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L3_122_000M1_scaffold_428

Search features with annotation key words

Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_122_000M1_scaffold_428_1
Eubacterium sp. 14-2, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(187..1185)
DNA (999bp) protein (333aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. 14-2 RepID=S0JGB0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOT27585.1}; TaxID=1235790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 14-2.;"
hypothetical protein
L3_122_000M1_scaffold_428_2
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1294..1602)
DNA (309bp) protein (103aa)
Bacterial mobilization protein MobC n=2 Tax=Clostridiales RepID=B6FQ20_9CLOT
Bacterial mobilization protein (MobC) {ECO:0000313|EMBL:KJF39258.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
Bacterial mobilisation protein (MobC)./Ribbon-helix-helix protein, copG family.
L3_122_000M1_scaffold_428_3
unknown

Not on your lists

comp(1607..2029)
DNA (423bp) protein (141aa)

This feature has no annotations

L3_122_000M1_scaffold_428_4
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2147..2485)
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VUL8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KJF39256.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
hypothetical protein
L3_122_000M1_scaffold_428_5
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2582..3373)
DNA (792bp) protein (264aa)
Methyltransferase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362026};; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
DNA modification methylase (EC:2.1.1.72)
DNA (Cytosine-5-)-methyltransferase n=1 Tax=Clostridium leptum DSM 753 RepID=A7VQF4_9CLOT
L3_122_000M1_scaffold_428_6
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3465..4088)
DNA (624bp) protein (208aa)
Bacterial transferase hexapeptide repeat protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6RDN2_9CLOT
Bacterial transferase hexapeptide repeat protein {ECO:0000313|EMBL:CDC41001.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
hypothetical protein
L3_122_000M1_scaffold_428_7

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comp(4085..4378)
DNA (294bp) protein (98aa)
Uncharacterized protein n=2 Tax=root RepID=R6S321_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKC47217.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L3_122_000M1_scaffold_428_8
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4375..5340)
DNA (966bp) protein (322aa)
Toprim domain protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VUL4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KJF39255.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
hypothetical protein
L3_122_000M1_scaffold_428_9
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5342..6499)
DNA (1158bp) protein (386aa)
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00086}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00086};; MAT {ECO:0000256|HAMAP-Rule:MF_00086}; Methionine adenosyltransferase {ECO:0000256|HAMAP-Rule:MF_00086}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
methionine adenosyltransferase (EC:2.5.1.6)
S-adenosylmethionine synthase n=1 Tax=Clostridium leptum DSM 753 RepID=A7VUL3_9CLOT
L3_122_000M1_scaffold_428_10
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6584..7009)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=human gut metagenome RepID=K1UKS8_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:KJF38940.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
hypothetical protein
L3_122_000M1_scaffold_428_11
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6990..7481)
DNA (492bp) protein (164aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI00036D6F0B
AIG2-like family protein {ECO:0000313|EMBL:ERI96821.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
AIG2-like family.
L3_122_000M1_scaffold_428_12
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7497..8450)
DNA (954bp) protein (318aa)
Uncharacterized protein n=2 Tax=root RepID=R6QWG3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC40963.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
Putative amidoligase enzyme.
L3_122_000M1_scaffold_428_13
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8451..9479)
DNA (1029bp) protein (343aa)
Cytosine-specific methyltransferase {ECO:0000256|RuleBase:RU000417}; EC=2.1.1.37 {ECO:0000256|RuleBase:RU000417};; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
Cytosine-specific methyltransferase n=1 Tax=Clostridium leptum DSM 753 RepID=A7VQE1_9CLOT
Putative DNA (cytosine-5-)-methyltransferase
L3_122_000M1_scaffold_428_14
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9587..10054)
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6QYT2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC40965.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
hypothetical protein
L3_122_000M1_scaffold_428_15

