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L3_122_000M1_scaffold_507

Search features with annotation key words

Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_122_000M1_scaffold_507_1
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..832
DNA (831bp) protein (277aa)
arginyl-tRNA synthetase (EC:6.1.1.19)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123, ECO:0000313|EMBL:CBL11842.1};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
Arginine--tRNA ligase n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KWV2_9FIRM
L3_122_000M1_scaffold_507_2
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

918..1604
DNA (687bp) protein (229aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KWV3_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL11843.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L3_122_000M1_scaffold_507_3
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1785..3224
DNA (1440bp) protein (480aa)
Carbon starvation protein, predicted membrane protein n=2 Tax=Roseburia RepID=D4KRL1_9FIRM
Carbon starvation protein, predicted membrane protein
Carbon starvation protein, predicted membrane protein {ECO:0000313|EMBL:CBL09513.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_122_000M1_scaffold_507_4
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3283..4290
DNA (1008bp) protein (336aa)
Uncharacterized protein n=3 Tax=Roseburia RepID=C7GC81_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL09512.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_122_000M1_scaffold_507_5
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4414..5370
DNA (957bp) protein (319aa)
Stage III sporulation protein AA n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KRK9_9FIRM
Stage III sporulation protein AA {ECO:0000313|EMBL:CDA55139.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
stage III sporulation protein AA
L3_122_000M1_scaffold_507_6
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5364..5882
DNA (519bp) protein (173aa)
Stage III sporulation protein AB (Spore_III_AB) n=3 Tax=Roseburia intestinalis RepID=D4KWV7_9FIRM
Stage III sporulation protein AB (spore_III_AB).
Stage III sporulation protein AB (Spore_III_AB) {ECO:0000313|EMBL:CBL11847.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L3_122_000M1_scaffold_507_7
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5934..6128
DNA (195bp) protein (65aa)
Stage III sporulation protein AC n=4 Tax=Roseburia RepID=D4KRK6_9FIRM
stage III sporulation protein AC
Stage III sporulation protein AC {ECO:0000313|EMBL:EEV00572.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L3_122_000M1_scaffold_507_8
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6158..6541
DNA (384bp) protein (128aa)
Stage III sporulation protein AC/AD protein family n=3 Tax=Roseburia intestinalis RepID=D4KWV9_9FIRM
Stage III sporulation protein AC/AD protein family.
Putative stage III sporulation protein AD {ECO:0000313|EMBL:EEV00573.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L3_122_000M1_scaffold_507_9
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6538..7689
DNA (1152bp) protein (384aa)
Stage III sporulation protein AE (Spore_III_AE) n=3 Tax=Roseburia intestinalis RepID=D4KRK4_9FIRM
Stage III sporulation protein AE (spore_III_AE).
Stage III sporulation protein AE (Spore_III_AE) {ECO:0000313|EMBL:CBL09506.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_122_000M1_scaffold_507_10
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7705..8274
DNA (570bp) protein (190aa)
Stage III sporulation protein AF (Spore_III_AF) n=2 Tax=Roseburia intestinalis RepID=D4KRK3_9FIRM
Stage III sporulation protein AF (Spore_III_AF).
Stage III sporulation protein AF (Spore_III_AF) {ECO:0000313|EMBL:CBL09505.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_122_000M1_scaffold_507_11
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8271..8876
DNA (606bp) protein (202aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KWW2_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL11852.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L3_122_000M1_scaffold_507_12
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8873..9697
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GC89_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEV00577.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
hypothetical protein
L3_122_000M1_scaffold_507_13
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9817..10974
DNA (1158bp) protein (386aa)
phosphopentomutase (EC:5.4.2.7)
Phosphopentomutase {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00010015}; EC=5.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00009998};; Phosphodeoxyribomutase {ECO:0000256|HAMAP-Rule:MF_00740}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
Phosphopentomutase n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KWW3_9FIRM
L3_122_000M1_scaffold_507_14
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10999..12588
DNA (1590bp) protein (530aa)
Peptide chain release factor 3 n=2 Tax=Roseburia RepID=R6B7W3_9FIRM
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
peptide chain release factor 3
L3_122_000M1_scaffold_507_15
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12673..12999
DNA (327bp) protein (109aa)
Thioredoxin n=3 Tax=Roseburia RepID=D4KRJ7_9FIRM
thioredoxin
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077, ECO:0000313|EMBL:CBL11854.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L3_122_000M1_scaffold_507_16
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13146..13517)
DNA (372bp) protein (124aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KWW5_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL11855.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L3_122_000M1_scaffold_507_17
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


