ggKbase home page

L3_122_000M1_scaffold_654

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_122_000M1_scaffold_654_1
Bacteroides coprocola, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2..484
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Bacteroides coprocola DSM 17136 RepID=B3JHE1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDV01600.1}; TaxID=470145 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprocola DSM 17136.;"
TonB-dependent receptor plug
L3_122_000M1_scaffold_654_2
Bacteroides coprocola, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(647..1870)
DNA (1224bp) protein (408aa)
3-deoxy-D-manno-octulosonic-acid transferase n=1 Tax=Bacteroides coprocola DSM 17136 RepID=B3JHE0_9BACE
3-deoxy-D-manno-octulosonic-acid transferase {ECO:0000313|EMBL:EDV01599.1}; TaxID=470145 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprocola DSM 17136.;"
3-deoxy-D-manno-octulosonic acid transferase
L3_122_000M1_scaffold_654_3
Bacteroides coprocola CAG:162, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1879..3396)
DNA (1518bp) protein (506aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprocola CAG:162.;"
gltX; glutamyl-tRNA synthetase (EC:6.1.1.17)
Glutamate--tRNA ligase n=1 Tax=Bacteroides coprocola CAG:162 RepID=R6CK71_9BACE
L3_122_000M1_scaffold_654_4
Bacteroides coprocola, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3481..5538
DNA (2058bp) protein (686aa)
7TM receptor with intracellular HD hydrolase n=1 Tax=Bacteroides coprocola DSM 17136 RepID=B3JHD8_9BACE
7TM receptor with intracellular HD hydrolase {ECO:0000313|EMBL:EDV01597.1}; TaxID=470145 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprocola DSM 17136.;"
7TM receptor with intracellular metal dependent phosphohydrolase
L3_122_000M1_scaffold_654_5
Bacteroides coprocola, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5639..6760
DNA (1122bp) protein (374aa)
Pectate lyase {ECO:0000313|EMBL:EDV01596.1}; EC=4.2.2.2 {ECO:0000313|EMBL:EDV01596.1};; TaxID=470145 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprocola DSM 17136.;"
Pectate lyase n=1 Tax=Bacteroides coprocola DSM 17136 RepID=B3JHD7_9BACE
silent information regulator protein Sir2
L3_122_000M1_scaffold_654_6
Bacteroides coprocola, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7010..7480)
DNA (471bp) protein (157aa)
protein tyrosine phosphatase (EC:3.1.3.2)
Low molecular weight phosphotyrosine protein phosphatase n=2 Tax=Bacteroides RepID=B3JHD6_9BACE
Low molecular weight phosphotyrosine protein phosphatase {ECO:0000313|EMBL:EDV01595.1}; TaxID=470145 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprocola DSM 17136.;"
L3_122_000M1_scaffold_654_7
Bacteroides coprocola, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7477..8193)
DNA (717bp) protein (239aa)
PHP domain protein {ECO:0000313|EMBL:EDV01594.1}; EC=3.1.3.- {ECO:0000313|EMBL:EDV01594.1};; TaxID=470145 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprocola DSM 17136.;"
PHP domain protein n=1 Tax=Bacteroides coprocola DSM 17136 RepID=B3JHD5_9BACE
PHP domain-containing protein
L3_122_000M1_scaffold_654_8
Bacteroides coprocola, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8205..10667)
DNA (2463bp) protein (821aa)
Primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; TaxID=470145 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprocola DSM 17136.;"
Primosomal protein N n=1 Tax=Bacteroides coprocola DSM 17136 RepID=B3JHD4_9BACE
primosomal protein N'
L3_122_000M1_scaffold_654_9
Bacteroides coprocola, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10758..11735
DNA (978bp) protein (326aa)
Oxidoreductase, NAD-binding domain protein n=2 Tax=Bacteroides RepID=B3JHD3_9BACE
Oxidoreductase, NAD-binding domain protein {ECO:0000313|EMBL:EDV01592.1}; TaxID=470145 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprocola DSM 17136.;"
oxidoreductase domain-containing protein
L3_122_000M1_scaffold_654_10
Bacteroides coprocola CAG:162, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11828..12412)
DNA (585bp) protein (195aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=B3JHD2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDA73279.1}; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprocola CAG:162.;"
hypothetical protein
L3_122_000M1_scaffold_654_11
Bacteroides coprocola CAG:162, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12717..13145
DNA (429bp) protein (143aa)
Hsp20/alpha crystallin family protein n=1 Tax=Bacteroides coprocola CAG:162 RepID=R6CCE0_9BACE
Hsp20/alpha crystallin family protein {ECO:0000313|EMBL:CDA73280.1}; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprocola CAG:162.;"
heat shock protein Hsp20
L3_122_000M1_scaffold_654_12
Bacteroides coprocola, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13231..13974
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Bacteroides coprocola DSM 17136 RepID=B3JHD0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDV01589.1}; TaxID=470145 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprocola DSM 17136.;"
arginase
L3_122_000M1_scaffold_654_13
Bacteroides sp. CAG:1076, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13982..16702)
DNA (2721bp) protein (907aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:1076 RepID=R5MQD8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCY93955.1}; TaxID=1262735 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:1076.;"
SusC/RagA family TonB-linked outer membrane protein
L3_122_000M1_scaffold_654_14
Bacteroides coprocola CAG:162, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16888..17463
DNA (576bp) protein (192aa)
RNA polymerase sigma-70 factor n=1 Tax=Bacteroides coprocola CAG:162 RepID=R6D607_9BACE
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:CDA73282.1}; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprocola CAG:162.;"
RNA polymerase ECF-type sigma factor
L3_122_000M1_scaffold_654_15
Bacteroides coprocola CAG:162, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17546..18538
DNA (993bp) protein (331aa)
Sigma factor regulatory protein FecR/PupR family n=1 Tax=Bacteroides coprocola CAG:162 RepID=R6C9M2_9BACE
