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L3_122_000M1_scaffold_637

Search features with annotation key words

Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_122_000M1_scaffold_637_1
unknown

Not on your lists

comp(3..83)
DNA (81bp) protein (27aa)

This feature has no annotations

L3_122_000M1_scaffold_637_2
Bacteroides coprophilus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(128..1558)
DNA (1431bp) protein (477aa)
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=547042 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprophilus DSM 18228 = JCM 13818.;"
tRNA modification GTPase MnmE n=1 Tax=Bacteroides coprophilus DSM 18228 = JCM 13818 RepID=S0F4S0_9BACE
tRNA modification GTPase trmE
L3_122_000M1_scaffold_637_3
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1631..2122)
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5W630_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ88092.1}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
diguanylate cyclase
L3_122_000M1_scaffold_637_4
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2195..3073)
DNA (879bp) protein (293aa)
Phosphorylase family n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5CW50_BACPM
Phosphorylase family {ECO:0000313|EMBL:EDY96497.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
purine or other phosphorylase family 1
L3_122_000M1_scaffold_637_5
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3121..4122)
DNA (1002bp) protein (334aa)
UPF0365 protein BN536_00402 n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5VJX1_9BACE
UPF0365 protein BN536_00402 {ECO:0000256|HAMAP-Rule:MF_01562}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
hypothetical protein
L3_122_000M1_scaffold_637_6
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4165..4629)
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5VCP6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ88095.1}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
hypothetical protein
L3_122_000M1_scaffold_637_7
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4643..6061)
DNA (1419bp) protein (473aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5VX35_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ88096.1}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
hypothetical protein
L3_122_000M1_scaffold_637_8
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6295..7053
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5W635_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ88097.1}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
PP-loop domain-containing protein
L3_122_000M1_scaffold_637_9
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7057..7587)
DNA (531bp) protein (177aa)
Cyclic nucleotide-binding domain protein n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5CW44_BACPM
Cyclic nucleotide-binding domain protein {ECO:0000313|EMBL:EDY96491.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
Crp/Fnr family transcriptional regulator
L3_122_000M1_scaffold_637_10
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7702..9354
DNA (1653bp) protein (551aa)
Hydroxylamine reductase {ECO:0000256|HAMAP-Rule:MF_00069, ECO:0000256|SAAS:SAAS00038686}; EC=1.7.99.1 {ECO:0000256|HAMAP-Rule:MF_00069, ECO:0000256|SAAS:SAAS00150119};; Hybrid-cluster protein {ECO:0000256|HAMAP-Rule:MF_00069}; Prismane protein {ECO:0000256|HAMAP-Rule:MF_00069}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
Hydroxylamine reductase n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5VBZ0_9BACE
hydroxylamine reductase
L3_122_000M1_scaffold_637_11
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9359..10375)
DNA (1017bp) protein (339aa)
Peptidase, M28 family {ECO:0000313|EMBL:EDY96489.1}; EC=3.4.-.- {ECO:0000313|EMBL:EDY96489.1};; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
Peptidase, M28 family n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5CW42_BACPM
peptidase M28
L3_122_000M1_scaffold_637_12
Prevotella pleuritidis, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10483..12135)
DNA (1653bp) protein (551aa)
Lipoprotein associated domain protein n=1 Tax=Prevotella pleuritidis F0068 RepID=U2MV42_9BACT
Lipoprotein associated domain protein {ECO:0000313|EMBL:ERK03064.1}; TaxID=1081904 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella pleuritidis F0068.;"
L3_122_000M1_scaffold_637_13
Prevotella sp. CAG:5226, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12525..13715)
DNA (1191bp) protein (397aa)
Methyltransferase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362026};; TaxID=1262930 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:5226.;"
Modification methylase CcrMI n=1 Tax=Prevotella sp. CAG:5226 RepID=R6AFV0_9BACT
DNA methylase n-4/n-6 domain protein
L3_122_000M1_scaffold_637_14
Prevotella sp. CAG:873, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13715..14563)
DNA (849bp) protein (283aa)
Site-specific DNA-methyltransferase (adenine-specific) {ECO:0000256|RuleBase:RU361257}; EC=2.1.1.72 {ECO:0000256|RuleBase:RU361257};; TaxID=1262936 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:873.;"
Modification methylase EcoRV n=1 Tax=Prevotella sp. CAG:873 RepID=R7J2X0_9BACT
DNA adenine methylase Dam
L3_122_000M1_scaffold_637_15
Porphyromonas endodontalis, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14636..15052)
DNA (417bp) protein (139aa)
Restriction endonuclease EcoRV n=1 Tax=Porphyromonas endodontalis ATCC 35406 RepID=C3J9L6_9PORP
Restriction endonuclease EcoRV {ECO:0000313|EMBL:EEN83097.1}; TaxID=553175 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas endodontalis ATCC 35406.;"
Restriction endonuclease EcoRV
L3_122_000M1_scaffold_637_16
Porphyromonas gulae, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15311..15433)
DNA (123bp) protein (41aa)
type II restriction deoxyribonuclease n=1 Tax=Porphyromonas gulae RepID=UPI000371B2C8
Restriction endonuclease {ECO:0000313|EMBL:KGN85597.1}; TaxID=111105 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas gulae.;"
Restriction endonuclease EcoRV
L3_122_000M1_scaffold_637_17
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15907..16584
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5VCP2_9BACE
MIP family channel protein {ECO:0000313|EMBL:EDY96481.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
MIP family channel protein
L3_122_000M1_scaffold_637_18
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16663..17037
DNA (375bp) protein (125aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=B5CW33_BACPM
Uncharacterized protein {ECO:0000313|EMBL:EDY96480.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
hypothetical protein
L3_122_000M1_scaffold_637_19
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17051..18016)
DNA (966bp) protein (322aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5VBY3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ88088.1}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
hypothetical protein
L3_122_000M1_scaffold_637_20
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18030..18560)
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5W625_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ88087.1}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
NLP/P60 protein
L3_122_000M1_scaffold_637_21
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18741..21560)
DNA (2820bp) protein (940aa)
Peptidase M16 inactive domain protein {ECO:0000313|EMBL:EDY96475.1}; EC=3.4.24.- {ECO:0000313|EMBL:EDY96475.1};; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
Peptidase M16 inactive domain protein n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5CW28_BACPM
peptidase M16 domain-containing protein
L3_122_000M1_scaffold_637_22
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21588..22535)
DNA (948bp) protein (316aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
thioredoxin reductase (EC:1.8.1.9)
Thioredoxin reductase n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5VBY0_9BACE
L3_122_000M1_scaffold_637_23
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


