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L3_122_000M1_scaffold_530

Search features with annotation key words

Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_122_000M1_scaffold_530_1
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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1..474
DNA (474bp) protein (158aa)
Methionine import ATP-binding protein MetN {ECO:0000256|HAMAP-Rule:MF_01719}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01719};; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
Putative D-methionine ABC transporter ATP-binding protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IJB9_9FIRM
ABC transporter
L3_122_000M1_scaffold_530_2
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

464..1123
DNA (660bp) protein (220aa)
D-methionine transport system permease protein MetI n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I7Z1_9FIRM
D-methionine transport system permease protein MetI {ECO:0000313|EMBL:CDB45460.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
metI; binding-protein-dependent transport system inner membrane protein
L3_122_000M1_scaffold_530_3
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

1150..1983
DNA (834bp) protein (278aa)
Lipoprotein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IFY0_9FIRM
Lipoprotein {ECO:0000256|PIRNR:PIRNR002854}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
D-methionine-binding lipoprotein metQ
L3_122_000M1_scaffold_530_4
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(2063..2959)
DNA (897bp) protein (299aa)
LysR substrate-binding protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I5K0_9FIRM
LysR substrate-binding protein {ECO:0000313|EMBL:CDB45458.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
transcriptional regulator, LysR family
L3_122_000M1_scaffold_530_5
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

3105..3542
DNA (438bp) protein (146aa)
UspA domain protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6J573_9FIRM
UspA domain protein {ECO:0000313|EMBL:CDB45457.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
UspA domain-containing protein
L3_122_000M1_scaffold_530_6
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(3650..4867)
DNA (1218bp) protein (406aa)
Drug resistance transporter Bcr/CflA family protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IJB1_9FIRM
Drug resistance transporter Bcr/CflA family protein {ECO:0000313|EMBL:CDB45456.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
drug resistance transporter, Bcr/CflA subfamily
L3_122_000M1_scaffold_530_7
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(5033..5401)
DNA (369bp) protein (123aa)
Methylated-DNA--[protein]-cysteine S-methyltransferase n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I7Y7_9FIRM
Methylated-DNA--[protein]-cysteine S-methyltransferase {ECO:0000313|EMBL:CDB45455.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
O-6-methylguanine DNA methyltransferase
L3_122_000M1_scaffold_530_8
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(5428..5973)
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IFX4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB45454.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
hypothetical protein
L3_122_000M1_scaffold_530_9
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5986..7446)
DNA (1461bp) protein (487aa)
Transcriptional regulator, AraC family n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MFS4_ALKOO
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ABW17713.1}; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus oremlandii (strain OhILAs) (Clostridium oremlandii; (strain OhILAs)).;"
L3_122_000M1_scaffold_530_10
unknown

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7721..8269
DNA (549bp) protein (183aa)

