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L3_122_000M1_scaffold_497

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_122_000M1_scaffold_497_1
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2..109)
DNA (108bp) protein (36aa)
50S ribosomal protein L33 n=1 Tax=Alistipes sp. AP11 RepID=UPI00037F60E5
50S ribosomal protein L33
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
L3_122_000M1_scaffold_497_2
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(129..362)
DNA (234bp) protein (78aa)
50S ribosomal protein L28 n=1 Tax=Alistipes sp. AP11 RepID=UPI0002F827E3
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
LSU ribosomal protein L28P
L3_122_000M1_scaffold_497_3
unknown

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595..1248
DNA (654bp) protein (218aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI00037FE4F1
L3_122_000M1_scaffold_497_4
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1441..2712)
DNA (1272bp) protein (424aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI000315D7D6
CinA-like protein {ECO:0000256|HAMAP-Rule:MF_00226}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
C-terminal domain of CinA type S
L3_122_000M1_scaffold_497_5
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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3003..4172
DNA (1170bp) protein (390aa)
MFS transporter n=1 Tax=Alistipes sp. AP11 RepID=UPI0002E7424B
MFS transport protein AraJ
Protein AraJ {ECO:0000313|EMBL:EEU52535.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L3_122_000M1_scaffold_497_6
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(4285..5364)
DNA (1080bp) protein (360aa)
Dihydroorotate dehydrogenase (quinone) {ECO:0000256|HAMAP-Rule:MF_00225, ECO:0000256|SAAS:SAAS00084821}; EC=1.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00225, ECO:0000256|SAAS:SAAS00084821};; DHOdehase {ECO:0000256|HAMAP-Rule:MF_00225}; Dihydroorotate oxidase {ECO:0000256|HAMAP-Rule:MF_00225}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
Dihydroorotate dehydrogenase (EC:1.3.98.1)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002FCE2B1
L3_122_000M1_scaffold_497_7
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5545..6603)
DNA (1059bp) protein (353aa)
phosphoglycerate dehydrogenase-like oxidoreductase (EC:1.1.1.290)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002E85D70
Uncharacterized protein {ECO:0000313|EMBL:EHB93201.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
L3_122_000M1_scaffold_497_8
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7121..8182
DNA (1062bp) protein (354aa)
Arginase/agmatinase/formimionoglutamate hydrolase, arginase family (EC:3.5.3.11)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002E7D987
Uncharacterized protein {ECO:0000313|EMBL:EHB93202.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
L3_122_000M1_scaffold_497_9
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8354..9709
DNA (1356bp) protein (452aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI00036A7207
Na(+)/H(+) antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; Sodium/proton antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
Na+/H+ antiporter NhaA type
L3_122_000M1_scaffold_497_10
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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9850..10539
DNA (690bp) protein (230aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI00036D5249
peptidylprolyl isomerase
L3_122_000M1_scaffold_497_11
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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11265..12578
DNA (1314bp) protein (438aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002FC8A8A
Uncharacterized protein {ECO:0000313|EMBL:EDS04183.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
hypothetical protein
L3_122_000M1_scaffold_497_12
Barnesiella viscericola, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12593..14863
DNA (2271bp) protein (757aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI00037959C5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF12245.1}; TaxID=880074 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella viscericola DSM 18177.;"
L3_122_000M1_scaffold_497_13
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15040..15336)
DNA (297bp) protein (99aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002DF8FBA
Uncharacterized protein {ECO:0000313|EMBL:EHB93205.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
L3_122_000M1_scaffold_497_14
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15333..16436)
DNA (1104bp) protein (368aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI00030D4259
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
recF protein
L3_122_000M1_scaffold_497_15
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16694..17395
DNA (702bp) protein (234aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002EB8112
Uncharacterized protein {ECO:0000313|EMBL:EHB93207.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
TPR domain protein
L3_122_000M1_scaffold_497_16
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17462..17998
DNA (537bp) protein (179aa)
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795}; Short=DMRL synthase {ECO:0000256|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000256|HAMAP-Rule:MF_00178};; Short=Lumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178};; EC=2.5.1.78 {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795};; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
6,7-dimethyl-8-ribityllumazine synthase (EC:2.5.1.78)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0003067BBC
L3_122_000M1_scaffold_497_17
Lentisphaera araneosa, Lentisphaera, Lentisphaerales, Lentisphaeria, Lentisphaerae, Bacteria

