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L3_122_000M1_scaffold_505

Search features with annotation key words

Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_122_000M1_scaffold_505_1
Paraprevotella clara, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

824..1453
DNA (630bp) protein (210aa)
ABC transporter, ATP-binding protein n=2 Tax=Bacteroidetes RepID=F3XY55_9FLAO
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EHG99045.1}; TaxID=762968 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella clara YIT 11840.;"
ABC-type antimicrobial peptide transport system, ATPase component
L3_122_000M1_scaffold_505_2
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1464..2264
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Paraprevotella clara CAG:116 RepID=R5NFH3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCZ02890.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
ABC transporter permease
L3_122_000M1_scaffold_505_3
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2288..3145
DNA (858bp) protein (286aa)
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
Putative GTP cyclohydrolase 1 type 2 n=1 Tax=Paraprevotella clara CAG:116 RepID=R5NZN4_9BACT
YbgI/family dinuclear metal center protein
L3_122_000M1_scaffold_505_4
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3154..3981
DNA (828bp) protein (276aa)
Zinc ribbon domain protein n=3 Tax=Bacteroidetes RepID=F3XY52_9FLAO
Zinc ribbon domain protein {ECO:0000313|EMBL:CCZ02892.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
hypothetical protein
L3_122_000M1_scaffold_505_5
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4091..4411)
DNA (321bp) protein (107aa)
Multidrug resistance protein, SMR family n=3 Tax=Bacteroidetes RepID=F3XY51_9FLAO
Multidrug resistance protein SMR family {ECO:0000313|EMBL:CCZ02893.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
Membrane transporters of cations and cationic drugs
L3_122_000M1_scaffold_505_6
Paraprevotella clara, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4560..5123
DNA (564bp) protein (188aa)
Uncharacterized protein n=2 Tax=Bacteroidetes RepID=F3XY50_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EHG99050.1}; TaxID=762968 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella clara YIT 11840.;"
cAMP-binding proteins-catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
L3_122_000M1_scaffold_505_7
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5834..6517
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Paraprevotella clara CAG:116 RepID=R5NFH8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCZ02895.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
hypothetical protein
L3_122_000M1_scaffold_505_8
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6542..6796
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Paraprevotella clara CAG:116 RepID=R5NZN9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCZ02896.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
hypothetical protein
L3_122_000M1_scaffold_505_9
Paraprevotella clara, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6915..7367)
DNA (453bp) protein (151aa)
Uncharacterized protein n=2 Tax=Bacteroidetes RepID=F3XY46_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EHG99053.1}; TaxID=762968 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella clara YIT 11840.;"
hypothetical protein
L3_122_000M1_scaffold_505_10
Paraprevotella clara, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7438..8214
DNA (777bp) protein (259aa)
Putative AMP nucleosidase n=3 Tax=Bacteroidetes RepID=F3XY45_9FLAO
Putative AMP nucleosidase {ECO:0000313|EMBL:EHG99054.1}; TaxID=762968 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella clara YIT 11840.;"
AMP nucleosidase
L3_122_000M1_scaffold_505_11
Paraprevotella clara, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8233..9258
DNA (1026bp) protein (342aa)
DNA polymerase III, delta subunit (EC:2.7.7.7)
DNA polymerase III, delta subunit n=2 Tax=Bacteroidetes RepID=F3XY44_9FLAO
DNA polymerase III, delta subunit {ECO:0000313|EMBL:EHG99055.1}; TaxID=762968 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella clara YIT 11840.;"
L3_122_000M1_scaffold_505_12
Paraprevotella clara, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10023..10520
DNA (498bp) protein (166aa)
DNA-binding helix-turn-helix protein n=2 Tax=Bacteroidetes RepID=F3XY43_9FLAO
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EHG99056.1}; TaxID=762968 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella clara YIT 11840.;"
DNA-binding protein
L3_122_000M1_scaffold_505_13
Paraprevotella clara, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10862..11638
DNA (777bp) protein (259aa)
Putative dihydroorotate oxidase, electron transfer subunit n=1 Tax=Paraprevotella clara YIT 11840 RepID=G5SUZ1_9BACT
Putative dihydroorotate oxidase, electron transfer subunit {ECO:0000313|EMBL:EHG99058.1}; TaxID=762968 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella clara YIT 11840.;"
oxidoreductase FAD/NAD(P)-binding domain-containing protein
L3_122_000M1_scaffold_505_14
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11677..12537
DNA (861bp) protein (287aa)
Dihydroorotate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00224}; Short=DHOD {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHODase {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHOdehase {ECO:0000256|HAMAP-Rule:MF_00224};; EC=1.3.-.- {ECO:0000256|HAMAP-Rule:MF_00224};; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
dihydroorotate dehydrogenase (EC:1.3.98.1)
Dihydroorotate dehydrogenase n=3 Tax=Bacteroidetes RepID=F3XSU9_9FLAO
L3_122_000M1_scaffold_505_15
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12633..13205
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Paraprevotella clara CAG:116 RepID=R5NLB9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCZ02904.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
L3_122_000M1_scaffold_505_16
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13321..13695)
