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L3_122_000M1_scaffold_408

Search features with annotation key words

Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_122_000M1_scaffold_408_1
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..894)
DNA (894bp) protein (298aa)
Predicted NADH:ubiquinone oxidoreductase, subunit RnfB n=2 Tax=Faecalibacterium prausnitzii RepID=D4K9T3_9FIRM
Predicted NADH:ubiquinone oxidoreductase, subunit RnfB
Predicted NADH:ubiquinone oxidoreductase, subunit RnfB {ECO:0000313|EMBL:CBL01596.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L3_122_000M1_scaffold_408_2
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(910..1542)
DNA (633bp) protein (211aa)
Electron transport complex, RnfABCDGE type, A subunit n=2 Tax=Faecalibacterium prausnitzii RepID=D4K9T2_9FIRM
electron transport complex, RnfABCDGE type, A subunit
Electron transport complex, RnfABCDGE type, A subunit {ECO:0000313|EMBL:EDP22004.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
L3_122_000M1_scaffold_408_3
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1544..2209)
DNA (666bp) protein (222aa)
Electron transport complex, RnfABCDGE type, E subunit n=2 Tax=Faecalibacterium prausnitzii RepID=D4K9T1_9FIRM
electron transport complex, RnfABCDGE type, E subunit
Electron transport complex subunit E {ECO:0000256|HAMAP-Rule:MF_00478}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L3_122_000M1_scaffold_408_4
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2227..2781)
DNA (555bp) protein (185aa)
Predicted NADH:ubiquinone oxidoreductase, subunit RnfG n=2 Tax=Faecalibacterium prausnitzii RepID=D4K9T0_9FIRM
Predicted NADH:ubiquinone oxidoreductase, subunit RnfG
Predicted NADH:ubiquinone oxidoreductase, subunit RnfG {ECO:0000313|EMBL:CBL01593.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L3_122_000M1_scaffold_408_5
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2778..3737)
DNA (960bp) protein (320aa)
Electron transport complex, RnfABCDGE type, D subunit n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SAC5_9FIRM
Electron transport complex subunit D {ECO:0000256|HAMAP-Rule:MF_00462}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
electron transport complex, RnfABCDGE type, D subunit
L3_122_000M1_scaffold_408_6
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3737..5053)
DNA (1317bp) protein (439aa)
Electron transport complex, RnfABCDGE type, C subunit n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SAC4_9FIRM
Electron transport complex subunit C {ECO:0000256|HAMAP-Rule:MF_00461}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
electron transport complex, RnfABCDGE type, C subunit
L3_122_000M1_scaffold_408_7
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5530..5655
DNA (126bp) protein (42aa)
Uncharacterized protein n=2 Tax=Faecalibacterium prausnitzii RepID=A8SAC3_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL01591.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L3_122_000M1_scaffold_408_8
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5772..6371)
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SAC2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDP21998.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
hypothetical protein
L3_122_000M1_scaffold_408_9
unknown

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comp(6771..7313)
DNA (543bp) protein (181aa)

This feature has no annotations

L3_122_000M1_scaffold_408_10
unknown

Not on your lists

comp(7434..7940)
DNA (507bp) protein (169aa)