14051..15214
DNA (1164bp) protein (388aa)
Protein RecA n=4 Tax=Roseburia RepID=D4KRJ4_9FIRM
protein RecA
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L3_122_000M1_scaffold_507_18
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15218..15841
DNA (624bp) protein (208aa)
Regulatory protein RecX n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KWW8_9FIRM
hypothetical protein
Regulatory protein RecX {ECO:0000256|HAMAP-Rule:MF_01114, ECO:0000256|SAAS:SAAS00093789}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L3_122_000M1_scaffold_507_19
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16043..17590
DNA (1548bp) protein (516aa)
Ribonuclease Y {ECO:0000256|HAMAP-Rule:MF_00335}; Short=RNase Y {ECO:0000256|HAMAP-Rule:MF_00335};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00335};; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
Ribonuclease Y n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6B7V8_9FIRM
metal dependent phosphohydrolase
L3_122_000M1_scaffold_507_20
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17799..18314
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GCA2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEV00549.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
hypothetical protein
L3_122_000M1_scaffold_507_21
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18344..19147
DNA (804bp) protein (268aa)
Response regulator receiver domain protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GCA3_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:EEV00550.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
hypothetical protein
L3_122_000M1_scaffold_507_22
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19682..20236
DNA (555bp) protein (185aa)
NTP pyrophosphohydrolases including oxidative damage repair enzymes (EC:3.6.1.13)
NTP pyrophosphohydrolases including oxidative damage repair enzymes n=3 Tax=Roseburia intestinalis RepID=D4KWX2_9FIRM
Hydrolase, NUDIX family {ECO:0000313|EMBL:EEV00553.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L3_122_000M1_scaffold_507_23
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20550..20828
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6B7V3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA55116.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L3_122_000M1_scaffold_507_24
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20903..21787
DNA (885bp) protein (295aa)
Tyrosine recombinase XerC n=4 Tax=Roseburia RepID=D4KRI8_9FIRM
tyrosine recombinase XerD subunit
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L3_122_000M1_scaffold_507_25
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21918..22949)
DNA (1032bp) protein (344aa)
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (EC:2.5.1.54)
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; EC=2.5.1.54 {ECO:0000256|PIRNR:PIRNR001361, ECO:0000313|EMBL:CBL09489.1};; 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase {ECO:0000256|PIRNR:PIRNR001361}; DAHP synthase {ECO:0000256|PIRNR:PIRNR001361}; Phospho-2-keto-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
Phospho-2-dehydro-3-deoxyheptonate aldolase n=4 Tax=Roseburia RepID=D4KRI7_9FIRM
L3_122_000M1_scaffold_507_26
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23151..23903
DNA (753bp) protein (251aa)
3-dehydroquinate dehydratase, type I (EC:4.2.1.10)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00214}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00214};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00214};; Type I DHQase {ECO:0000256|HAMAP-Rule:MF_00214}; Type I dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00214}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
3-dehydroquinate dehydratase n=4 Tax=Roseburia RepID=D4KRI5_9FIRM
L3_122_000M1_scaffold_507_27
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24046..24504
DNA (459bp) protein (153aa)
Transcriptional regulators n=4 Tax=Roseburia RepID=D4KRI4_9FIRM
Transcriptional regulators
Transcriptional regulators {ECO:0000313|EMBL:CDA55112.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L3_122_000M1_scaffold_507_28
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24508..26829
DNA (2322bp) protein (774aa)
ABC-type multidrug transport system, ATPase and permease components n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KRI3_9FIRM
ABC-type multidrug transport system, ATPase and permease components
ABC-type multidrug transport system, ATPase and permease components {ECO:0000313|EMBL:CBL09485.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_122_000M1_scaffold_507_29
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26822..28675
DNA (1854bp) protein (618aa)
ABC-type multidrug transport system, ATPase and permease components n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KRI2_9FIRM
ABC-type multidrug transport system, ATPase and permease components {ECO:0000313|EMBL:CBL09484.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
ABC-type multidrug transport system, ATPase and permease components
L3_122_000M1_scaffold_507_30
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28851..29816
DNA (966bp) protein (322aa)
L-lactate dehydrogenase (EC:1.1.1.27)
L-lactate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00488, ECO:0000313|EMBL:CBL11869.1}; Short=L-LDH {ECO:0000256|HAMAP-Rule:MF_00488};; EC=1.1.1.27 {ECO:0000256|HAMAP-Rule:MF_00488, ECO:0000313|EMBL:CBL11869.1};; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L-lactate dehydrogenase n=2 Tax=Roseburia intestinalis RepID=D4KWX9_9FIRM
Displaying items 1-30 of 48 in total

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