This feature has no annotations

L3_122_000M1_scaffold_530_11
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(8637..11348)
DNA (2712bp) protein (904aa)
Autotransporter n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6J567_9FIRM
Autotransporter {ECO:0000313|EMBL:CDB45452.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
autotransporter
L3_122_000M1_scaffold_530_12
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(11780..12187)
DNA (408bp) protein (136aa)
Rrf2 family protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IJA4_9FIRM
Rrf2 family protein {ECO:0000313|EMBL:CDB45451.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
rrf2 family protein (putative transcriptional regulator)
L3_122_000M1_scaffold_530_13
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(12364..12717)
DNA (354bp) protein (118aa)
Hpt domain n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I7Y0_9FIRM
Hpt domain {ECO:0000313|EMBL:CDB45450.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
Hpt domain.
L3_122_000M1_scaffold_530_14
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(12806..13180)
DNA (375bp) protein (125aa)
DNA-binding helix-turn-helix protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IFW8_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:CDB45449.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
Transcriptional regulator, HTH-type
L3_122_000M1_scaffold_530_15
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(13398..14675)
DNA (1278bp) protein (426aa)
Transcriptional regulator n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I5I6_9FIRM
Transcriptional regulator {ECO:0000313|EMBL:CDB45448.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
hypothetical protein
L3_122_000M1_scaffold_530_16
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(14769..15656)
DNA (888bp) protein (296aa)
Putative membrane protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6J560_9FIRM
Putative membrane protein {ECO:0000313|EMBL:CDB45447.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
drug-metabolite exporter
L3_122_000M1_scaffold_530_17
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(15766..17502)
DNA (1737bp) protein (579aa)
putative monovalent cation/H+ antiporter subunit D (EC:1.6.99.5)
Putative monovalent cation/H+ antiporter subunit D n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IJ97_9FIRM
Putative monovalent cation/H+ antiporter subunit D {ECO:0000313|EMBL:CDB45446.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
L3_122_000M1_scaffold_530_18
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(17489..17734)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I7X5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB45445.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
hypothetical protein
L3_122_000M1_scaffold_530_19
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(17734..19239)
DNA (1506bp) protein (502aa)
NADH-ubiquinone/plastoquinone family protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IFW1_9FIRM
NADH-ubiquinone/plastoquinone family protein {ECO:0000313|EMBL:CDB45444.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
hypothetical protein
L3_122_000M1_scaffold_530_20
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(19236..20726)
DNA (1491bp) protein (497aa)
Proton-translocating NADH-quinone oxidoreductase chain n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I5I0_9FIRM
Proton-translocating NADH-quinone oxidoreductase chain {ECO:0000313|EMBL:CDB45443.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
HyfB; formate hydrogenlyase subunit 3
L3_122_000M1_scaffold_530_21
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(20723..21097)
DNA (375bp) protein (125aa)
NADH-ubiquinone/plastoquinone oxidoreductase chain 4L n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6J554_9FIRM
NADH-ubiquinone/plastoquinone oxidoreductase chain 4L {ECO:0000313|EMBL:CDB45442.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
MnhC; multisubunit Na+/H+ antiporter
L3_122_000M1_scaffold_530_22
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(21081..21530)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IJ91_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB45441.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
Na+/H+ antiporter MnhB subunit-like protein
L3_122_000M1_scaffold_530_23
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(21527..21832)
DNA (306bp) protein (102aa)
Monovalent cation/H+ antiporter subunit B family protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I7W9_9FIRM
Monovalent cation/H+ antiporter subunit B family protein {ECO:0000313|EMBL:CDB45440.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
MnhB; MnhB protein
L3_122_000M1_scaffold_530_24
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(21832..22074)
DNA (243bp) protein (81aa)
Monovalent cation/H+ antiporter subunit B domain protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IFV6_9FIRM
Monovalent cation/H+ antiporter subunit B domain protein {ECO:0000313|EMBL:CDB45439.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
MnhB; MnhB protein
L3_122_000M1_scaffold_530_25
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(22055..22411)
DNA (357bp) protein (119aa)
Monovalent cation/proton antiporter MnhG/PhaG subunit n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I5H4_9FIRM
Monovalent cation/proton antiporter MnhG/PhaG subunit {ECO:0000313|EMBL:CDB45438.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
monovalent cation/proton antiporter, MnhG/PhaG subunit
L3_122_000M1_scaffold_530_26
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(22408..22671)
DNA (264bp) protein (88aa)
Multiple resistance and pH regulation protein F n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6J549_9FIRM
Multiple resistance and pH regulation protein F {ECO:0000313|EMBL:CDB45437.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
MnhF; multisubunit Na+/H+ antiporter, MnhF subunit
L3_122_000M1_scaffold_530_27
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(22675..23247)
DNA (573bp) protein (191aa)
Na+/H+ ion antiporter subunit n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IJ86_9FIRM
Na+/H+ ion antiporter subunit {ECO:0000313|EMBL:CDB45436.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
MnhE; multisubunit Na+/H+ antiporter
L3_122_000M1_scaffold_530_28
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(23632..24426)
DNA (795bp) protein (265aa)
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166};; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
glutamate racemase (EC:5.1.1.3)
Glutamate racemase n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I7W4_9FIRM
L3_122_000M1_scaffold_530_29
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

24592..25116
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IFV0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB45434.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
L3_122_000M1_scaffold_530_30
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(25161..25916)
DNA (756bp) protein (252aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I5G8_9FIRM
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:CDB45433.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
short-chain dehydrogenase/reductase SDR
Displaying items 1-30 of 48 in total

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