response regulator receiver domain protein n=2 Tax=Parabacteroides merdae RepID=A7AAX3_9PORP
Response regulator receiver domain protein {ECO:0000313|EMBL:EDN87949.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
two-component system sensor histidine kinase/response regulator
L3_122_000M1_scaffold_400_12
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15610..17214)
DNA (1605bp) protein (535aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7AAX4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN87950.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
xylose ABC transporter
L3_122_000M1_scaffold_400_13
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17263..18954)
DNA (1692bp) protein (564aa)
SusD family protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WSM4_9PORP
SusD family protein {ECO:0000313|EMBL:CDD12380.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_122_000M1_scaffold_400_14
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18978..20063)
DNA (1086bp) protein (362aa)
TonB-linked outer membrane protein SusC/RagA family n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WMH5_9PORP
TonB-linked outer membrane protein SusC/RagA family {ECO:0000313|EMBL:CDD12378.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
TonB-dependent receptor
L3_122_000M1_scaffold_400_15
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20070..21740)
DNA (1671bp) protein (557aa)
TonB-linked outer membrane protein SusC/RagA family n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WMH5_9PORP
TonB-linked outer membrane protein SusC/RagA family {ECO:0000313|EMBL:CDD12378.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
TonB-dependent receptor
L3_122_000M1_scaffold_400_16
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21778..23607)
DNA (1830bp) protein (610aa)
SusD family protein n=3 Tax=Parabacteroides RepID=R6Y1M0_9PORP
SusD family protein {ECO:0000313|EMBL:CDD12377.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_122_000M1_scaffold_400_17
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23619..26747)
DNA (3129bp) protein (1043aa)
TonB-linked outer membrane protein SusC/RagA family n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WSL9_9PORP
TonB-linked outer membrane protein SusC/RagA family {ECO:0000313|EMBL:CDD12375.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_122_000M1_scaffold_400_18
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26881..26994)
DNA (114bp) protein (38aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7AAX9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD12373.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L3_122_000M1_scaffold_400_19
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27602..29869)
DNA (2268bp) protein (756aa)
TrkA C-terminal domain protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WMG6_9PORP
TrkA C-terminal domain protein {ECO:0000313|EMBL:CDD12368.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
sodium/proton antiporter
L3_122_000M1_scaffold_400_20
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30323..30754
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X7P6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD12366.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
lipoprotein
L3_122_000M1_scaffold_400_21
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31973..32266)
DNA (294bp) protein (98aa)
Excisionase family DNA binding domain-containing protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5YEQ6_9PORP
Excisionase family DNA binding domain-containing protein {ECO:0000313|EMBL:EKN12022.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
hypothetical protein
L3_122_000M1_scaffold_400_22
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32278..32571)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K6A8M5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN12023.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
hypothetical protein
L3_122_000M1_scaffold_400_23
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34193..34753
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5Z8S7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN12024.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
hypothetical protein
L3_122_000M1_scaffold_400_24
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35387..35734)
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZKK1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN12026.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
L3_122_000M1_scaffold_400_25
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36067..37065
DNA (999bp) protein (333aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5YER0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN12027.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
anti-sigma factor
L3_122_000M1_scaffold_400_26
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

37185..40580
DNA (3396bp) protein (1132aa)
SusC/RagA family TonB-linked outer membrane protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K6A8N0_9PORP
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EKN12028.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
hypothetical protein
L3_122_000M1_scaffold_400_27
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

40593..42215
DNA (1623bp) protein (541aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5Z8T2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN12029.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
hypothetical protein
L3_122_000M1_scaffold_400_28
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

42576..43133
DNA (558bp) protein (186aa)
RNA polymerase sigma-70 factor, expansion family 1 n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZL68_9PORP
RNA polymerase sigma-70 factor, expansion family 1 {ECO:0000313|EMBL:EKN12030.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
RNA polymerase sigma factor, sigma-70 family/RNA polymerase sigma-70 factor, Bacteroides expansion family 1
L3_122_000M1_scaffold_400_29
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

43313..46195
DNA (2883bp) protein (961aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZKK6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN12031.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
L3_122_000M1_scaffold_400_30
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

46202..49660
DNA (3459bp) protein (1153aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5YER4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN12032.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
hypothetical protein
Displaying items 1-30 of 35 in total

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