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L3_122_000M1_scaffold_450

Search features with annotation key words

Displaying items 1-30 of 61 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_122_000M1_scaffold_450_1
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

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comp(112..2274)
DNA (2163bp) protein (721aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5DF26_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX74491.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
putative transcription accessory protein
L3_122_000M1_scaffold_450_2
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

comp(2332..3816)
DNA (1485bp) protein (495aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D2L7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX74490.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
hypothetical protein
L3_122_000M1_scaffold_450_3
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

4006..4203
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D2T1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX74488.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
L3_122_000M1_scaffold_450_4
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

4329..5261
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5DF23_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX74486.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
hypothetical protein
L3_122_000M1_scaffold_450_5
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

5335..6015
DNA (681bp) protein (227aa)
OmpR family two-component response regulator n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D6P0_9FIRM
OmpR family two-component response regulator {ECO:0000313|EMBL:CCX74484.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
OmpR family two-component response regulator
L3_122_000M1_scaffold_450_6
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

6012..7211
DNA (1200bp) protein (400aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
putative two-component histidine kinase (EC:2.7.13.3)
Putative two-component histidine kinase n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5DCB5_9FIRM
L3_122_000M1_scaffold_450_7
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

7214..8800
DNA (1587bp) protein (529aa)
Amidohydrolase family protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D2K6_9FIRM
Amidohydrolase family protein {ECO:0000313|EMBL:CCX74480.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
D-aminoacylase
L3_122_000M1_scaffold_450_8
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

8806..9570
DNA (765bp) protein (255aa)
Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family (EC:3.1.3.25)
Archaeal fructose-1 6-bisphosphatase and related enzymes of inositol monophosphatase family n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D2R6_9FIRM
Archaeal fructose-1 6-bisphosphatase and related enzymes of inositol monophosphatase family {ECO:0000313|EMBL:CCX74478.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
L3_122_000M1_scaffold_450_9
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

9727..11436
DNA (1710bp) protein (570aa)
Putative metalloendopeptidase n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5DF12_9FIRM
Putative metalloendopeptidase {ECO:0000313|EMBL:CCX74476.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
putative metalloendopeptidase
L3_122_000M1_scaffold_450_10
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

comp(11563..11658)
DNA (96bp) protein (32aa)
Stage V sporulation protein AC n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D2Q8_9FIRM
Stage V sporulation protein AC {ECO:0000313|EMBL:CCX74473.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
stage V sporulation protein AC
L3_122_000M1_scaffold_450_11
Clostridium sp. CAG:1024, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11752..13338)
DNA (1587bp) protein (529aa)
Recombinase n=1 Tax=Clostridium sp. CAG:1024 RepID=R5APP6_9CLOT
Recombinase {ECO:0000313|EMBL:CCX41166.1}; TaxID=1262770 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1024.;"
Site-specific recombinases, DNA invertase Pin homologs
L3_122_000M1_scaffold_450_12
Lachnospiraceae bacterium 10-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13328..15016)
DNA (1689bp) protein (563aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 10-1 RepID=R9MQJ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS73359.1}; TaxID=1235800 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 10-1.;"
Site-specific recombinases, DNA invertase Pin homologs
L3_122_000M1_scaffold_450_13
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15019..16680)
DNA (1662bp) protein (554aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9IXW2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS26698.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
Site-specific recombinases, DNA invertase Pin homologs
L3_122_000M1_scaffold_450_14
Clostridium kluyveri, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16799..17128)
DNA (330bp) protein (110aa)
Uncharacterized protein n=5 Tax=Bacteria RepID=A5N4T5_CLOK5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH05272.1}; TaxID=583346 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium kluyveri (strain NBRC 12016).;"
L3_122_000M1_scaffold_450_15
unknown

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comp(17268..17402)
DNA (135bp) protein (45aa)

This feature has no annotations

L3_122_000M1_scaffold_450_16
unknown

Not on your lists

comp(17399..17779)
DNA (381bp) protein (127aa)

This feature has no annotations

L3_122_000M1_scaffold_450_17
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17837..18931)
DNA (1095bp) protein (365aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6TVU9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC73954.1}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
hypothetical protein
L3_122_000M1_scaffold_450_18
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18960..19775)
DNA (816bp) protein (272aa)
Putative phage head-tail adaptor n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6UTC3_9FIRM
Putative phage head-tail adaptor {ECO:0000313|EMBL:CDC73957.1}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
hypothetical protein
L3_122_000M1_scaffold_450_19
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19842..22052)
DNA (2211bp) protein (737aa)
ATP-dependent RecD-like DNA helicase {ECO:0000256|HAMAP-Rule:MF_01488}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01488};; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
RecD/TraA family helicase (EC:3.1.11.5)
Helicase RecD/TraA family n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6TVV4_9FIRM
L3_122_000M1_scaffold_450_20
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22064..23101)
DNA (1038bp) protein (346aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6U1G9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC73961.1}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
putative phage-type endonuclease
L3_122_000M1_scaffold_450_21
unknown

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comp(23105..23647)
DNA (543bp) protein (181aa)

This feature has no annotations

L3_122_000M1_scaffold_450_22
unknown

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comp(23660..23920)
DNA (261bp) protein (87aa)

This feature has no annotations

L3_122_000M1_scaffold_450_23
unknown

Not on your lists

comp(23923..24177)
DNA (255bp) protein (85aa)

This feature has no annotations

L3_122_000M1_scaffold_450_24
unknown

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comp(24161..24355)
DNA (195bp) protein (65aa)

This feature has no annotations

L3_122_000M1_scaffold_450_25
unknown

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comp(24352..24915)
DNA (564bp) protein (188aa)

This feature has no annotations

L3_122_000M1_scaffold_450_26
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(24896..25684)
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P5Y7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS13144.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
Type I restriction-modification system methyltransferase subunit
L3_122_000M1_scaffold_450_27
Firmicutes bacterium CAG:102, Firmicutes, Bacteria

Not on your lists

comp(25690..26841)
DNA (1152bp) protein (384aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:102 RepID=R5AE07_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX40953.1}; TaxID=1262998 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:102.;"
hypothetical protein
L3_122_000M1_scaffold_450_28
unknown

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comp(27167..27679)
DNA (513bp) protein (171aa)

This feature has no annotations

L3_122_000M1_scaffold_450_29
unknown

Not on your lists

comp(27705..27854)
DNA (150bp) protein (50aa)

This feature has no annotations

L3_122_000M1_scaffold_450_30
BJP_IG2069_Clostridiales_48_15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27851..28081)
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VE20_9CLOT
hypothetical protein
Tax=BJP_IG2069_Clostridiales_48_15
Displaying items 1-30 of 61 in total

View Taxonomy