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L3_122_000M1_scaffold_434

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_122_000M1_scaffold_434_1
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

629..1843
DNA (1215bp) protein (405aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K5ZKL7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN12041.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
integrase
L3_122_000M1_scaffold_434_2
unknown

Not on your lists

comp(1898..2116)
DNA (219bp) protein (73aa)

This feature has no annotations

L3_122_000M1_scaffold_434_3
Odoribacter sp. CAG:788, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2119..2523)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Odoribacter sp. CAG:788 RepID=R5PHC6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCZ08307.1}; TaxID=1262909 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter; environmental samples.;" source="Odoribacter sp. CAG:788.;"
ATP-binding region ATPase domain-containing protein
L3_122_000M1_scaffold_434_4
unknown

Not on your lists

comp(2533..2904)
DNA (372bp) protein (124aa)

This feature has no annotations

L3_122_000M1_scaffold_434_5
Bacteroides sp. 3_1_33FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3223..3450
DNA (228bp) protein (76aa)
DNA-binding helix-turn-helix protein n=1 Tax=Bacteroides sp. 3_1_33FAA RepID=D1K0W5_9BACE
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EEZ22179.1}; TaxID=457391 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_33FAA.;"
helix-turn-helix domain-containing protein
L3_122_000M1_scaffold_434_6
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3741..4040)
DNA (300bp) protein (100aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IX13_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK02360.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
hypothetical protein
L3_122_000M1_scaffold_434_7
Paraprevotella clara, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4050..4367)
DNA (318bp) protein (106aa)
Uncharacterized protein n=2 Tax=Bacteroidetes RepID=F3XWF6_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EHG98624.1}; TaxID=762968 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella clara YIT 11840.;"
hypothetical protein
L3_122_000M1_scaffold_434_8
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4782..5231
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. 20_3 RepID=E1YQ09_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KDS43851.1}; TaxID=1339341 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3776 Po2 i.;"
hypothetical protein
L3_122_000M1_scaffold_434_9
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5420..5803
DNA (384bp) protein (128aa)
Bacterial mobilisation protein (MobC) n=13 Tax=Bacteroidales RepID=D4IKK1_9BACT
Bacterial mobilisation protein (MobC).
Uncharacterized protein {ECO:0000313|EMBL:EIY71673.1}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
L3_122_000M1_scaffold_434_10
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5769..6683
DNA (915bp) protein (305aa)
Relaxase/mobilization nuclease domain protein n=1 Tax=Bacteroides sp. 4_3_47FAA RepID=C6ZB51_9BACE
Relaxase/mobilization nuclease domain protein {ECO:0000313|EMBL:EET18110.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
Relaxase/mobilization nuclease
L3_122_000M1_scaffold_434_11
unknown

Not on your lists

6688..7029
DNA (342bp) protein (114aa)

This feature has no annotations

L3_122_000M1_scaffold_434_12
Methylibium sp. T29, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7175..8077
DNA (903bp) protein (301aa)
Restriction endonuclease id=3227944 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
Restriction endonuclease {ECO:0000313|EMBL:EWS53698.1}; TaxID=1430884 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29.;"
restriction endonuclease family protein
L3_122_000M1_scaffold_434_13
unknown

Not on your lists

8146..8976
DNA (831bp) protein (277aa)