This feature has no annotations

L3_122_000M1_scaffold_408_11
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8128..8664)
DNA (537bp) protein (179aa)
Uncharacterized protein n=2 Tax=Faecalibacterium prausnitzii RepID=A8SAB9_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL01589.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L3_122_000M1_scaffold_408_12
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8669..10546)
DNA (1878bp) protein (626aa)
Predicted glycosyltransferases n=2 Tax=Faecalibacterium prausnitzii RepID=D4K9S5_9FIRM
Predicted glycosyltransferases {ECO:0000313|EMBL:CBL01588.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
Predicted glycosyltransferases
L3_122_000M1_scaffold_408_13
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10548..11291)
DNA (744bp) protein (248aa)
ABC-type polysaccharide/polyol phosphate transport system, ATPase component n=2 Tax=Faecalibacterium prausnitzii RepID=D4K9S4_9FIRM
ABC-type polysaccharide/polyol phosphate transport system, ATPase component
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDP21993.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
L3_122_000M1_scaffold_408_14
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11304..12095)
DNA (792bp) protein (264aa)
ABC-type polysaccharide/polyol phosphate export systems, permease component n=2 Tax=Faecalibacterium prausnitzii RepID=D4K9S3_9FIRM
ABC-type polysaccharide/polyol phosphate export systems, permease component
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
L3_122_000M1_scaffold_408_15
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12120..12686)
DNA (567bp) protein (189aa)
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13)
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:EDP21991.1}; EC=5.1.3.13 {ECO:0000313|EMBL:EDP21991.1};; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
dTDP-4-dehydrorhamnose 3,5-epimerase n=2 Tax=Faecalibacterium prausnitzii RepID=D4K9S2_9FIRM
L3_122_000M1_scaffold_408_16
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12756..14087)
DNA (1332bp) protein (444aa)
D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
D-alanyl-D-alanine carboxypeptidase {ECO:0000313|EMBL:CBL01584.1}; EC=3.4.16.4 {ECO:0000313|EMBL:CBL01584.1};; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
D-alanyl-D-alanine carboxypeptidase n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K9S1_9FIRM
L3_122_000M1_scaffold_408_17
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14169..14762)
DNA (594bp) protein (198aa)
Phosphopantothenoylcysteine synthetase/decarboxylase n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K9S0_9FIRM
Phosphopantothenoylcysteine synthetase/decarboxylase
Phosphopantothenoylcysteine synthetase/decarboxylase {ECO:0000313|EMBL:CBL01583.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L3_122_000M1_scaffold_408_18
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14759..15553)
DNA (795bp) protein (265aa)
Putative dipicolinic acid synthetase, A subunit n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SAB2_9FIRM
Putative dipicolinic acid synthetase, A subunit {ECO:0000313|EMBL:EDP21988.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain.
L3_122_000M1_scaffold_408_19
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15699..18278)
DNA (2580bp) protein (860aa)
Response regulator receiver domain protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZI79_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:EFQ07124.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Signal transduction histidine kinase
L3_122_000M1_scaffold_408_20
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18268..19095)
DNA (828bp) protein (276aa)
Tat pathway signal sequence domain protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZI78_9FIRM
amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-)
Amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-) {ECO:0000313|EMBL:CBK99047.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_122_000M1_scaffold_408_21
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19113..21218)
DNA (2106bp) protein (702aa)
Diguanylate cyclase (GGDEF) domain protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SAA7_9FIRM
Diguanylate cyclase (GGDEF) domain protein {ECO:0000313|EMBL:EDP21982.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
diguanylate cyclase (GGDEF) domain
L3_122_000M1_scaffold_408_22
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21553..21645)
DNA (93bp) protein (31aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K9R6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL01579.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L3_122_000M1_scaffold_408_23
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21909..23195)
DNA (1287bp) protein (429aa)
enolase (EC:4.2.1.11)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318, ECO:0000313|EMBL:CBL01578.1}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318, ECO:0000313|EMBL:CBL01578.1};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
Enolase n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K9R5_9FIRM
L3_122_000M1_scaffold_408_24
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23559..24980
DNA (1422bp) protein (474aa)
MATE efflux family protein n=2 Tax=Faecalibacterium prausnitzii RepID=A8SAA1_9FIRM
putative efflux protein, MATE family
MATE efflux family protein {ECO:0000313|EMBL:EDP21977.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
L3_122_000M1_scaffold_408_25
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25254..26453
DNA (1200bp) protein (400aa)
Tat pathway signal sequence domain protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SAA0_9FIRM
ABC-type branched-chain amino acid transport systems, periplasmic component
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:EDP21976.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
L3_122_000M1_scaffold_408_26
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26609..27487
DNA (879bp) protein (293aa)
Amino acid/amide ABC transporter membrane protein 1, HAAT family (TC 3.A.1.4.-) n=2 Tax=Faecalibacterium prausnitzii RepID=D4K9R2_9FIRM
amino acid/amide ABC transporter membrane protein 1, HAAT family (TC 3.A.1.4.-)
Amino acid/amide ABC transporter membrane protein 1, HAAT family (TC 3.A.1.4.-) {ECO:0000313|EMBL:CBL01575.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L3_122_000M1_scaffold_408_27
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27500..28528
DNA (1029bp) protein (343aa)
Branched-chain amino acid ABC transporter, permease protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SA98_9FIRM
Branched-chain amino acid ABC transporter, permease protein {ECO:0000313|EMBL:EDP21974.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
amino acid/amide ABC transporter membrane protein 2, HAAT family (TC 3.A.1.4.-)
L3_122_000M1_scaffold_408_28
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28521..29360
DNA (840bp) protein (280aa)
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family (TC 3.A.1.4.-) n=2 Tax=Faecalibacterium prausnitzii RepID=D4K9R0_9FIRM
amino acid/amide ABC transporter ATP-binding protein 1, HAAT family (TC 3.A.1.4.-)
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDP21973.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
L3_122_000M1_scaffold_408_29
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29364..30077
DNA (714bp) protein (238aa)
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family (TC 3.A.1.4.-) n=2 Tax=Faecalibacterium prausnitzii RepID=D4K9Q9_9FIRM
amino acid/amide ABC transporter ATP-binding protein 2, HAAT family (TC 3.A.1.4.-)
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDP21972.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
L3_122_000M1_scaffold_408_30
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30263..31276
DNA (1014bp) protein (338aa)
aspartate-ammonia ligase (EC:6.3.1.1)
Aspartate--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_00555, ECO:0000256|SAAS:SAAS00088413}; EC=6.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00555, ECO:0000256|SAAS:SAAS00088403};; Asparagine synthetase A {ECO:0000256|HAMAP-Rule:MF_00555}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
Aspartate--ammonia ligase n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K9Q8_9FIRM
Displaying items 1-30 of 47 in total

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