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L3_122_000M1_scaffold_472

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_122_000M1_scaffold_472_1
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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1..456
DNA (456bp) protein (152aa)
Peptidase U32 family n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IKD0_9FIRM
Peptidase U32 family {ECO:0000313|EMBL:CDB45831.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
peptidase U32
L3_122_000M1_scaffold_472_2
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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466..2826
DNA (2361bp) protein (787aa)
Endonuclease MutS2 {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084206}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084246};; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
Endonuclease MutS2 n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6J693_9FIRM
MutS2 family protein
L3_122_000M1_scaffold_472_3
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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2987..4213
DNA (1227bp) protein (409aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
aspartate kinase (EC:2.7.2.4)
Aspartokinase n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I6K8_9FIRM
L3_122_000M1_scaffold_472_4
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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4259..5506
DNA (1248bp) protein (416aa)
Aminotransferase class I/II n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IGZ5_9FIRM
Aminotransferase class I/II {ECO:0000313|EMBL:CDB45834.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
aminotransferase class I and II
L3_122_000M1_scaffold_472_5
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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5572..7233
DNA (1662bp) protein (554aa)
udk; phosphoribulokinase/uridine kinase (EC:2.7.1.48)
Phosphoribulokinase/uridine kinase family protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I929_9FIRM
Phosphoribulokinase/uridine kinase family protein {ECO:0000313|EMBL:CDB45835.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
L3_122_000M1_scaffold_472_6
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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7610..11848
DNA (4239bp) protein (1413aa)
CoA-substrate-specific enzyme activase n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IKD4_9FIRM
CoA-substrate-specific enzyme activase {ECO:0000313|EMBL:CDB45836.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
CoA-substrate-specific enzyme activase
L3_122_000M1_scaffold_472_7
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(11901..13247)
DNA (1347bp) protein (449aa)
Pyruvate carboxylase subunit B n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6J698_9FIRM
Pyruvate carboxylase subunit B {ECO:0000313|EMBL:CDB45837.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
pyruvate carboxyltransferase
L3_122_000M1_scaffold_472_8
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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13616..14941
DNA (1326bp) protein (442aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I6L4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB45838.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
phosphoadenosine phosphosulfate reductase
L3_122_000M1_scaffold_472_9
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

14938..15489
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IH01_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB45839.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
immunoglobulin-binding regulator B
L3_122_000M1_scaffold_472_10
Fusobacterium ulcerans, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

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comp(15632..16060)
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Fusobacterium ulcerans ATCC 49185 RepID=V9HCV8_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:EFS25467.1}; TaxID=469617 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium ulcerans ATCC 49185.;"
transcriptional regulator
L3_122_000M1_scaffold_472_11
Phascolarctobacterium sp. CAG:266, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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16245..16727
DNA (483bp) protein (161aa)
Cupin n=1 Tax=Phascolarctobacterium sp. CAG:266 RepID=R6HD43_9FIRM
Cupin {ECO:0000313|EMBL:CDB34785.1}; TaxID=1262915 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:266.;"
cupin
L3_122_000M1_scaffold_472_12
Phascolarctobacterium sp. CAG:266, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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16742..17452
DNA (711bp) protein (237aa)
Carboxymuconolactone decarboxylase n=1 Tax=Phascolarctobacterium sp. CAG:266 RepID=R6HNH1_9FIRM
Carboxymuconolactone decarboxylase {ECO:0000313|EMBL:CDB34786.1}; TaxID=1262915 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:266.;"
carboxymuconolactone decarboxylase
L3_122_000M1_scaffold_472_13
Phascolarctobacterium sp. CAG:266, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

17474..18538
DNA (1065bp) protein (355aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium sp. CAG:266 RepID=R6I9R8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB34787.1}; TaxID=1262915 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:266.;"
hypothetical protein
L3_122_000M1_scaffold_472_14
Bacteroides helcogenes, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18600..19430
DNA (831bp) protein (277aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Bacteroides helcogenes (strain ATCC 35417 / DSM 20613 / JCM 6297 / P 36-108) RepID=E6SRP1_BACT6
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ADV45131.1}; TaxID=693979 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides helcogenes (strain ATCC 35417 / DSM 20613 / JCM 6297 / P; 36-108).;"
L3_122_000M1_scaffold_472_15
Fusobacterium ulcerans, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