Sigma factor regulatory protein FecR/PupR family {ECO:0000313|EMBL:CDA73283.1}; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprocola CAG:162.;"
anti-sigma factor
L3_122_000M1_scaffold_654_16
Bacteroides coprocola, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18705..22040
DNA (3336bp) protein (1112aa)
TonB-linked outer membrane protein, SusC/RagA family n=1 Tax=Bacteroides coprocola DSM 17136 RepID=B3JHC7_9BACE
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:EDV01586.1}; TaxID=470145 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprocola DSM 17136.;"
TonB-dependent receptor
L3_122_000M1_scaffold_654_17
Bacteroides coprocola CAG:162, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22059..23681
DNA (1623bp) protein (541aa)
Uncharacterized protein n=1 Tax=Bacteroides coprocola CAG:162 RepID=R6CCE4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDA73285.1}; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprocola CAG:162.;"
hypothetical protein
L3_122_000M1_scaffold_654_18
Bacteroides coprocola CAG:162, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23709..24806
DNA (1098bp) protein (366aa)
Uncharacterized protein n=1 Tax=Bacteroides coprocola CAG:162 RepID=R6D611_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDA73287.1}; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprocola CAG:162.;"
hypothetical protein
L3_122_000M1_scaffold_654_19
Bacteroides coprocola CAG:162, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24831..25994
DNA (1164bp) protein (388aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=B3JHC4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDA73288.1}; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprocola CAG:162.;"
Domain of unknown function (DUF1735).
L3_122_000M1_scaffold_654_20
Bacteroides coprocola CAG:162, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26022..26189)
DNA (168bp) protein (56aa)
Uncharacterized protein n=1 Tax=Bacteroides coprocola CAG:162 RepID=R6CKC5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDA73289.1}; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprocola CAG:162.;"
L3_122_000M1_scaffold_654_21
Bacteroides coprocola CAG:162, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26466..29093
DNA (2628bp) protein (876aa)
calcium-translocating P-type ATPase (EC:3.6.3.8)
Calcium-translocating P-type ATPase PMCA-type n=1 Tax=Bacteroides coprocola CAG:162 RepID=R6CHB3_9BACE
Calcium-translocating P-type ATPase PMCA-type {ECO:0000313|EMBL:CDA72254.1}; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprocola CAG:162.;"
L3_122_000M1_scaffold_654_22
Bacteroides coprocola, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29121..29735
DNA (615bp) protein (205aa)
HAD hydrolase, family IA, variant 3 n=1 Tax=Bacteroides coprocola DSM 17136 RepID=B3JHC1_9BACE
HAD hydrolase, family IA, variant 3 {ECO:0000313|EMBL:EDV01580.1}; TaxID=470145 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprocola DSM 17136.;"
haloacid dehalogenase
L3_122_000M1_scaffold_654_23
Bacteroides coprocola, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29744..30670
DNA (927bp) protein (309aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=470145 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprocola DSM 17136.;"
riboflavin biosynthesis protein RibF (EC:2.7.1.26 2.7.7.2)
Riboflavin biosynthesis protein RibF n=1 Tax=Bacteroides coprocola DSM 17136 RepID=B3JHC0_9BACE
L3_122_000M1_scaffold_654_24
Bacteroides coprocola, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30758..32866)
DNA (2109bp) protein (703aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=B3JHB9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDV01578.1}; TaxID=470145 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprocola DSM 17136.;"
Glycoside hydrolase 97
L3_122_000M1_scaffold_654_25
Bacteroides coprocola CAG:162, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33179..33589
DNA (411bp) protein (137aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=B3JHB8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDA70907.1}; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprocola CAG:162.;"
hypothetical protein
L3_122_000M1_scaffold_654_26
Bacteroides coprocola CAG:162, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33606..34421
DNA (816bp) protein (272aa)
CAAX amino terminal protease family protein n=1 Tax=Bacteroides coprocola CAG:162 RepID=R6C3C4_9BACE
CAAX amino terminal protease family protein {ECO:0000313|EMBL:CDA70908.1}; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprocola CAG:162.;"
Abortive infection protein
L3_122_000M1_scaffold_654_27
Bacteroides coprocola CAG:162, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34434..35072
DNA (639bp) protein (213aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=B3JHB6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDA70909.1}; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprocola CAG:162.;"
hypothetical protein
L3_122_000M1_scaffold_654_28
Bacteroides coprocola CAG:162, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35086..35319
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Bacteroides coprocola CAG:162 RepID=R6C5Y8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDA70910.1}; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprocola CAG:162.;"
hypothetical protein
L3_122_000M1_scaffold_654_29
Bacteroides coprocola, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35325..35534
DNA (210bp) protein (70aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=B3JHB5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDV01574.1}; TaxID=470145 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprocola DSM 17136.;"
transcriptional regulator, XRE family
L3_122_000M1_scaffold_654_30
Bacteroides coprocola, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35642..37555
DNA (1914bp) protein (638aa)
DEAD/DEAH box helicase n=2 Tax=Bacteroides RepID=B3JHB4_9BACE
DEAD/DEAH box helicase {ECO:0000313|EMBL:EDV01573.1}; TaxID=470145 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprocola DSM 17136.;"
DEAD/DEAH box helicase
Displaying items 1-30 of 40 in total

View Taxonomy