ggKbase home page

L3_122_000M1_scaffold_813

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_122_000M1_scaffold_813_1
Bacteroides coprocola, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1..114)
DNA (114bp) protein (38aa)
Uncharacterized protein n=1 Tax=Bacteroides coprocola DSM 17136 RepID=B3JJL1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDV02103.1}; TaxID=470145 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprocola DSM 17136.;"
hypothetical protein
L3_122_000M1_scaffold_813_2
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

956..1798
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis HMW 615 RepID=K1FYE3_BACFG
Peptidase C39 like family protein {ECO:0000313|EMBL:EYB09575.1}; TaxID=1339310 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3783N1-6.;"
hypothetical protein
L3_122_000M1_scaffold_813_3
unknown

Not on your lists

1844..2314
DNA (471bp) protein (157aa)

This feature has no annotations

L3_122_000M1_scaffold_813_4
Bacteroides coprocola, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2592..3746
DNA (1155bp) protein (385aa)
Uncharacterized protein n=1 Tax=Bacteroides coprocola DSM 17136 RepID=B3JQY6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDU98626.1}; TaxID=470145 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprocola DSM 17136.;"
hypothetical protein
L3_122_000M1_scaffold_813_5
Bacteroides coprocola, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3856..6057)
DNA (2202bp) protein (734aa)
Putative alpha-1,2-mannosidase n=2 Tax=Bacteroides RepID=B3JQY7_9BACE
Putative alpha-1,2-mannosidase {ECO:0000313|EMBL:EDU98627.1}; TaxID=470145 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprocola DSM 17136.;"
glycoside hydrolase
L3_122_000M1_scaffold_813_6
Bacteroides coprocola CAG:162, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6183..7154)
DNA (972bp) protein (324aa)
Mannose-6-phosphate isomerase (EC:5.3.1.8)
Putative mannose-6-phosphate isomerase, class I n=2 Tax=Bacteroides RepID=B3JQY8_9BACE
Putative mannose-6-phosphate isomerase class I {ECO:0000313|EMBL:CDA70554.1}; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprocola CAG:162.;"
L3_122_000M1_scaffold_813_7
Bacteroides coprocola CAG:162, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7310..8740)
DNA (1431bp) protein (477aa)
Uncharacterized protein n=1 Tax=Bacteroides coprocola CAG:162 RepID=R6C2I7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDA70553.1}; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprocola CAG:162.;"
hypothetical protein
L3_122_000M1_scaffold_813_8
Bacteroides coprocola CAG:162, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8771..10483)
DNA (1713bp) protein (571aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=R6CYY3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDA70552.1}; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprocola CAG:162.;"
L3_122_000M1_scaffold_813_9
Bacteroides coprocola CAG:162, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10889..12286)
DNA (1398bp) protein (466aa)
NADH-quinone oxidoreductase subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_00445};; NADH dehydrogenase I subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; NDH-1 subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprocola CAG:162.;"
NAD(P)H-quinone oxidoreductase subunit 2 (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit N n=1 Tax=Bacteroides coprocola CAG:162 RepID=R6CGE9_9BACE
L3_122_000M1_scaffold_813_10
Bacteroides coprocola CAG:162, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12320..13765)
DNA (1446bp) protein (482aa)
proton-translocating NADH-quinone oxidoreductase subunit M (EC:1.6.99.5)
Proton-translocating NADH-quinone oxidoreductase, chain M n=2 Tax=Bacteroides RepID=B3JEW2_9BACE
Proton-translocating NADH-quinone oxidoreductase chain M {ECO:0000313|EMBL:CDA70550.1}; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprocola CAG:162.;"
L3_122_000M1_scaffold_813_11
Bacteroides coprocola, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13801..15693)
DNA (1893bp) protein (631aa)
proton-translocating NADH-quinone oxidoreductase subunit L (EC:1.6.99.5)
Proton-translocating NADH-quinone oxidoreductase, chain L n=1 Tax=Bacteroides coprocola DSM 17136 RepID=B3JEW3_9BACE
Proton-translocating NADH-quinone oxidoreductase, chain L {ECO:0000313|EMBL:EDV02492.1}; TaxID=470145 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprocola DSM 17136.;"
L3_122_000M1_scaffold_813_12
Bacteroides coprocola CAG:162, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15711..16028)
DNA (318bp) protein (106aa)
NADH-quinone oxidoreductase subunit K {ECO:0000256|HAMAP-Rule:MF_01456}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01456};; NADH dehydrogenase I subunit K {ECO:0000256|HAMAP-Rule:MF_01456}; NDH-1 subunit K {ECO:0000256|HAMAP-Rule:MF_01456}; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprocola CAG:162.;"
NADH-quinone oxidoreductase subunit K n=2 Tax=Bacteroides RepID=B3JEW4_9BACE
NAD(P)H-quinone oxidoreductase subunit 4L
L3_122_000M1_scaffold_813_13
Bacteroides coprocola CAG:162, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16040..16555)
DNA (516bp) protein (172aa)
NADH-ubiquinone/plastoquinone oxidoreductase chain 6 n=2 Tax=Bacteroides RepID=B3JEW5_9BACE
NADH-ubiquinone/plastoquinone oxidoreductase chain 6 {ECO:0000313|EMBL:CDA70547.1}; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprocola CAG:162.;"
NADH-ubiquinone/plastoquinone oxidoreductase chain 6
L3_122_000M1_scaffold_813_14
Bacteroides coprocola, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16568..17035)
