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L3_122_000M1_scaffold_437

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_122_000M1_scaffold_437_1
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..9600)
DNA (9600bp) protein (3200aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_46FAA RepID=F3AX83_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG83116.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
zmpB1; zinc metalloprotease ZmpB
L3_122_000M1_scaffold_437_2
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9619..10215)
DNA (597bp) protein (199aa)
Putative uncharacterized protein n=3 Tax=unclassified Lachnospiraceae RepID=E5XFB6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG83117.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
hypothetical protein
L3_122_000M1_scaffold_437_3
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10458..12200)
DNA (1743bp) protein (581aa)
Xenobiotic-transporting ATPase (EC:3.6.3.44)
ABC transporter n=4 Tax=Clostridiales RepID=E5XFB5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG83118.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
L3_122_000M1_scaffold_437_4
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12202..13926)
DNA (1725bp) protein (575aa)
Xenobiotic-transporting ATPase (EC:3.6.3.44)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R5QF81_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG83119.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
L3_122_000M1_scaffold_437_5
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13923..14498)
DNA (576bp) protein (192aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=R5QLJ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG83120.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
N-acetyltransferase GCN5
L3_122_000M1_scaffold_437_6
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14590..15399
DNA (810bp) protein (270aa)
Transcriptional regulator, MerR family n=5 Tax=Clostridiales RepID=A5KPG1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ27240.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
MerR family transcriptional regulator
L3_122_000M1_scaffold_437_7
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15386..16429)
DNA (1044bp) protein (348aa)
Threonine dehydrogenase and related Zn-dependent dehydrogenases (EC:1.1.1.1)
Uncharacterized protein n=3 Tax=root RepID=R5QY40_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG83122.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
L3_122_000M1_scaffold_437_8
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16472..16750)
DNA (279bp) protein (93aa)
Uncharacterized protein n=2 Tax=Clostridiales PF9_9FIRM">RepID=A5KPF9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ27242.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
L3_122_000M1_scaffold_437_9
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16917..19073)
DNA (2157bp) protein (719aa)
1,3-beta-galactosyl-N-acetylhexosamine phosphorylase n=4 Tax=Lachnospiraceae PF7_9FIRM">RepID=A5KPF7_9FIRM
1,3-beta-galactosyl-N-acetylhexosamine phosphorylase {ECO:0000313|EMBL:EFV20021.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
hypothetical protein
L3_122_000M1_scaffold_437_10
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19131..19310)
DNA (180bp) protein (60aa)
Uncharacterized protein n=5 Tax=Clostridiales PF6_9FIRM">RepID=A5KPF6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ27246.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
hypothetical protein
L3_122_000M1_scaffold_437_11
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19323..20216)
DNA (894bp) protein (298aa)
ABC transporter, permease protein n=5 Tax=Clostridiales PF5_9FIRM">RepID=A5KPF5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ27247.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
ABC transporter
L3_122_000M1_scaffold_437_12
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20232..21122)
DNA (891bp) protein (297aa)
ABC transporter, permease protein n=5 Tax=Clostridiales PF4_9FIRM">RepID=A5KPF4_9FIRM
Binding-protein-dependent transport system inner membrane component {ECO:0000313|EMBL:EFV20018.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
ABC transporter permease
L3_122_000M1_scaffold_437_13
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21239..22660)
DNA (1422bp) protein (474aa)
Carbohydrate ABC transporter, carbohydrate-binding protein n=5 Tax=Clostridiales PF3_9FIRM">RepID=A5KPF3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ27249.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
carbohydrate ABC transporter substrate-binding protein
L3_122_000M1_scaffold_437_14
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22915..23754
DNA (840bp) protein (280aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=R5QEY8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ27250.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
hypothetical protein
L3_122_000M1_scaffold_437_15
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23765..25117)
DNA (1353bp) protein (451aa)
MATE efflux family protein n=5 Tax=Clostridiales PF0_9FIRM">RepID=A5KPF0_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EFV20015.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
MATE efflux family protein
L3_122_000M1_scaffold_437_16
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25125..25850)
DNA (726bp) protein (242aa)