19441..20523
DNA (1083bp) protein (361aa)
hypothetical protein n=1 Tax=Megamonas rupellensis RepID=UPI0003639CD4
Uncharacterized protein {ECO:0000313|EMBL:EFS25460.1}; TaxID=469617 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium ulcerans ATCC 49185.;"
hypothetical protein
L3_122_000M1_scaffold_472_16
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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20930..21331
DNA (402bp) protein (134aa)
Putative Xre family DNA binding protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IFF1_9FIRM
Putative Xre family DNA binding protein {ECO:0000313|EMBL:CDB45304.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
Predicted transcriptional regulators
L3_122_000M1_scaffold_472_17
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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21370..24726
DNA (3357bp) protein (1119aa)
Autotransporter protease n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I5U7_9FIRM
Autotransporter protease {ECO:0000313|EMBL:CDB45518.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
autotransporter domain protein
L3_122_000M1_scaffold_472_18
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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25105..26292
DNA (1188bp) protein (396aa)
Putative response regulator receiver domain protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I4M3_9FIRM
Putative response regulator receiver domain protein {ECO:0000313|EMBL:CDB45128.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
hypothetical protein
L3_122_000M1_scaffold_472_19
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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26389..27879
DNA (1491bp) protein (497aa)
Putative response regulator receiver domain protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I4M3_9FIRM
Putative response regulator receiver domain protein {ECO:0000313|EMBL:CDB45128.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
hypothetical protein
L3_122_000M1_scaffold_472_20
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(27980..29887)
DNA (1908bp) protein (636aa)
NAD+ synthetase n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6J4A8_9FIRM
NAD+ synthetase {ECO:0000313|EMBL:CDB45127.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
NAD+ synthetase
L3_122_000M1_scaffold_472_21
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

30002..30478
DNA (477bp) protein (159aa)
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase {ECO:0000256|PIRNR:PIRNR006181}; EC=4.2.-.- {ECO:0000256|PIRNR:PIRNR006181};; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IIH0_9FIRM
ybaK/ebsC protein
L3_122_000M1_scaffold_472_22
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

30560..32053
DNA (1494bp) protein (498aa)
threonine synthase (EC:4.2.3.1)
Threonine synthase n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I737_9FIRM
Threonine synthase {ECO:0000313|EMBL:CDB45125.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
L3_122_000M1_scaffold_472_23
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

32247..32594
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IEY1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB45124.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
hypothetical protein
L3_122_000M1_scaffold_472_24
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

32591..34942
DNA (2352bp) protein (784aa)
Single-stranded-DNA-specific exonuclease RecJ n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I4M1_9FIRM
Single-stranded-DNA-specific exonuclease RecJ {ECO:0000313|EMBL:CDB45123.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
single-stranded-DNA-specific exonuclease RecJ
L3_122_000M1_scaffold_472_25
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

34955..37186
DNA (2232bp) protein (744aa)
(p)ppGpp synthetase I SpoT/RelA (EC:2.7.6.5)
GTP diphosphokinase n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6J4A3_9FIRM
GTP diphosphokinase {ECO:0000313|EMBL:CDB45122.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
L3_122_000M1_scaffold_472_26
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

37188..37637
DNA (450bp) protein (150aa)
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160054}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00518};; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IIG5_9FIRM
D-tyrosyl-tRNA(Tyr) deacylase
L3_122_000M1_scaffold_472_27
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

37648..38268
DNA (621bp) protein (207aa)
Beta-lactamase domain-containing protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I734_9FIRM
Beta-lactamase domain-containing protein {ECO:0000313|EMBL:CDB45120.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
beta-lactamase domain-containing protein
L3_122_000M1_scaffold_472_28
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

38281..39366
DNA (1086bp) protein (362aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IEX6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB45119.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
hypothetical protein
L3_122_000M1_scaffold_472_29
Phascolarctobacterium succinatutens, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

39372..40817
DNA (1446bp) protein (482aa)
Coproporphyrinogen dehydrogenase HemZ n=1 Tax=Phascolarctobacterium succinatutens CAG:287 RepID=R6XW24_9FIRM
Coproporphyrinogen dehydrogenase HemZ {ECO:0000313|EMBL:CDD10467.1}; TaxID=1263101 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium succinatutens CAG:287.;"
coproporphyrinogen III oxidase
L3_122_000M1_scaffold_472_30
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


40820..42091
DNA (1272bp) protein (424aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
Histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I4L7_9FIRM
Displaying items 1-30 of 34 in total

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