DNA (468bp) protein (156aa)
4Fe-4S binding domain protein n=2 Tax=Bacteroides RepID=B3JEW6_9BACE
4Fe-4S binding domain protein {ECO:0000313|EMBL:EDV02495.1}; TaxID=470145 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprocola DSM 17136.;"
4Fe-4S ferredoxin
L3_122_000M1_scaffold_813_15
Bacteroides coprocola CAG:162, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17061..18152)
DNA (1092bp) protein (364aa)
NADH-quinone oxidoreductase subunit H {ECO:0000256|HAMAP-Rule:MF_01350}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01350};; NADH dehydrogenase I subunit H {ECO:0000256|HAMAP-Rule:MF_01350}; NDH-1 subunit H {ECO:0000256|HAMAP-Rule:MF_01350}; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprocola CAG:162.;"
NADH dehydrogenase (quinone) (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit H n=2 Tax=Bacteroides RepID=B3JEW7_9BACE
L3_122_000M1_scaffold_813_16
Bacteroides coprocola, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18187..19809)
DNA (1623bp) protein (541aa)
NADH-quinone oxidoreductase subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01358};; NADH dehydrogenase I subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; NDH-1 subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; TaxID=470145 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprocola DSM 17136.;"
Respiratory-chain NADH dehydrogenase, 49 Kd subunit n=2 Tax=Bacteroides RepID=B3JEW8_9BACE
NADH-ubiquinone oxidoreductase chain 49kDa
L3_122_000M1_scaffold_813_17
Bacteroides coprocola, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19834..20406)
DNA (573bp) protein (191aa)
NADH-quinone oxidoreductase subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01356};; NADH dehydrogenase I subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; NDH-1 subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; TaxID=470145 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprocola DSM 17136.;"
NAD(P)H-quinone oxidoreductase subunit K (EC:1.6.99.3 1.6.99.5)
NADH-quinone oxidoreductase subunit B n=2 Tax=Bacteroides RepID=B3JEW9_9BACE
L3_122_000M1_scaffold_813_18
Bacteroides coprocola CAG:162, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20427..20777)
DNA (351bp) protein (117aa)
NADH-quinone oxidoreductase subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01394};; NADH dehydrogenase I subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; NDH-1 subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; NUO1 {ECO:0000256|HAMAP-Rule:MF_01394}; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprocola CAG:162.;"
NADH-quinone oxidoreductase subunit A n=2 Tax=Bacteroides RepID=B3JEX0_9BACE
NAD(P)H-quinone oxidoreductase subunit 3
L3_122_000M1_scaffold_813_19
Bacteroides coprocola CAG:162, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21686..23026)
DNA (1341bp) protein (447aa)
TrkA N-terminal domain protein n=1 Tax=Bacteroides coprocola CAG:162 RepID=R6CGE2_9BACE
TrkA N-terminal domain protein {ECO:0000313|EMBL:CDA70541.1}; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprocola CAG:162.;"
TrkA-N domain-containing protein
L3_122_000M1_scaffold_813_20
Bacteroides coprocola CAG:162, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23023..24930)
DNA (1908bp) protein (636aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00021618}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315}; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprocola CAG:162.;"
1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7)
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Bacteroides coprocola CAG:162 RepID=R6C4Z8_9BACE
L3_122_000M1_scaffold_813_21
Bacteroides coprocola CAG:162, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25023..26009
DNA (987bp) protein (329aa)
GSCFA family protein n=1 Tax=Bacteroides coprocola CAG:162 RepID=R6CCD8_9BACE
GSCFA family protein {ECO:0000313|EMBL:CDA70539.1}; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprocola CAG:162.;"
GSCFA domain-containing protein
L3_122_000M1_scaffold_813_22
Bacteroides coprocola CAG:162, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25985..28450
DNA (2466bp) protein (822aa)
alanine racemase (EC:5.1.1.1 6.3.2.10)
Alanine racemase n=2 Tax=Bacteroides RepID=B3JGP5_9BACE
Alanine racemase {ECO:0000313|EMBL:CDA70538.1}; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprocola CAG:162.;"
L3_122_000M1_scaffold_813_23
Bacteroides coprocola CAG:162, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28697..30010
DNA (1314bp) protein (438aa)
Acetyl xylan esterase (AXE1) n=2 Tax=Bacteroides RepID=B3JGP4_9BACE
Acetyl xylan esterase (AXE1) {ECO:0000313|EMBL:CDA70537.1}; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprocola CAG:162.;"
Acetyl xylan esterase
L3_122_000M1_scaffold_813_24
Bacteroides coprocola CAG:162, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30233..32323)
DNA (2091bp) protein (697aa)
SusD family protein n=2 Tax=Bacteroides RepID=R6CGE0_9BACE
SusD family protein {ECO:0000313|EMBL:CDA70536.1}; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprocola CAG:162.;"
RagB/SusD domain-containing protein
L3_122_000M1_scaffold_813_25
Bacteroides coprocola CAG:162, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32339..35593)
DNA (3255bp) protein (1085aa)
TonB-linked outer membrane protein, SusC/RagA family n=2 Tax=Bacteroides RepID=B3JGP2_9BACE
TonB-linked outer membrane protein SusC/RagA family {ECO:0000313|EMBL:CDA70535.1}; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprocola CAG:162.;"
TonB-dependent receptor
Displaying 25 items

View Taxonomy