22749..24512
DNA (1764bp) protein (588aa)
Aspartate--tRNA ligase {ECO:0000313|EMBL:EDY96473.1}; EC=6.1.1.12 {ECO:0000313|EMBL:EDY96473.1};; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
aspartyl-tRNA synthetase (EC:6.1.1.12)
Aspartate--tRNA ligase n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5CW26_BACPM
L3_122_000M1_scaffold_637_24
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24548..24937
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5VRG9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ86126.1}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
GtrA family protein
L3_122_000M1_scaffold_637_25
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24934..25362)
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5W041_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ86127.1}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
acetohydroxyacid synthase small subunit
L3_122_000M1_scaffold_637_26
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25375..26688)
DNA (1314bp) protein (438aa)
Phenylacetate-coenzyme A ligase {ECO:0000256|PIRNR:PIRNR006444}; EC=6.2.1.30 {ECO:0000256|PIRNR:PIRNR006444};; Phenylacetyl-CoA ligase {ECO:0000256|PIRNR:PIRNR006444}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
phenylacetate--CoA ligase (EC:6.2.1.30)
Uncharacterized protein n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5CW23_BACPM
L3_122_000M1_scaffold_637_27
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26948..29797)
DNA (2850bp) protein (950aa)
Glycine dehydrogenase (aminomethyl-transferring) {ECO:0000256|SAAS:SAAS00022796}; EC=1.4.4.2 {ECO:0000256|SAAS:SAAS00022796};; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
glycine dehydrogenase (EC:1.4.4.2)
Glycine dehydrogenase n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5CW20_BACPM
L3_122_000M1_scaffold_637_28
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29844..30485)
DNA (642bp) protein (214aa)
Metallo-beta-lactamase domain protein n=2 Tax=Bacteroides RepID=B5CW19_BACPM
Uncharacterized protein {ECO:0000313|EMBL:CCZ86145.1}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
metallo-beta-lactamase
L3_122_000M1_scaffold_637_29
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30491..31117)
DNA (627bp) protein (209aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00277524};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00074}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
Ribosomal RNA small subunit methyltransferase G n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5CW18_BACPM
16S rRNA methyltransferase
L3_122_000M1_scaffold_637_30
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31124..31987)
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5CW17_BACPM
Uncharacterized protein {ECO:0000313|EMBL:EDY96464.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
hypothetical protein
Displaying items 1-30 of 47 in total

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