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L3_122_000M1_scaffold_820

Search features with annotation key words

Displaying items 1-30 of 65 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_122_000M1_scaffold_820_1
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(341..2020)
DNA (1680bp) protein (560aa)
Cell envelope-like function transcriptional attenuator common domain protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SAJ1_9FIRM
Cell envelope-like function transcriptional attenuator common domain protein {ECO:0000313|EMBL:EDP21567.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
cell envelope-related function transcriptional attenuator common domain
L3_122_000M1_scaffold_820_2
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2037..2390)
DNA (354bp) protein (118aa)
Uncharacterized protein conserved in bacteria n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KBR4_9FIRM
hypothetical protein
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CBL02277.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L3_122_000M1_scaffold_820_3
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2394..4322)
DNA (1929bp) protein (643aa)
NAD+ synthase {ECO:0000313|EMBL:EDP21565.1}; EC=6.3.1.5 {ECO:0000313|EMBL:EDP21565.1};; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
NAD+ synthetase (EC:6.3.5.1)
NAD+ synthase n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SAI9_9FIRM
L3_122_000M1_scaffold_820_4
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4731..5171)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SAI8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDP21564.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
hypothetical protein
L3_122_000M1_scaffold_820_5
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5430..6266
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SAI5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDP21562.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
L3_122_000M1_scaffold_820_6
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6492..7196
DNA (705bp) protein (235aa)
RNA polymerase sigma factor n=2 Tax=Faecalibacterium prausnitzii RepID=D4KBR1_9FIRM
RNA polymerase, sigma 29 subunit, SigE
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L3_122_000M1_scaffold_820_7
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7726..8493
DNA (768bp) protein (256aa)
RNA polymerase sigma factor n=2 Tax=Faecalibacterium prausnitzii RepID=D4KBR0_9FIRM
RNA polymerase, sigma subunit, RpsG/SigG
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
L3_122_000M1_scaffold_820_8
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8672..8920)
DNA (249bp) protein (83aa)
Stage III sporulation protein D n=2 Tax=Faecalibacterium prausnitzii RepID=D4KBQ9_9FIRM
Stage III sporulation protein D.
Stage III sporulation protein D {ECO:0000313|EMBL:CBL02272.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L3_122_000M1_scaffold_820_9
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9217..9783
DNA (567bp) protein (189aa)
Probable proton-coupled thiamine transporter YuaJ n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KBQ8_9FIRM
probable proton-coupled thiamine transporter YuaJ
Probable proton-coupled thiamine transporter YuaJ {ECO:0000313|EMBL:CBL02271.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L3_122_000M1_scaffold_820_10
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10285..11496)
DNA (1212bp) protein (404aa)
carboxynorspermidine decarboxylase (EC:4.1.1.-)
Carboxynorspermidine decarboxylase {ECO:0000313|EMBL:CBL02269.1}; EC=4.1.1.- {ECO:0000313|EMBL:CBL02269.1};; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
Carboxynorspermidine decarboxylase n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KBQ6_9FIRM
L3_122_000M1_scaffold_820_11
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11496..12755)
DNA (1260bp) protein (420aa)
carboxynorspermidine dehydrogenase (EC:1.5.1.7)
Carboxynorspermidine dehydrogenase {ECO:0000313|EMBL:CBL02268.1}; EC=1.5.1.7 {ECO:0000313|EMBL:CBL02268.1};; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
Carboxynorspermidine dehydrogenase n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KBQ5_9FIRM
L3_122_000M1_scaffold_820_12
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12795..13670)
DNA (876bp) protein (292aa)
Agmatinase {ECO:0000313|EMBL:EDP21555.1}; EC=3.5.3.11 {ECO:0000313|EMBL:EDP21555.1};; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
agmatinase (EC:3.5.3.11)
Agmatinase n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SAH7_9FIRM
L3_122_000M1_scaffold_820_13
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13670..14527)
DNA (858bp) protein (286aa)
spermidine synthase (EC:2.5.1.16)
Spermidine synthase n=2 Tax=Faecalibacterium prausnitzii RepID=D4KBQ3_9FIRM
Polyamine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Putrescine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Spermidine synthase {ECO:0000256|HAMAP-Rule:MF_00198}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L3_122_000M1_scaffold_820_14
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14540..16006)
DNA (1467bp) protein (489aa)
arginine decarboxylase (EC:4.1.1.19)
Arginine decarboxylase {ECO:0000313|EMBL:CBL02265.1}; EC=4.1.1.19 {ECO:0000313|EMBL:CBL02265.1};; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
Arginine decarboxylase n=2 Tax=Faecalibacterium prausnitzii RepID=D4KBQ2_9FIRM
L3_122_000M1_scaffold_820_15
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16599..17321
DNA (723bp) protein (241aa)
Response regulator receiver domain protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SAH2_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:EDP21551.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
Response regulator of the LytR/AlgR family
L3_122_000M1_scaffold_820_16
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17339..18655
DNA (1317bp) protein (439aa)
Uncharacterized protein n=2 Tax=Faecalibacterium prausnitzii RepID=A8SAH1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDP21550.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
L3_122_000M1_scaffold_820_17
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18740..18979)
DNA (240bp) protein (80aa)
Uncharacterized protein n=2 Tax=Faecalibacterium prausnitzii RepID=A8SAH0_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL02261.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L3_122_000M1_scaffold_820_18
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18999..19475)
DNA (477bp) protein (159aa)
Beta-galactosidase, beta subunit n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KBP7_9FIRM
Beta-galactosidase, beta subunit
Beta-galactosidase, beta subunit {ECO:0000313|EMBL:CBL02260.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L3_122_000M1_scaffold_820_19
unknown