DNA (375bp) protein (125aa)
Thioesterase family protein n=3 Tax=Bacteroidetes RepID=F3XSV1_9FLAO
Thioesterase family protein {ECO:0000313|EMBL:CCZ02905.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
thioesterase family protein
L3_122_000M1_scaffold_505_17
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13899..14081)
DNA (183bp) protein (61aa)
Preprotein translocase subunit SecG domain protein n=3 Tax=Paraprevotella RepID=F3QUN8_9BACT
Preprotein translocase subunit SecG domain protein {ECO:0000313|EMBL:CCZ02907.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
L3_122_000M1_scaffold_505_18
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14366..15562)
DNA (1197bp) protein (399aa)
Transporter major facilitator family protein n=3 Tax=Bacteroidetes RepID=R5NFJ4_9BACT
Transporter major facilitator family protein {ECO:0000313|EMBL:CCZ02910.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
major facilitator superfamily MFS_1
L3_122_000M1_scaffold_505_19
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(15569..16588)
DNA (1020bp) protein (340aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
Phenylalanine--tRNA ligase alpha subunit n=3 Tax=Bacteroidetes RepID=F3XSV5_9FLAO
pheS; putative phenylalanyl-tRNA synthetase alpha chain
L3_122_000M1_scaffold_505_20
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16719..17564
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Paraprevotella clara CAG:116 RepID=R5P1A4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCZ02912.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
hypothetical protein
L3_122_000M1_scaffold_505_21
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17573..18613
DNA (1041bp) protein (347aa)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-acetylmuramate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00037}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
murB; UDP-N-acetylmuramate dehydrogenase (EC:1.1.1.158)
UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Paraprevotella clara CAG:116 RepID=R5NGM5_9BACT
L3_122_000M1_scaffold_505_22
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18604..19377
DNA (774bp) protein (258aa)
Metallo-beta-lactamase domain protein n=1 Tax=Paraprevotella clara CAG:116 RepID=R5NLD0_9BACT
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:CCZ02914.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
metallo-beta-lactamase domain-containing protein
L3_122_000M1_scaffold_505_23
Paraprevotella clara, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19448..19846)
DNA (399bp) protein (133aa)
Uncharacterized protein n=2 Tax=Bacteroidetes RepID=F3XSV9_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EHG99069.1}; TaxID=762968 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella clara YIT 11840.;"
L3_122_000M1_scaffold_505_24
Paraprevotella clara, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19983..21338)
DNA (1356bp) protein (452aa)
MATE efflux family protein n=2 Tax=Bacteroidetes RepID=F3XSW2_9FLAO
MATE efflux family protein {ECO:0000313|EMBL:EHG99072.1}; TaxID=762968 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella clara YIT 11840.;"
MATE efflux family protein
L3_122_000M1_scaffold_505_25
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21408..22589)
DNA (1182bp) protein (394aa)
Glycosyltransferase group 2 family protein n=1 Tax=Paraprevotella clara CAG:116 RepID=R5P1A8_9BACT
Glycosyltransferase group 2 family protein {ECO:0000313|EMBL:CCZ02917.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
Glycosyltransferases, probably involved in cell wall biogenesis
L3_122_000M1_scaffold_505_26
Paraprevotella clara, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22589..23749)
DNA (1161bp) protein (387aa)
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120};; EC=4.1.1.20 {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738};; TaxID=762968 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella clara YIT 11840.;"
Diaminopimelate decarboxylase n=3 Tax=Bacteroidetes RepID=F3XSW4_9FLAO
diaminopimelate decarboxylase
L3_122_000M1_scaffold_505_27
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23759..25078)
DNA (1320bp) protein (440aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
aspartate kinase (EC:2.7.2.4)
Aspartokinase n=1 Tax=Paraprevotella clara CAG:116 RepID=R5NLD6_9BACT
L3_122_000M1_scaffold_505_28
Paraprevotella clara, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25094..25831)
DNA (738bp) protein (246aa)
Putative cell division ATP-binding protein FtsE n=2 Tax=Bacteroidetes RepID=F3XSW6_9FLAO
Putative cell division ATP-binding protein FtsE {ECO:0000313|EMBL:EHG99076.1}; TaxID=762968 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella clara YIT 11840.;"
ATP-binding protein involved in cell division
L3_122_000M1_scaffold_505_29
Paraprevotella clara, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25851..26465)
DNA (615bp) protein (205aa)
phosphoribosyl-ATP pyrophosphatase/phosphoribosyl-AMP cyclohydrolase (EC:3.5.4.19 3.6.1.31)
Histidine biosynthesis bifunctional protein HisIE n=2 Tax=Bacteroidetes RepID=F3XSW7_9FLAO
Histidine biosynthesis bifunctional protein HisIE {ECO:0000256|HAMAP-Rule:MF_01019, ECO:0000256|SAAS:SAAS00015509}; TaxID=762968 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella clara YIT 11840.;"
L3_122_000M1_scaffold_505_30
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26495..27253)
DNA (759bp) protein (253aa)
Imidazole glycerol phosphate synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; EC=4.1.3.- {ECO:0000256|HAMAP-Rule:MF_01013};; IGP synthase cyclase subunit {ECO:0000256|HAMAP-Rule:MF_01013}; IGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; ImGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
Imidazole glycerol phosphate synthase subunit HisF n=1 Tax=Paraprevotella clara CAG:116 RepID=R5P1D8_9BACT
hisF; imidazoleglycerol phosphate synthase, cyclase subunit
Displaying items 1-30 of 52 in total

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