This feature has no annotations

L3_122_000M1_scaffold_434_14
Bacteroides sp. 2_2_4, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9229..9591
DNA (363bp) protein (121aa)
Helicase C-terminal domain protein n=2 Tax=Bacteroides RepID=C3R187_9BACE
Helicase C-terminal domain protein {ECO:0000313|EMBL:EEO57971.1}; TaxID=469590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_2_4.;"
DNA methylase
L3_122_000M1_scaffold_434_15
Odoribacter splanchnicus, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9661..10986)
DNA (1326bp) protein (442aa)
DUF234 DEXX-box ATPase n=1 Tax=Odoribacter splanchnicus (strain ATCC 29572 / DSM 20712 / JCM 15291 / NCTC 10825 / 1651/6) RepID=F9ZAR1_ODOSD
hypothetical protein
DUF234 DEXX-box ATPase {ECO:0000313|EMBL:ADY34387.1}; TaxID=709991 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter.;" source="Odoribacter splanchnicus (strain ATCC 29572 / DSM 20712 / JCM 15291 /; NCTC 10825 / 1651/6) (Bacteroides splanchnicus).;"
L3_122_000M1_scaffold_434_16
Odoribacter splanchnicus, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11465..12706
DNA (1242bp) protein (414aa)
Conserved hypothetical ATPase n=1 Tax=Odoribacter splanchnicus (strain ATCC 29572 / DSM 20712 / JCM 15291 / NCTC 10825 / 1651/6) RepID=F9ZAR0_ODOSD
ATPase
Conserved hypothetical ATPase {ECO:0000313|EMBL:ADY34386.1}; TaxID=709991 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter.;" source="Odoribacter splanchnicus (strain ATCC 29572 / DSM 20712 / JCM 15291 /; NCTC 10825 / 1651/6) (Bacteroides splanchnicus).;"
L3_122_000M1_scaffold_434_17
Odoribacter splanchnicus, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12714..12857
DNA (144bp) protein (48aa)
Uncharacterized protein n=1 Tax=Odoribacter splanchnicus (strain ATCC 29572 / DSM 20712 / JCM 15291 / NCTC 10825 / 1651/6) RepID=F9ZAQ9_ODOSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADY34385.1}; TaxID=709991 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter.;" source="Odoribacter splanchnicus (strain ATCC 29572 / DSM 20712 / JCM 15291 /; NCTC 10825 / 1651/6) (Bacteroides splanchnicus).;"
L3_122_000M1_scaffold_434_18
unknown

Not on your lists

13224..13547
DNA (324bp) protein (108aa)