Not on your lists

19537..20040
DNA (504bp) protein (168aa)

This feature has no annotations

L3_122_000M1_scaffold_820_20
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20137..21291)
DNA (1155bp) protein (385aa)
Site-specific recombinase, phage integrase family n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZNV1_9FIRM
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EFQ05194.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
putative integrase
L3_122_000M1_scaffold_820_21
Streptococcus tigurinus, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(21432..21917)
DNA (486bp) protein (162aa)
Uncharacterized protein n=2 Tax=Streptococcus RepID=M3JJI0_9STRE
Uncharacterized protein {ECO:0000313|EMBL:EMG32937.1}; TaxID=1282664 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus tigurinus AZ_3a.;"
hypothetical protein
L3_122_000M1_scaffold_820_22
unknown

Not on your lists

22196..22300
DNA (105bp) protein (35aa)

This feature has no annotations

L3_122_000M1_scaffold_820_23
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22329..22706)
DNA (378bp) protein (126aa)
DNA-binding helix-turn-helix protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZIF0_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EFQ07056.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
transcriptional regulator
L3_122_000M1_scaffold_820_24
unknown

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22878..23024
DNA (147bp) protein (49aa)

This feature has no annotations

L3_122_000M1_scaffold_820_25
unknown

Not on your lists

comp(23017..23286)
DNA (270bp) protein (90aa)

This feature has no annotations

L3_122_000M1_scaffold_820_26
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23420..23620
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZIF3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ07059.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
L3_122_000M1_scaffold_820_27
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23866..24147
DNA (282bp) protein (94aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K455_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK98298.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_122_000M1_scaffold_820_28
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24198..24569
DNA (372bp) protein (124aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K454_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK98297.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_122_000M1_scaffold_820_29
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24566..26350
DNA (1785bp) protein (595aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZIG2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ07020.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
cell envelope biogenesis protein TolA
L3_122_000M1_scaffold_820_30
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26341..27657
DNA (1317bp) protein (439aa)
Uncharacterized protein n=1 Tax=Dorea sp. 5-2 RepID=R9MU49_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS74221.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
hypothetical protein
Displaying items 1-30 of 65 in total

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