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L3_122_000M1_scaffold_542

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Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_122_000M1_scaffold_542_1
Megamonas hypermegale, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(128..862)
DNA (735bp) protein (245aa)
purine-nucleoside phosphorylase (EC:2.4.2.1)
Purine nucleoside phosphorylase DeoD-type {ECO:0000256|HAMAP-Rule:MF_01627}; Short=PNP {ECO:0000256|HAMAP-Rule:MF_01627};; EC=2.4.2.1 {ECO:0000256|HAMAP-Rule:MF_01627, ECO:0000313|EMBL:CBL07328.1};; TaxID=657316 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas hypermegale ART12/1.;"
Purine nucleoside phosphorylase DeoD-type n=2 Tax=Megamonas RepID=D4KG31_9FIRM
L3_122_000M1_scaffold_542_2
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(948..2252)
DNA (1305bp) protein (435aa)
Phosphomethylpyrimidine synthase {ECO:0000256|HAMAP-Rule:MF_00089}; EC=4.1.99.17 {ECO:0000256|HAMAP-Rule:MF_00089};; Hydroxymethylpyrimidine phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00089}; Thiamine biosynthesis protein ThiC {ECO:0000256|HAMAP-Rule:MF_00089}; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
phosphomethylpyrimidine synthase n=1 Tax=Megamonas rupellensis RepID=UPI000366A765
hydroxymethylpyrimidine synthase
L3_122_000M1_scaffold_542_3
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(2693..3700)
DNA (1008bp) protein (336aa)
Putative uncharacterized protein n=1 Tax=Megamonas funiformis YIT 11815 RepID=H3KAU6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHR32516.1}; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
hypothetical protein
L3_122_000M1_scaffold_542_4
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(3812..5452)
DNA (1641bp) protein (547aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
PAS/PAC sensor signal transduction histidine kinase (EC:2.7.3.-)
hypothetical protein n=1 Tax=Megamonas rupellensis RepID=UPI00037A1113
L3_122_000M1_scaffold_542_5
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(5502..6197)
DNA (696bp) protein (232aa)
Putative uncharacterized protein n=1 Tax=Megamonas funiformis YIT 11815 RepID=H3KAU4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHR32514.1}; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L3_122_000M1_scaffold_542_6
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

6749..7075
DNA (327bp) protein (109aa)
Putative uncharacterized protein n=1 Tax=Megamonas funiformis YIT 11815 RepID=H3KAU3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHR32513.1}; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
hypothetical protein
L3_122_000M1_scaffold_542_7
Megamonas funiformis CAG:377, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

7290..9362
DNA (2073bp) protein (691aa)
hypothetical protein n=1 Tax=Megamonas rupellensis RepID=UPI0003778FD1
Uncharacterized protein {ECO:0000313|EMBL:CDB94504.1}; TaxID=1263086 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas; environmental samples.;" source="Megamonas funiformis CAG:377.;"
Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type)
L3_122_000M1_scaffold_542_8
Megamonas funiformis CAG:377, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

9365..11260
DNA (1896bp) protein (632aa)
mtlA; putative PTS system mannitol-specific EIICBA component (EC:2.7.1.69)
PTS system, mannitol-specific IIC component n=2 Tax=Megamonas RepID=H3KAU1_9FIRM
PTS system mannitol-specific IIC component {ECO:0000313|EMBL:CDB94506.1}; TaxID=1263086 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas; environmental samples.;" source="Megamonas funiformis CAG:377.;"
L3_122_000M1_scaffold_542_9
Megamonas funiformis CAG:377, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

11287..12438
DNA (1152bp) protein (384aa)
Mannitol-1-phosphate 5-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00196, ECO:0000256|SAAS:SAAS00015323}; EC=1.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00196, ECO:0000256|SAAS:SAAS00015317};; TaxID=1263086 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas; environmental samples.;" source="Megamonas funiformis CAG:377.;"
Mannitol-1-phosphate/altronate dehydrogenases (EC:1.1.1.17)
Mannitol-1-phosphate 5-dehydrogenase n=2 Tax=Megamonas RepID=H3KAU0_9FIRM
L3_122_000M1_scaffold_542_10
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(12511..12798)
DNA (288bp) protein (96aa)
Putative uncharacterized protein n=1 Tax=Megamonas funiformis YIT 11815 RepID=H3KAT9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHR32509.1}; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
hypothetical protein
L3_122_000M1_scaffold_542_11
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

