ggKbase home page

L3_122_000M1_scaffold_704

Search features with annotation key words

Displaying items 1-30 of 88 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_122_000M1_scaffold_704_1
Bacteroides coprocola CAG:162, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(244..1437)
DNA (1194bp) protein (398aa)
aspartate transaminase (EC:2.6.1.1)
Uncharacterized protein n=1 Tax=Bacteroides coprocola CAG:162 RepID=R6C475_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDA70295.1}; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprocola CAG:162.;"
L3_122_000M1_scaffold_704_2
Bacteroides coprocola, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1510..2211)
DNA (702bp) protein (234aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=B3JJQ4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDV00788.1}; TaxID=470145 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprocola DSM 17136.;"
hypothetical protein
L3_122_000M1_scaffold_704_3
Bacteroides coprocola CAG:162, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2223..3437)
DNA (1215bp) protein (405aa)
Riboflavin biosynthesis protein RibBA n=2 Tax=Bacteroides RepID=B3JJQ5_9BACE
Riboflavin biosynthesis protein RibBA {ECO:0000256|HAMAP-Rule:MF_01283, ECO:0000256|SAAS:SAAS00280052}; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprocola CAG:162.;"
3,4-dihydroxy-2-butanone 4-phosphate synthase
L3_122_000M1_scaffold_704_4
Bacteroides coprocola CAG:162, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3442..5349)
DNA (1908bp) protein (636aa)
Permease YjgP/YjgQ family n=1 Tax=Bacteroides coprocola CAG:162 RepID=R6CY44_9BACE
Permease YjgP/YjgQ family {ECO:0000313|EMBL:CDA70292.1}; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprocola CAG:162.;"
YjgP/YjgQ family permease
L3_122_000M1_scaffold_704_5
Bacteroides coprocola, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5429..5818)
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Bacteroides coprocola DSM 17136 RepID=B3JJQ7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDV00791.1}; TaxID=470145 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprocola DSM 17136.;"
hypothetical protein
L3_122_000M1_scaffold_704_6
Bacteroides coprocola CAG:162, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6437..7825)
DNA (1389bp) protein (463aa)
Phosphoglucosamine mutase n=1 Tax=Bacteroides coprocola CAG:162 RepID=R6C470_9BACE
Phosphoglucosamine mutase {ECO:0000313|EMBL:CDA70290.1}; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprocola CAG:162.;"
phosphoglucomutase/phosphomannomutase
L3_122_000M1_scaffold_704_7
Bacteroides sp. CAG:530, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7825..8502)
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:530 RepID=R6CWP9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDA75931.1}; TaxID=1262741 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:530.;"
hypothetical protein
L3_122_000M1_scaffold_704_8
unknown

Not on your lists

comp(8603..9343)
DNA (741bp) protein (247aa)

This feature has no annotations

L3_122_000M1_scaffold_704_9
unknown

Not on your lists

comp(9355..9489)
DNA (135bp) protein (45aa)