Not on your lists

comp(10250..10531)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=human gut metagenome RepID=K1RTI0_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC46709.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
plasmid segregation centromere-binding protein ParR
L3_122_000M1_scaffold_428_16
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10528..11448)
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PQN1_9FIRM
Plasmid segregation actin-type ATPase ParM {ECO:0000313|EMBL:KJF39251.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
plasmid segregation actin-type ATPase ParM
L3_122_000M1_scaffold_428_17
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11765..12496)
DNA (732bp) protein (244aa)
Putative sortase, SrtB family n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PSL6_9FIRM
Putative sortase, SrtB family {ECO:0000313|EMBL:EFB74302.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
sortase
L3_122_000M1_scaffold_428_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12513..13616)
DNA (1104bp) protein (368aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RDD4_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT16690.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
hypothetical protein
L3_122_000M1_scaffold_428_19
Streptococcus intermedius, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(13636..17523)
DNA (3888bp) protein (1296aa)
hypothetical protein n=1 Tax=Streptococcus massiliensis RepID=UPI0003475F0A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGU75477.1}; TaxID=862967 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus anginosus group.;" source="Streptococcus intermedius B196.;"
L3_122_000M1_scaffold_428_20
Rhodococcus sp. PML026, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17520..17918)
DNA (399bp) protein (133aa)
hypothetical protein n=1 Tax=Rhodococcus rhodochrous RepID=UPI0002F19702
Serine peptidase {ECO:0000313|EMBL:KJV02521.1}; TaxID=1356405 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. PML026.;"
serine peptidase
L3_122_000M1_scaffold_428_21

Not on your lists

comp(17915..18412)
DNA (498bp) protein (166aa)
Uncharacterized protein (Fragment) n=1 Tax=human gut metagenome RepID=K1VBI8_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC81311.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L3_122_000M1_scaffold_428_22

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comp(18409..19107)
DNA (699bp) protein (233aa)
Protein containing Peptidase M23 domain protein (Fragment) n=1 Tax=human gut metagenome RepID=K1U497_9ZZZZ
Protein containing Peptidase M23 domain protein {ECO:0000313|EMBL:EKC80057.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Camelysin metallo-endopeptidase.
L3_122_000M1_scaffold_428_23
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19454..20392
DNA (939bp) protein (313aa)
Abi-like protein n=1 Tax=Lachnospiraceae bacterium 5_1_63FAA RepID=E5VLE1_9FIRM
Abi-like protein {ECO:0000313|EMBL:EFV16254.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
hypothetical protein
L3_122_000M1_scaffold_428_24
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21320..22693)
DNA (1374bp) protein (458aa)
Resolvase domain n=1 Tax=Ruminococcus albus (strain ATCC 27210 / DSM 20455 / JCM 14654 / NCDO 2250 / 7) RepID=E6UKL7_RUMA7
Resolvase domain
Resolvase domain {ECO:0000313|EMBL:ADU24213.1}; TaxID=697329 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus (strain ATCC 27210 / DSM 20455 / JCM 14654 / NCDO; 2250 / 7).;"
L3_122_000M1_scaffold_428_25
unknown

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comp(22779..22976)
DNA (198bp) protein (66aa)

This feature has no annotations

L3_122_000M1_scaffold_428_26
unknown

Not on your lists

comp(23094..23477)
DNA (384bp) protein (128aa)

This feature has no annotations

L3_122_000M1_scaffold_428_27
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23474..23860)
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PKE9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJF39289.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
L3_122_000M1_scaffold_428_28
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23881..26208)
DNA (2328bp) protein (776aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RU59_9FIRM
Rad3-related DNA helicase {ECO:0000313|EMBL:KJF38885.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
Rad3-related DNA helicases
L3_122_000M1_scaffold_428_29
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26379..26699)
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PKE5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJF39287.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
helix-turn-helix, type 11 containing protein
L3_122_000M1_scaffold_428_30
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27071..27418
DNA (348bp) protein (116aa)
Transcriptional regulator, XRE family n=1 Tax=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) RepID=B8I7M0_CLOCE
Uncharacterized protein {ECO:0000313|EMBL:KJF38162.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
XRE family transcriptional regulator
Displaying items 1-30 of 56 in total

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