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L3_122_000M1_scaffold_930

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_122_000M1_scaffold_930_1
Bacteroides coprocola, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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179..1795
DNA (1617bp) protein (539aa)
Putative pectate lyase n=1 Tax=Bacteroides coprocola DSM 17136 RepID=B3JN56_9BACE
Putative pectate lyase {ECO:0000313|EMBL:EDU99816.1}; TaxID=470145 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprocola DSM 17136.;"
pectic acid lyase
L3_122_000M1_scaffold_930_2
Bacteroides coprocola, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2003..4201
DNA (2199bp) protein (733aa)
Pectate lyase {ECO:0000313|EMBL:EDU99815.1}; EC=4.2.2.2 {ECO:0000313|EMBL:EDU99815.1};; TaxID=470145 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprocola DSM 17136.;"
Pectate lyase n=1 Tax=Bacteroides coprocola DSM 17136 RepID=B3JN55_9BACE
pectate lyase
L3_122_000M1_scaffold_930_3
Bacteroides coprocola, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4210..5934
DNA (1725bp) protein (575aa)
GDSL-like protein n=1 Tax=Bacteroides coprocola DSM 17136 RepID=B3JN54_9BACE
GDSL-like protein {ECO:0000313|EMBL:EDU99814.1}; TaxID=470145 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprocola DSM 17136.;"
pectinesterase
L3_122_000M1_scaffold_930_4
Bacteroides coprocola, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(6137..7417)
DNA (1281bp) protein (427aa)
TonB-dependent receptor n=1 Tax=Bacteroides coprocola DSM 17136 RepID=B3JN53_9BACE
TonB-dependent receptor {ECO:0000313|EMBL:EDU99813.1}; TaxID=470145 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprocola DSM 17136.;"
TonB family protein
L3_122_000M1_scaffold_930_5
Bacteroides coprocola CAG:162, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7589..9187
DNA (1599bp) protein (533aa)
TrkA C-terminal domain protein n=1 Tax=Bacteroides coprocola CAG:162 RepID=R6C444_9BACE
TrkA C-terminal domain protein {ECO:0000313|EMBL:CDA70260.1}; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprocola CAG:162.;"
putative transport protein
L3_122_000M1_scaffold_930_6
Bacteroides coprocola CAG:162, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9253..10155)
DNA (903bp) protein (301aa)
Transcriptional regulator AraC family n=1 Tax=Bacteroides coprocola CAG:162 RepID=R6CFM3_9BACE
Transcriptional regulator AraC family {ECO:0000313|EMBL:CDA70261.1}; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprocola CAG:162.;"
AraC family transcriptional regulator
L3_122_000M1_scaffold_930_7
Bacteroides coprocola CAG:162, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10321..11475)
DNA (1155bp) protein (385aa)
lactaldehyde reductase (EC:1.1.1.77)
Lactaldehyde reductase n=1 Tax=Bacteroides coprocola CAG:162 RepID=R6CY18_9BACE
Lactaldehyde reductase {ECO:0000313|EMBL:CDA70262.1}; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprocola CAG:162.;"
L3_122_000M1_scaffold_930_8
Bacteroides coprocola, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11489..12298)
DNA (810bp) protein (270aa)
Rhamnulose-1-phosphate aldolase (EC:4.1.2.19)
Putative rhamnulose-1-phosphate aldolase n=1 Tax=Bacteroides coprocola DSM 17136 RepID=B3JN49_9BACE
Putative rhamnulose-1-phosphate aldolase {ECO:0000313|EMBL:EDU99809.1}; TaxID=470145 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprocola DSM 17136.;"
L3_122_000M1_scaffold_930_9
Bacteroides coprocola, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12337..13368)
DNA (1032bp) protein (344aa)
L-rhamnose-proton symport protein (RhaT) n=1 Tax=Bacteroides coprocola DSM 17136 RepID=B3JN48_9BACE
L-rhamnose-proton symport protein (RhaT) {ECO:0000313|EMBL:EDU99808.1}; TaxID=470145 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprocola DSM 17136.;"
rhamnose-proton symporter
L3_122_000M1_scaffold_930_10
Bacteroides coprocola, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13463..14716)
DNA (1254bp) protein (418aa)
L-rhamnose isomerase {ECO:0000256|HAMAP-Rule:MF_00541}; EC=5.3.1.14 {ECO:0000256|HAMAP-Rule:MF_00541};; TaxID=470145 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprocola DSM 17136.;"
L-rhamnose isomerase (EC:5.3.1.14)
L-rhamnose isomerase n=1 Tax=Bacteroides coprocola DSM 17136 RepID=B3JN47_9BACE
L3_122_000M1_scaffold_930_11
Bacteroides coprocola, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14744..16204)
DNA (1461bp) protein (487aa)
Rhamnulokinase {ECO:0000313|EMBL:EDU99806.1}; EC=2.7.1.5 {ECO:0000313|EMBL:EDU99806.1};; TaxID=470145 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprocola DSM 17136.;"
Rhamnulokinase (EC:2.7.1.5)
Rhamnulokinase n=1 Tax=Bacteroides coprocola DSM 17136 RepID=B3JN46_9BACE
L3_122_000M1_scaffold_930_12
Bacteroides coprocola, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16544..17926
DNA (1383bp) protein (461aa)
Putative alpha,alpha-trehalase n=1 Tax=Bacteroides coprocola DSM 17136 RepID=B3JN45_9BACE
Putative alpha,alpha-trehalase {ECO:0000313|EMBL:EDU99805.1}; TaxID=470145 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprocola DSM 17136.;"
glycoside hydrolase family 37
L3_122_000M1_scaffold_930_13
Bacteroides coprocola, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17956..20145
DNA (2190bp) protein (730aa)
Bacterial alpha-L-rhamnosidase n=1 Tax=Bacteroides coprocola DSM 17136 RepID=B3JN43_9BACE
Bacterial alpha-L-rhamnosidase {ECO:0000313|EMBL:EDU99803.1}; TaxID=470145 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprocola DSM 17136.;"
Bacterial alpha-L-rhamnosidase.