12898..14025
DNA (1128bp) protein (376aa)
glycerate kinase (EC:2.7.1.31)
Glycerate kinase n=1 Tax=Megamonas funiformis YIT 11815 RepID=H3KAT8_9FIRM
Glycerate kinase {ECO:0000313|EMBL:EHR32508.1}; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
L3_122_000M1_scaffold_542_12
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

14036..14809
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Megamonas funiformis CAG:377 RepID=R6MEY5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHR32507.1}; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
Enoyl-CoA hydratase/carnithine racemase
L3_122_000M1_scaffold_542_13
Megamonas hypermegale, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

14982..15650
DNA (669bp) protein (223aa)
hypothetical protein n=1 Tax=Megamonas rupellensis RepID=UPI000377AECA
Protein of unknown function (DUF3298).
Uncharacterized protein {ECO:0000313|EMBL:CBL07313.1}; TaxID=657316 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas hypermegale ART12/1.;"
L3_122_000M1_scaffold_542_14
Megamonas funiformis CAG:377, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(15707..16378)
DNA (672bp) protein (224aa)
hypothetical protein n=1 Tax=Megamonas rupellensis RepID=UPI00035CD928
Uncharacterized protein {ECO:0000313|EMBL:CDB94524.1}; TaxID=1263086 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas; environmental samples.;" source="Megamonas funiformis CAG:377.;"
Cobalt transport protein.
L3_122_000M1_scaffold_542_15
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(16384..17181)
DNA (798bp) protein (266aa)
Putative uncharacterized protein n=1 Tax=Megamonas funiformis YIT 11815 RepID=H3KAT4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHR32504.1}; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
ABC-type cobalt transport system, ATPase component
L3_122_000M1_scaffold_542_16
Megamonas funiformis CAG:377, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(17165..18430)
DNA (1266bp) protein (422aa)
hypothetical protein n=1 Tax=Megamonas rupellensis RepID=UPI000379BBD2
ABC-type cobalt transport system, ATPase component
ABC-type cobalt transport system ATPase component {ECO:0000313|EMBL:CDB94529.1}; TaxID=1263086 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas; environmental samples.;" source="Megamonas funiformis CAG:377.;"
L3_122_000M1_scaffold_542_17
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(18817..19797)
DNA (981bp) protein (327aa)
Putative uncharacterized protein n=1 Tax=Megamonas funiformis YIT 11815 RepID=H3KAT2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHR32502.1}; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
hypothetical protein
L3_122_000M1_scaffold_542_18
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

20008..21366
DNA (1359bp) protein (453aa)
cytochrome bd quinol oxidase subunit 1 apoprotein (EC:1.10.3.-)
Putative uncharacterized protein n=1 Tax=Megamonas funiformis YIT 11815 RepID=H3KAT1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHR32501.1}; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
L3_122_000M1_scaffold_542_19
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

21366..22376
DNA (1011bp) protein (337aa)
cytochrome bd quinol oxidase subunit 2 apoprotein (EC:1.10.3.-)
Cytochrome d ubiquinol oxidase, subunit II n=2 Tax=Megamonas RepID=H3KAT0_9FIRM
Cytochrome d ubiquinol oxidase, subunit II {ECO:0000313|EMBL:EHR32500.1}; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
L3_122_000M1_scaffold_542_20
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

22385..24094
DNA (1710bp) protein (570aa)
Thiol reductant ABC exporter, CydD subunit n=1 Tax=Megamonas funiformis YIT 11815 RepID=H3KAS9_9FIRM
Thiol reductant ABC exporter, CydD subunit {ECO:0000313|EMBL:EHR32499.1}; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components
L3_122_000M1_scaffold_542_21
Megamonas funiformis CAG:377, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

24096..25808
DNA (1713bp) protein (571aa)
ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC (EC:3.6.3.44)
hypothetical protein n=1 Tax=Megamonas rupellensis RepID=UPI00036566C6
Uncharacterized protein {ECO:0000313|EMBL:CDB94536.1}; TaxID=1263086 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas; environmental samples.;" source="Megamonas funiformis CAG:377.;"
L3_122_000M1_scaffold_542_22
Megamonas funiformis CAG:377, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