This feature has no annotations

L3_122_000M1_scaffold_704_10
Bacteroides coprocola CAG:162, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9489..10574)
DNA (1086bp) protein (362aa)
Mucin-desulfating sulfatase n=1 Tax=Bacteroides coprocola CAG:162 RepID=R6C1Q4_9BACE
Mucin-desulfating sulfatase {ECO:0000313|EMBL:CDA70288.1}; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprocola CAG:162.;"
aminoglycoside phosphotransferase
L3_122_000M1_scaffold_704_11
Bacteroides coprocola CAG:162, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10593..12137)
DNA (1545bp) protein (515aa)
Alpha-N-acetylgalactosaminidase (EC:3.2.1.49)
Oxidoreductase NAD-binding domain protein n=1 Tax=Bacteroides coprocola CAG:162 RepID=R6CY40_9BACE
Oxidoreductase NAD-binding domain protein {ECO:0000313|EMBL:CDA70287.1}; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprocola CAG:162.;"
L3_122_000M1_scaffold_704_12
Bacteroides coprocola, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12239..13273)
DNA (1035bp) protein (345aa)
DHH family protein n=1 Tax=Bacteroides coprocola DSM 17136 RepID=B3JJR2_9BACE
DHH family protein {ECO:0000313|EMBL:EDV00796.1}; TaxID=470145 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprocola DSM 17136.;"
phosphoesterase RecJ domain-containing protein
L3_122_000M1_scaffold_704_13
Bacteroides coprocola, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13322..14188)
DNA (867bp) protein (289aa)
ComEC/Rec2-like protein n=1 Tax=Bacteroides coprocola DSM 17136 RepID=B3JJR3_9BACE
ComEC/Rec2-like protein {ECO:0000313|EMBL:EDV00797.1}; TaxID=470145 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprocola DSM 17136.;"
ComEC/Rec2-like protein
L3_122_000M1_scaffold_704_14
Bacteroides coprocola, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14152..15228)
DNA (1077bp) protein (359aa)
ComEC/Rec2-like protein n=1 Tax=Bacteroides coprocola DSM 17136 RepID=B3JJR3_9BACE
ComEC/Rec2-like protein {ECO:0000313|EMBL:EDV00797.1}; TaxID=470145 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprocola DSM 17136.;"
ComEC/Rec2-like protein
L3_122_000M1_scaffold_704_15
Bacteroides coprocola, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15233..15892)
DNA (660bp) protein (220aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=470145 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprocola DSM 17136.;"
Ribulose-phosphate 3-epimerase n=1 Tax=Bacteroides coprocola DSM 17136 RepID=B3JJR4_9BACE
ribulose-phosphate 3-epimerase
L3_122_000M1_scaffold_704_16
Bacteroides coprocola, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15969..17264)
DNA (1296bp) protein (432aa)
Uncharacterized protein n=1 Tax=Bacteroides coprocola DSM 17136 RepID=B3JJR5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDV00799.1}; TaxID=470145 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprocola DSM 17136.;"
hypothetical protein
L3_122_000M1_scaffold_704_17
Bacteroides coprocola CAG:162, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17261..17869)
DNA (609bp) protein (203aa)
Sigma-70 region 2 n=1 Tax=Bacteroides coprocola CAG:162 RepID=R6CY33_9BACE
Sigma-70 region 2 {ECO:0000313|EMBL:CDA70282.1}; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprocola CAG:162.;"
ECF subfamily RNA polymerase sigma-24 subunit
L3_122_000M1_scaffold_704_18
Bacteroides coprocola CAG:162, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17969..18709
DNA (741bp) protein (247aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=B3JJR7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDA70281.1}; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprocola CAG:162.;"
hypothetical protein
L3_122_000M1_scaffold_704_19
Bacteroides coprocola, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18783..19754)
DNA (972bp) protein (324aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043681}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=470145 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprocola DSM 17136.;"
Methionyl-tRNA formyltransferase (EC:2.1.2.9)
Methionyl-tRNA formyltransferase n=1 Tax=Bacteroides coprocola DSM 17136 RepID=B3JJR8_9BACE
L3_122_000M1_scaffold_704_20
Bacteroides coprocola CAG:162, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19769..21568)
DNA (1800bp) protein (600aa)
Chloride transporter, ClC family n=2 Tax=Bacteroides RepID=B3JJR9_9BACE
Chloride transporter ClC family {ECO:0000313|EMBL:CDA70279.1}; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprocola CAG:162.;"
Cl-channel voltage-gated family protein
L3_122_000M1_scaffold_704_21
Bacteroides coprocola CAG:162, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21584..22114)
DNA (531bp) protein (177aa)
Sua5/YciO/YrdC/YwlC family protein n=2 Tax=Bacteroides RepID=B3JJS0_9BACE
Sua5/YciO/YrdC/YwlC family protein {ECO:0000313|EMBL:CDA70278.1}; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprocola CAG:162.;"
Sua5/YciO/YrdC/YwlC family protein
L3_122_000M1_scaffold_704_22
Bacteroides coprocola, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22237..23361
DNA (1125bp) protein (375aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=470145 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprocola DSM 17136.;"
DNA polymerase IV (EC:2.7.7.7)
DNA polymerase IV n=1 Tax=Bacteroides coprocola DSM 17136 RepID=B3JJS1_9BACE
L3_122_000M1_scaffold_704_23
Bacteroides coprocola CAG:162, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23533..24393
DNA (861bp) protein (287aa)
Sigma-70 region 2 n=4 Tax=Bacteroides RepID=B3JJS2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDA70276.1}; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprocola CAG:162.;"
RNA polymerase sigma factor rpoD
L3_122_000M1_scaffold_704_24
Bacteroides coprocola CAG:162, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24561..24971
DNA (411bp) protein (137aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=B3JJS3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDA70275.1}; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprocola CAG:162.;"
hypothetical protein
L3_122_000M1_scaffold_704_25
Bacteroides coprocola CAG:162, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24974..26197
DNA (1224bp) protein (408aa)
Uncharacterized protein n=1 Tax=Bacteroides coprocola CAG:162 RepID=R6CBI4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDA70274.1}; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprocola CAG:162.;"
peptidase C11 clostripain
L3_122_000M1_scaffold_704_26
Bacteroides coprocola CAG:162, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26200..26727)
DNA (528bp) protein (176aa)
DJ-1/PfpI family protein n=1 Tax=Bacteroides coprocola CAG:162 RepID=R6C1P0_9BACE
DJ-1/PfpI family protein {ECO:0000313|EMBL:CDA70273.1}; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprocola CAG:162.;"
protease I
L3_122_000M1_scaffold_704_27
Bacteroides coprocola CAG:162, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26891..27235
DNA (345bp) protein (115aa)
Transcriptional regulator HxlR family n=1 Tax=Bacteroides coprocola CAG:162 RepID=R6CM46_9BACE
Transcriptional regulator HxlR family {ECO:0000313|EMBL:CDA72606.1}; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprocola CAG:162.;"
transcriptional regulator
L3_122_000M1_scaffold_704_28
Bacteroides coprocola, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27318..31439
DNA (4122bp) protein (1374aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Bacteroides coprocola DSM 17136 RepID=B3JJS7_9BACE
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:EDV00811.1}; TaxID=470145 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprocola DSM 17136.;"
Signal transduction histidine kinase
L3_122_000M1_scaffold_704_29
Bacteroides coprocola CAG:162, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31743..32237
DNA (495bp) protein (165aa)
Glycosyl hydrolase family 16 n=1 Tax=Bacteroides coprocola CAG:162 RepID=R6C7S6_9BACE
Glycosyl hydrolase family 16 {ECO:0000313|EMBL:CDA72608.1}; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprocola CAG:162.;"
Beta-glucanase/Beta-glucan synthetase
L3_122_000M1_scaffold_704_30
Bacteroides coprocola CAG:162, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32210..32443
DNA (234bp) protein (78aa)
Glycosyl hydrolase family 16 n=1 Tax=Bacteroides coprocola CAG:162 RepID=R6C7S6_9BACE
Glycosyl hydrolase family 16 {ECO:0000313|EMBL:CDA72608.1}; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprocola CAG:162.;"
Beta-glucanase/Beta-glucan synthetase
Displaying items 1-30 of 88 in total

View Taxonomy