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18390..20423
DNA (2034bp) protein (678aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0003602F99
Uncharacterized protein {ECO:0000313|EMBL:EDM26944.1}; TaxID=313628 species="Bacteria; Lentisphaerae; Lentisphaeria; Lentisphaerales; Lentisphaeraceae; Lentisphaera.;" source="Lentisphaera araneosa HTCC2155.;"
hypothetical protein
L3_122_000M1_scaffold_497_18
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(21001..21363)
DNA (363bp) protein (121aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI00030CF8D2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CEA17035.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
L3_122_000M1_scaffold_497_19
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21519..22031)
DNA (513bp) protein (171aa)
ferritin n=1 Tax=Alistipes sp. AP11 RepID=UPI00031ECC52
Uncharacterized protein {ECO:0000313|EMBL:EHB91581.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
ferritin Dps family protein
L3_122_000M1_scaffold_497_20
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22296..23384)
DNA (1089bp) protein (363aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002D86523
Uncharacterized protein {ECO:0000313|EMBL:EHB91579.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
de-hypoxanthine futalosine cyclase
L3_122_000M1_scaffold_497_21
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23459..23629)
DNA (171bp) protein (57aa)
4Fe-4S ferredoxin n=1 Tax=Alistipes sp. AP11 RepID=UPI0002DE7CB6
Uncharacterized protein {ECO:0000313|EMBL:EHB91578.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
Ferredoxin
L3_122_000M1_scaffold_497_22
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(23888..25288)
DNA (1401bp) protein (467aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
(dimethylallyl)adenosine tRNA methylthiotransferase n=1 Tax=Alistipes sp. AP11 RepID=UPI0002F9F0D6
tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB
L3_122_000M1_scaffold_497_23
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25299..26219)
DNA (921bp) protein (307aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0003091024
Uncharacterized protein {ECO:0000313|EMBL:EHB91373.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
hypothetical protein
L3_122_000M1_scaffold_497_24
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26327..26953
DNA (627bp) protein (209aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002E0E9CF
Glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-PO4 G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-phosphate--glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Lysophosphatidic acid synthase {ECO:0000256|HAMAP-Rule:MF_01043}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY
L3_122_000M1_scaffold_497_25
Bacteroides massiliensis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27226..28296)
DNA (1071bp) protein (357aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI000374526A
Uncharacterized protein {ECO:0000313|EMBL:EOA55489.1}; TaxID=1121098 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides massiliensis B84634 = Timone 84634 = DSM 17679 = JCM; 13223.;"
choloylglycine hydrolase
L3_122_000M1_scaffold_497_26
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28612..29883)
DNA (1272bp) protein (424aa)
seryl-tRNA synthetase (EC:6.1.1.11)
seryl-tRNA synthetase n=1 Tax=Alistipes sp. AP11 RepID=UPI0002FA9152
Seryl-tRNA synthetase {ECO:0000313|EMBL:EHB92267.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
L3_122_000M1_scaffold_497_27
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30075..31166
DNA (1092bp) protein (364aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002DAD664
Uncharacterized protein {ECO:0000313|EMBL:EHB92268.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
Glutamine cyclotransferase
L3_122_000M1_scaffold_497_28
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31227..34889
DNA (3663bp) protein (1221aa)
methionine synthase (B12-dependent) (EC:2.1.1.13)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002EC085A
Methionine synthase (B12-dependent) {ECO:0000313|EMBL:CDD24337.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
L3_122_000M1_scaffold_497_29
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34904..35866
DNA (963bp) protein (321aa)
5,10-methylenetetrahydrofolate reductase (EC:1.5.1.20)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002D8FC27
L3_122_000M1_scaffold_497_30
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36461..37642
DNA (1182bp) protein (394aa)
ammA; N-acyl-L-amino acid amidohydrolase (EC:3.5.1.14)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI00030F9563
Uncharacterized protein {ECO:0000313|EMBL:EHB92270.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
Displaying items 1-30 of 39 in total

View Taxonomy