This feature has no annotations

L3_122_000M1_scaffold_434_19
Odoribacter splanchnicus CAG:14, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14013..14759
DNA (747bp) protein (249aa)
GAF domain protein n=1 Tax=Odoribacter splanchnicus CAG:14 RepID=R6F9P5_9PORP
GAF domain protein {ECO:0000313|EMBL:CDB08850.1}; TaxID=1263090 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter; environmental samples.;" source="Odoribacter splanchnicus CAG:14.;"
GAF domain-containing protein
L3_122_000M1_scaffold_434_20
Odoribacter splanchnicus, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14766..15908
DNA (1143bp) protein (381aa)
Response regulator receiver sensor signal transduction histidine kinase n=1 Tax=Odoribacter splanchnicus (strain ATCC 29572 / DSM 20712 / JCM 15291 / NCTC 10825 / 1651/6) RepID=F9ZAQ7_ODOSD
response regulator receiver sensor signal transduction histidine kinase
Response regulator receiver sensor signal transduction histidine kinase {ECO:0000313|EMBL:ADY34383.1}; TaxID=709991 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter.;" source="Odoribacter splanchnicus (strain ATCC 29572 / DSM 20712 / JCM 15291 /; NCTC 10825 / 1651/6) (Bacteroides splanchnicus).;"
L3_122_000M1_scaffold_434_21
Odoribacter splanchnicus, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15857..16492)
DNA (636bp) protein (212aa)
3'-5' exonuclease n=1 Tax=Odoribacter splanchnicus (strain ATCC 29572 / DSM 20712 / JCM 15291 / NCTC 10825 / 1651/6) RepID=F9ZAQ6_ODOSD
3'-5' exonuclease
3'-5' exonuclease {ECO:0000313|EMBL:ADY34382.1}; TaxID=709991 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter.;" source="Odoribacter splanchnicus (strain ATCC 29572 / DSM 20712 / JCM 15291 /; NCTC 10825 / 1651/6) (Bacteroides splanchnicus).;"
L3_122_000M1_scaffold_434_22
Odoribacter splanchnicus, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16479..17009)
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Odoribacter splanchnicus (strain ATCC 29572 / DSM 20712 / JCM 15291 / NCTC 10825 / 1651/6) RepID=F9ZAQ5_ODOSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADY34381.1}; TaxID=709991 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter.;" source="Odoribacter splanchnicus (strain ATCC 29572 / DSM 20712 / JCM 15291 /; NCTC 10825 / 1651/6) (Bacteroides splanchnicus).;"
L3_122_000M1_scaffold_434_23
Odoribacter splanchnicus CAG:14, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17028..17198)
DNA (171bp) protein (57aa)
Uncharacterized protein n=1 Tax=Odoribacter splanchnicus CAG:14 RepID=R6FIS6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDB08846.1}; TaxID=1263090 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter; environmental samples.;" source="Odoribacter splanchnicus CAG:14.;"
L3_122_000M1_scaffold_434_24
Odoribacter splanchnicus, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17269..19665)
DNA (2397bp) protein (799aa)
Surface antigen (D15) n=1 Tax=Odoribacter splanchnicus (strain ATCC 29572 / DSM 20712 / JCM 15291 / NCTC 10825 / 1651/6) RepID=F9ZAQ4_ODOSD
surface antigen (D15)
Surface antigen (D15) {ECO:0000313|EMBL:ADY34380.1}; TaxID=709991 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter.;" source="Odoribacter splanchnicus (strain ATCC 29572 / DSM 20712 / JCM 15291 /; NCTC 10825 / 1651/6) (Bacteroides splanchnicus).;"
L3_122_000M1_scaffold_434_25
Odoribacter splanchnicus CAG:14, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19662..24326)
DNA (4665bp) protein (1555aa)
Uncharacterized protein n=1 Tax=Odoribacter splanchnicus CAG:14 RepID=R6FHH8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDB08844.1}; TaxID=1263090 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter; environmental samples.;" source="Odoribacter splanchnicus CAG:14.;"
hypothetical protein
L3_122_000M1_scaffold_434_26
Odoribacter splanchnicus CAG:14, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24433..25164)
DNA (732bp) protein (244aa)
Nucleotidyl transferase n=1 Tax=Odoribacter splanchnicus CAG:14 RepID=R6F6S1_9PORP
Nucleotidyl transferase {ECO:0000313|EMBL:CDB08843.1}; TaxID=1263090 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter; environmental samples.;" source="Odoribacter splanchnicus CAG:14.;"
Nucleotidyl transferase
L3_122_000M1_scaffold_434_27
Odoribacter splanchnicus, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25165..25836)
DNA (672bp) protein (224aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Odoribacter splanchnicus (strain ATCC 29572 / DSM 20712 / JCM 15291 / NCTC 10825 / 1651/6) RepID=F9ZAQ1_ODOSD
LuxR family transcriptional regulator
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:ADY34377.1}; TaxID=709991 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter.;" source="Odoribacter splanchnicus (strain ATCC 29572 / DSM 20712 / JCM 15291 /; NCTC 10825 / 1651/6) (Bacteroides splanchnicus).;"
L3_122_000M1_scaffold_434_28
Odoribacter splanchnicus, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25896..26840)
DNA (945bp) protein (315aa)
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Odoribacter splanchnicus (strain ATCC 29572 / DSM 20712 / JCM 15291 / NCTC 10825 / 1651/6) RepID=F9ZAQ0_ODOSD
integral membrane sensor signal transduction histidine kinase
Integral membrane sensor signal transduction histidine kinase {ECO:0000313|EMBL:ADY34376.1}; TaxID=709991 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter.;" source="Odoribacter splanchnicus (strain ATCC 29572 / DSM 20712 / JCM 15291 /; NCTC 10825 / 1651/6) (Bacteroides splanchnicus).;"
L3_122_000M1_scaffold_434_29
Odoribacter splanchnicus, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26857..29235)
DNA (2379bp) protein (793aa)
Surface antigen (D15) n=1 Tax=Odoribacter splanchnicus (strain ATCC 29572 / DSM 20712 / JCM 15291 / NCTC 10825 / 1651/6) RepID=F9ZAP9_ODOSD
surface antigen (D15)
Surface antigen (D15) {ECO:0000313|EMBL:ADY34375.1}; TaxID=709991 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter.;" source="Odoribacter splanchnicus (strain ATCC 29572 / DSM 20712 / JCM 15291 /; NCTC 10825 / 1651/6) (Bacteroides splanchnicus).;"
L3_122_000M1_scaffold_434_30
Odoribacter splanchnicus, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29328..30089
DNA (762bp) protein (254aa)
tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Odoribacter splanchnicus (strain ATCC 29572 / DSM 20712 / JCM 15291 / NCTC 10825 / 1651/6) RepID=F9ZAP8_ODOSD
tRNA/rRNA methyltransferase (SpoU)
tRNA/rRNA methyltransferase (SpoU) {ECO:0000313|EMBL:ADY34374.1}; TaxID=709991 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter.;" source="Odoribacter splanchnicus (strain ATCC 29572 / DSM 20712 / JCM 15291 /; NCTC 10825 / 1651/6) (Bacteroides splanchnicus).;"
Displaying items 1-30 of 44 in total

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