25894..26649
DNA (756bp) protein (252aa)
Transcriptional regulators of sugar metabolism n=3 Tax=Megamonas RepID=D4KG05_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB94537.1}; TaxID=1263086 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas; environmental samples.;" source="Megamonas funiformis CAG:377.;"
Transcriptional regulators of sugar metabolism
L3_122_000M1_scaffold_542_23
Selenomonas flueggei, Selenomonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(26689..27006)
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V1L5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ49341.1}; TaxID=638302 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Selenomonas.;" source="Selenomonas flueggei ATCC 43531.;"
L-rhamnose 1-epimerase
L3_122_000M1_scaffold_542_24
Mitsuokella multacida, Mitsuokella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(27099..28382)
DNA (1284bp) protein (428aa)
Minor myo-inositol transporter IolF n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KN13_9FIRM
Minor myo-inositol transporter IolF {ECO:0000313|EMBL:EEX68752.1}; TaxID=500635 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Mitsuokella.;" source="Mitsuokella multacida DSM 20544.;"
minor myo-inositol transporter IolF
L3_122_000M1_scaffold_542_25
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(28498..29316)
DNA (819bp) protein (273aa)
Rhamnulose-1-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00770, ECO:0000256|SAAS:SAAS00048955}; EC=4.1.2.19 {ECO:0000256|HAMAP-Rule:MF_00770, ECO:0000256|SAAS:SAAS00048955};; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
L-rhamnulose 1-phosphate aldolase (EC:4.1.2.19)
Rhamnulose-1-phosphate aldolase n=1 Tax=Megamonas funiformis YIT 11815 RepID=H3KAS6_9FIRM
L3_122_000M1_scaffold_542_26
Mitsuokella multacida, Mitsuokella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(29354..30589)
DNA (1236bp) protein (412aa)
L-rhamnose isomerase {ECO:0000256|HAMAP-Rule:MF_00541}; EC=5.3.1.14 {ECO:0000256|HAMAP-Rule:MF_00541};; TaxID=500635 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Mitsuokella.;" source="Mitsuokella multacida DSM 20544.;"
L-rhamnose isomerase n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KN11_9FIRM
L-rhamnose isomerase
L3_122_000M1_scaffold_542_27
Acetonema longum, Acetonema, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(30632..32074)
DNA (1443bp) protein (481aa)
rhamnulokinase (EC:2.7.1.5)
rhamnulokinase n=1 Tax=Zymophilus raffinosivorans RepID=UPI000368182F
Rhamnulokinase {ECO:0000313|EMBL:EGO65540.1}; TaxID=1009370 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Acetonema.;" source="Acetonema longum DSM 6540.;"
L3_122_000M1_scaffold_542_28
Megamonas hypermegale, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

32373..33362
DNA (990bp) protein (330aa)
UDP-galactose 4-epimerase (EC:5.1.3.2)
UDP-galactose 4-epimerase {ECO:0000313|EMBL:CBL07300.1}; EC=5.1.3.2 {ECO:0000313|EMBL:CBL07300.1};; TaxID=657316 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas hypermegale ART12/1.;"
UDP-galactose 4-epimerase n=3 Tax=Megamonas RepID=D4KG03_9FIRM
L3_122_000M1_scaffold_542_29
Megamonas funiformis CAG:377, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

33399..34895
DNA (1497bp) protein (499aa)
Galactose-1-phosphate uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571}; Short=Gal-1-P uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571};; EC=2.7.7.12 {ECO:0000256|HAMAP-Rule:MF_00571};; UDP-glucose--hexose-1-phosphate uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571}; TaxID=1263086 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas; environmental samples.;" source="Megamonas funiformis CAG:377.;"
UTP-hexose-1-phosphate uridylyltransferase (EC:2.7.7.10)
Galactose-1-phosphate uridylyltransferase n=3 Tax=Megamonas RepID=H3KAS4_9FIRM
L3_122_000M1_scaffold_542_30
Megamonas funiformis CAG:377, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

35019..36050
DNA (1032bp) protein (344aa)
Transcriptional regulator, LacI family n=3 Tax=Megamonas RepID=D4KG00_9FIRM
transcriptional regulator, LacI family
Uncharacterized protein {ECO:0000313|EMBL:CDB94543.1}; TaxID=1263086 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas; environmental samples.;" source="Megamonas funiformis CAG:377.;"
Displaying items 1-30 of 38 in total

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