ABC transporter, ATP-binding protein n=5 Tax=Clostridiales RepID=A5KPE9_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDK23625.1}; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
nitrate/sulfonate/bicarbonate ABC transporter
L3_122_000M1_scaffold_437_17
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25928..26863)
DNA (936bp) protein (312aa)
ABC transporter, substrate-binding protein, QAT family n=4 Tax=Clostridiales RepID=A5KPE8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ27253.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
osmoprotectant ABC transporter substrate-binding/permease protein
L3_122_000M1_scaffold_437_18
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26963..27616)
DNA (654bp) protein (218aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R5QLK7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ27254.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
glycine betaine ABC transporter substrate-binding protein
L3_122_000M1_scaffold_437_19
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27620..27943)
DNA (324bp) protein (108aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=A5KPE6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG83134.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
hypothetical protein
L3_122_000M1_scaffold_437_20
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28061..29059)
DNA (999bp) protein (333aa)
birA, biotin-[acetyl-CoA-carboxylase] ligase region (EC:6.3.4.15)
Biotin--[acetyl-CoA-carboxylase] ligase n=2 Tax=Clostridiales RepID=A5KPE5_9FIRM
Bifunctional ligase/repressor BirA {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--[acetyl-CoA-carboxylase] ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--protein ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin-[acetyl-CoA carboxylase] synthetase {ECO:0000256|HAMAP-Rule:MF_00978}; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
L3_122_000M1_scaffold_437_21
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29242..30228)
DNA (987bp) protein (329aa)
Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174};; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
ornithine carbamoyltransferase (EC:2.1.3.3)
Ornithine carbamoyltransferase n=5 Tax=Clostridiales RepID=A5KPE4_9FIRM
L3_122_000M1_scaffold_437_22
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30335..31120)
DNA (786bp) protein (262aa)
RNA methyltransferase, TrmH family n=5 Tax=Clostridiales RepID=A5KPE3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ27262.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
rRNA methylase, putative, group 3
L3_122_000M1_scaffold_437_23
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31138..31794)
DNA (657bp) protein (219aa)
TrkA N-terminal domain protein n=5 Tax=Clostridiales RepID=A5KPE2_9FIRM
TrkA-N domain-containing protein {ECO:0000313|EMBL:EFV20007.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
K+ transport systems, NAD-binding component
L3_122_000M1_scaffold_437_24
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31942..33390)
DNA (1449bp) protein (483aa)
Potassium uptake protein, TrkH family n=3 Tax=Clostridiales RepID=A5KPE1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ27264.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
Trk-type K+ transport systems, membrane components
L3_122_000M1_scaffold_437_25
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33526..34218)
DNA (693bp) protein (231aa)
Response regulator receiver domain protein n=5 Tax=Clostridiales RepID=A5KPE0_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:EDK23616.1}; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L3_122_000M1_scaffold_437_26
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34211..35266)
DNA (1056bp) protein (352aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
Putative uncharacterized protein n=4 Tax=Lachnospiraceae RepID=E5XF92_9FIRM
His Kinase A (phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./HAMP domain.
L3_122_000M1_scaffold_437_27
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35322..35423)
DNA (102bp) protein (34aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A5KR72_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG83142.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
L3_122_000M1_scaffold_437_28
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35476..36675)
DNA (1200bp) protein (400aa)
S-adenosylmethionine synthase {ECO:0000256|RuleBase:RU000541}; EC=2.5.1.6 {ECO:0000256|RuleBase:RU000541};; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
methionine adenosyltransferase (EC:2.5.1.6)
S-adenosylmethionine synthase n=4 Tax=Clostridiales RepID=E5XF91_9FIRM
L3_122_000M1_scaffold_437_29
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37013..38446)
DNA (1434bp) protein (478aa)
Mate efflux family protein n=4 Tax=Clostridiales RepID=E5XF90_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ27269.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
putative efflux protein, MATE family
L3_122_000M1_scaffold_437_30
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(38462..39439)
DNA (978bp) protein (326aa)
BadF/BadG/BcrA/BcrD ATPase family protein n=2 Tax=Clostridiales RepID=A5KR69_9FIRM
BadF/BadG/BcrA/BcrD ATPase family protein {ECO:0000313|EMBL:CCZ27270.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
BadF/BadG/BcrA/BcrD type ATPase
Displaying items 1-30 of 40 in total

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