ggKbase home page

L3_122_000M1_scaffold_958

Search features with annotation key words

Displaying items 1-30 of 128 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_122_000M1_scaffold_958_1
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27..2756)
DNA (2730bp) protein (910aa)
TonB-linked outer membrane protein, SusC/RagA family n=4 Tax=Bacteroides RepID=D2EY86_9BACE
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:EFA20622.1}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
TonB-dependent receptor plug
L3_122_000M1_scaffold_958_2
Bacteroides uniformis CAG:3, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2876..6886)
DNA (4011bp) protein (1337aa)
Response regulator receiver domain protein n=1 Tax=Bacteroides uniformis CAG:3 RepID=R7ES01_9BACE
Response regulator receiver domain protein {ECO:0000313|EMBL:CDE04242.1}; TaxID=1263055 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides uniformis CAG:3.;"
histidine kinase
L3_122_000M1_scaffold_958_3
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7131..9128
DNA (1998bp) protein (666aa)
Glycosyl hydrolase family 2, sugar binding domain protein n=3 Tax=Bacteroides uniformis RepID=A7V879_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EIY76150.1}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
putative beta-galactosidase
L3_122_000M1_scaffold_958_4
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9389..10228)
DNA (840bp) protein (280aa)
Uncharacterized protein n=2 Tax=Bacteroides uniformis RepID=I9IR84_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EIY76149.1}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
Beta-xylosidase
L3_122_000M1_scaffold_958_5
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10367..11893
DNA (1527bp) protein (509aa)
MutS domain V protein n=2 Tax=Bacteroides uniformis RepID=A7V876_BACUN
MutS domain V protein {ECO:0000313|EMBL:EDO52182.1}; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
DNA mismatch repair protein MutS
L3_122_000M1_scaffold_958_6
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11973..12734)
DNA (762bp) protein (254aa)
Transcriptional regulator, DeoR family n=4 Tax=Bacteroides uniformis RepID=A7V875_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EIY76147.1}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
sugar metabolism transcriptional regulator
L3_122_000M1_scaffold_958_7
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12742..13356)
DNA (615bp) protein (205aa)
3,4-dihydroxy-2-butanone 4-phosphate synthase {ECO:0000256|RuleBase:RU003843, ECO:0000256|SAAS:SAAS00038056}; Short=DHBP synthase {ECO:0000256|RuleBase:RU003843};; EC=4.1.99.12 {ECO:0000256|RuleBase:RU003843, ECO:0000256|SAAS:SAAS00037921};; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
3,4-dihydroxy-2-butanone 4-phosphate synthase n=2 Tax=Bacteroides uniformis RepID=A7V874_BACUN
ribB; 3,4-dihydroxy-2-butanone 4-phosphate synthase
L3_122_000M1_scaffold_958_8
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13611..14444
DNA (834bp) protein (278aa)
Transketolase, thiamine diphosphate binding domain protein n=4 Tax=Bacteroides uniformis RepID=A7V872_BACUN
Transketolase {ECO:0000313|EMBL:EOS10881.1}; TaxID=1235787 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis dnLKV2.;"
transketolase
L3_122_000M1_scaffold_958_9
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14446..15369
DNA (924bp) protein (308aa)
Uncharacterized protein n=4 Tax=Bacteroides uniformis RepID=I9IR80_BACUN
Transketolase {ECO:0000313|EMBL:EOS10882.1}; TaxID=1235787 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis dnLKV2.;"
transketolase
L3_122_000M1_scaffold_958_10
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15418..16896
DNA (1479bp) protein (493aa)
Glycerol kinase n=4 Tax=Bacteroides uniformis RepID=I8ZMD5_BACUN
Glycerol kinase {ECO:0000313|EMBL:EOS10883.1}; TaxID=1235787 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis dnLKV2.;"
carbohydrate kinase
L3_122_000M1_scaffold_958_11
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16935..18359
DNA (1425bp) protein (475aa)
L-fucose isomerase domain protein n=4 Tax=Bacteroides uniformis RepID=A7V869_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EOS10884.1}; TaxID=1235787 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis dnLKV2.;"
hypothetical protein
L3_122_000M1_scaffold_958_12
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18395..19411
DNA (1017bp) protein (339aa)
Uncharacterized protein n=4 Tax=Bacteroides uniformis RepID=I9IR96_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EIY76141.1}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
multidrug DMT transporter permease
L3_122_000M1_scaffold_958_13
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19486..19689
DNA (204bp) protein (68aa)
TonB-linked outer membrane protein, SusC/RagA family n=2 Tax=Bacteroides uniformis RepID=A7V867_BACUN
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:EDO52173.1}; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
hypothetical protein
L3_122_000M1_scaffold_958_14
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19779..22409
DNA (2631bp) protein (877aa)
TonB-linked outer membrane protein, SusC/RagA family n=1 Tax=Bacteroides sp. D20 RepID=D2EY98_9BACE
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:EFA20634.1}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
TonB-dependent receptor plug
L3_122_000M1_scaffold_958_15
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22430..23977
DNA (1548bp) protein (516aa)
SusD family protein n=2 Tax=Bacteroides RepID=D2EY99_9BACE
SusD family protein {ECO:0000313|EMBL:EFA20635.1}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
hypothetical protein
L3_122_000M1_scaffold_958_16
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23999..25540
DNA (1542bp) protein (514aa)
Uncharacterized protein n=2 Tax=Bacteroides uniformis RepID=A7UY99_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EDO56128.1}; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
protein of unknown function DUF1593
L3_122_000M1_scaffold_958_17
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25576..26772
DNA (1197bp) protein (399aa)
Isoamylase N-terminal domain protein n=4 Tax=Bacteroides RepID=A7UY98_BACUN
Isoamylase N-terminal domain protein {ECO:0000313|EMBL:EFA20637.1}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
glycosylhydrolase
L3_122_000M1_scaffold_958_18
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26786..29122
DNA (2337bp) protein (779aa)
Beta-glucosidase (EC:3.2.1.21)
Glycosyl hydrolase family 3 N-terminal domain protein n=3 Tax=Bacteroides RepID=A7UY97_BACUN
Beta-glucosidase {ECO:0000313|EMBL:EOS10890.1}; TaxID=1235787 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis dnLKV2.;"
L3_122_000M1_scaffold_958_19
Bacteroides uniformis CAG:3, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