L3_122_000M1_scaffold_930_14
Bacteroides coprocola, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20216..21622
DNA (1407bp) protein (469aa)
Uncharacterized protein n=1 Tax=Bacteroides coprocola DSM 17136 RepID=B3JN42_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDU99802.1}; TaxID=470145 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprocola DSM 17136.;"
hypothetical protein
L3_122_000M1_scaffold_930_15
Bacteroides coprocola, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21928..22314)
DNA (387bp) protein (129aa)
Thioesterase family protein n=1 Tax=Bacteroides coprocola DSM 17136 RepID=B3JN41_9BACE
Thioesterase family protein {ECO:0000313|EMBL:EDU99801.1}; TaxID=470145 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprocola DSM 17136.;"
hypothetical protein
L3_122_000M1_scaffold_930_16
Bacteroides coprocola, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22326..23519)
DNA (1194bp) protein (398aa)
Transporter, small conductance mechanosensitive ion channel MscS family protein n=1 Tax=Bacteroides coprocola DSM 17136 RepID=B3JN40_9BACE
Transporter, small conductance mechanosensitive ion channel MscS family protein {ECO:0000313|EMBL:EDU99800.1}; TaxID=470145 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprocola DSM 17136.;"
mechanosensitive ion channel MscS
L3_122_000M1_scaffold_930_17
Bacteroides coprocola CAG:162, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23605..24135
DNA (531bp) protein (177aa)
Antioxidant AhpC/TSA family n=1 Tax=Bacteroides coprocola CAG:162 RepID=R6CY25_9BACE
Antioxidant AhpC/TSA family {ECO:0000313|EMBL:CDA70272.1}; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprocola CAG:162.;"
redoxin domain-containing protein
L3_122_000M1_scaffold_930_18
Bacteroides coprocola, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24255..25142
DNA (888bp) protein (296aa)
Electron transfer flavoprotein domain protein n=1 Tax=Bacteroides coprocola DSM 17136 RepID=B3JN38_9BACE
Electron transfer flavoprotein domain protein {ECO:0000313|EMBL:EDU99798.1}; TaxID=470145 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprocola DSM 17136.;"
electron transfer flavoprotein subunit alpha/beta
L3_122_000M1_scaffold_930_19
Bacteroides coprocola, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25148..26167
DNA (1020bp) protein (340aa)
Electron transfer flavoprotein FAD-binding domain protein n=2 Tax=Bacteroides RepID=B3JN37_9BACE
Electron transfer flavoprotein FAD-binding domain protein {ECO:0000313|EMBL:EDU99797.1}; TaxID=470145 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprocola DSM 17136.;"
electron transfer flavoprotein subunit alpha
L3_122_000M1_scaffold_930_20
Bacteroides coprocola CAG:162, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26167..27873
DNA (1707bp) protein (569aa)
butyryl-CoA dehydrogenase (EC:1.3.8.1)
Acyl-CoA dehydrogenase, C-terminal domain protein n=1 Tax=Bacteroides coprocola DSM 17136 RepID=B3JN36_9BACE
Acyl-CoA dehydrogenase C-terminal domain protein {ECO:0000313|EMBL:CDA70335.1}; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprocola CAG:162.;"
L3_122_000M1_scaffold_930_21
Bacteroides coprocola CAG:162, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27968..28330)
DNA (363bp) protein (121aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=B3JN35_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDA70336.1}; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprocola CAG:162.;"
hypothetical protein
L3_122_000M1_scaffold_930_22
Bacteroides coprocola CAG:162, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28333..28878)
DNA (546bp) protein (182aa)
RNA polymerase sigma factor n=1 Tax=Bacteroides coprocola CAG:162 RepID=R6CY82_9BACE
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprocola CAG:162.;"
RNA polymerase ECF-type sigma factor
L3_122_000M1_scaffold_930_23
Bacteroides coprocola, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29021..29443
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Bacteroides coprocola DSM 17136 RepID=B3JN33_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDU99793.1}; TaxID=470145 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprocola DSM 17136.;"
membrane protein
L3_122_000M1_scaffold_930_24
Bacteroides coprocola, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29635..30036
DNA (402bp) protein (134aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=470145 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprocola DSM 17136.;"
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Bacteroides coprocola DSM 17136 RepID=B3JN32_9BACE
peptidyl-prolyl cis-trans isomerase
L3_122_000M1_scaffold_930_25
Bacteroides coprocola, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30430..31878)
DNA (1449bp) protein (483aa)
Polygalacturonase (Pectinase) n=1 Tax=Bacteroides coprocola DSM 17136 RepID=B3JN31_9BACE
Polygalacturonase (Pectinase) {ECO:0000313|EMBL:EDU99791.1}; TaxID=470145 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprocola DSM 17136.;"
glycoside hydrolase family protein
L3_122_000M1_scaffold_930_26
Bacteroides coprocola CAG:162, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32215..32340
DNA (126bp) protein (42aa)
Uncharacterized protein n=1 Tax=Bacteroides coprocola CAG:162 RepID=R6CFT4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDA70341.1}; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprocola CAG:162.;"
Displaying 26 items

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