29361..30902
DNA (1542bp) protein (514aa)
Glycine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00006545}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00015978};; Glycyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00253}; TaxID=1263055 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides uniformis CAG:3.;"
glycyl-tRNA synthetase (EC:6.1.1.14)
Glycine--tRNA ligase n=5 Tax=Bacteroides RepID=A7UY95_BACUN
L3_122_000M1_scaffold_958_20
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30971..31615
DNA (645bp) protein (215aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915, ECO:0000256|RuleBase:RU004231}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
Peptidyl-prolyl cis-trans isomerase n=5 Tax=Bacteroides RepID=A7UY94_BACUN
peptidylprolyl isomerase FKBP-type
L3_122_000M1_scaffold_958_21
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31760..33655)
DNA (1896bp) protein (632aa)
Uncharacterized protein n=1 Tax=Bacteroides uniformis dnLKV2 RepID=R9I3P0_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EOS10893.1}; TaxID=1235787 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis dnLKV2.;"
beta-lactamase
L3_122_000M1_scaffold_958_22
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33684..34493)
DNA (810bp) protein (270aa)
N-acetylmuramic acid 6-phosphate etherase {ECO:0000256|HAMAP-Rule:MF_00068, ECO:0000256|SAAS:SAAS00085795}; Short=MurNAc-6-P etherase {ECO:0000256|HAMAP-Rule:MF_00068};; EC=4.2.1.126 {ECO:0000256|HAMAP-Rule:MF_00068, ECO:0000256|SAAS:SAAS00085795};; N-acetylmuramic acid 6-phosphate hydrolase {ECO:0000256|HAMAP-Rule:MF_00068}; N-acetylmuramic acid 6-phosphate lyase {ECO:0000256|HAMAP-Rule:MF_00068}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
N-acetylmuramic acid 6-phosphate etherase n=7 Tax=Bacteroides RepID=A7UY92_BACUN
sugar isomerase (SIS)
L3_122_000M1_scaffold_958_23
Bacteroides uniformis CAG:3, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34547..35386)
DNA (840bp) protein (280aa)
BadF/BadG/BcrA/BcrD ATPase family protein n=4 Tax=Bacteroides RepID=A7UY91_BACUN
Uncharacterized protein {ECO:0000313|EMBL:CDE04212.1}; TaxID=1263055 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides uniformis CAG:3.;"
hypothetical protein
L3_122_000M1_scaffold_958_24
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35500..36684)
DNA (1185bp) protein (395aa)
Uncharacterized protein n=1 Tax=Bacteroides uniformis dnLKV2 RepID=R9I442_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EOS10896.1}; TaxID=1235787 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis dnLKV2.;"
hypothetical protein
L3_122_000M1_scaffold_958_25
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36718..39678)
DNA (2961bp) protein (987aa)
FAD linked oxidase, C-terminal domain protein n=2 Tax=root RepID=A7UY89_BACUN
FAD linked oxidase, C-terminal domain protein {ECO:0000313|EMBL:EDO56118.1}; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
putative FAD-binding oxidoreductase
L3_122_000M1_scaffold_958_26
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(39854..41095)
DNA (1242bp) protein (414aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=I8ZMF1_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EOS10898.1}; TaxID=1235787 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis dnLKV2.;"
hypothetical protein
L3_122_000M1_scaffold_958_27
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(41144..42466)
DNA (1323bp) protein (441aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=A7UY87_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EIY76636.1}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
arabinose efflux permease family protein
L3_122_000M1_scaffold_958_28
Bacteroides uniformis CAG:3, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(42494..43813)
DNA (1320bp) protein (440aa)
SpoIID/LytB domain-containing protein n=5 Tax=Bacteroides RepID=E5V7R3_9BACE
SpoIID/LytB domain-containing protein {ECO:0000313|EMBL:CDE04206.1}; TaxID=1263055 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides uniformis CAG:3.;"
hypothetical protein
L3_122_000M1_scaffold_958_29
Bacteroides uniformis CAG:3, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(43855..44787)
DNA (933bp) protein (311aa)
Glycoside transferase family 2 protein n=1 Tax=Bacteroides uniformis CAG:3 RepID=R7ENH2_9BACE
Glycoside transferase family 2 protein {ECO:0000313|EMBL:CDE04205.1}; TaxID=1263055 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides uniformis CAG:3.;"
SpoIID/LytB domain protein
L3_122_000M1_scaffold_958_30
Bacteroides uniformis CAG:3, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(44824..46284)
DNA (1461bp) protein (487aa)
Uncharacterized protein n=1 Tax=Bacteroides uniformis CAG:3 RepID=R7EMT0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDE04204.1}; TaxID=1263055 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides uniformis CAG:3.;"
glycosyl transferase 2
Displaying items 1-30 of 128 in total

View Taxonomy