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L3_122_000M1_scaffold_1025

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_122_000M1_scaffold_1025_1
Sanguibacteroides justesenii, Sanguibacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2..268
DNA (267bp) protein (89aa)
hypothetical protein n=1 Tax=Butyricimonas synergistica RepID=UPI00037B6BDE
Nitroreductase {ECO:0000313|EMBL:KIO45999.1}; TaxID=1547597 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Sanguibacteroides.;" source="Sanguibacteroides justesenii.;"
Predicted oxidoreductase related to nitroreductase
L3_122_000M1_scaffold_1025_2
Bacteroides helcogenes, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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318..698
DNA (381bp) protein (127aa)
TonB-dependent receptor plug n=1 Tax=Bacteroides helcogenes (strain ATCC 35417 / DSM 20613 / JCM 6297 / P 36-108) RepID=E6SR56_BACT6
TonB-dependent receptor plug
TonB-dependent receptor plug {ECO:0000313|EMBL:ADV42060.1}; Flags: Precursor;; TaxID=693979 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides helcogenes (strain ATCC 35417 / DSM 20613 / JCM 6297 / P; 36-108).;"
L3_122_000M1_scaffold_1025_3
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

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692..946
DNA (255bp) protein (85aa)
hypothetical protein n=1 Tax=Butyricimonas synergistica RepID=UPI00035C6E9E
hypothetical protein
Tax=GWE2_Bacteroidetes_40_63_curated
L3_122_000M1_scaffold_1025_4
Geofilum rubicundum, Geofilum, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1026..1172
DNA (147bp) protein (49aa)
hypothetical protein n=1 Tax=Butyricimonas synergistica RepID=UPI00035C6E9E
TonB-dependent receptor {ECO:0000313|EMBL:GAO31059.1}; TaxID=1236989 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Geofilum.;" source="Geofilum rubicundum JCM 15548.;"
hypothetical protein
L3_122_000M1_scaffold_1025_5
Prevotella melaninogenica, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1515..3941)
DNA (2427bp) protein (809aa)
Uncharacterized protein n=1 Tax=Bacteroides salanitronis (strain DSM 18170 / JCM 13567 / BL78) RepID=F0R7M2_BACSH
Uncharacterized protein {ECO:0000313|EMBL:KGF52528.1}; TaxID=1401073 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella melaninogenica DNF00666.;"
hypothetical protein
L3_122_000M1_scaffold_1025_6
Prevotella sp. oral taxon 472, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3928..5829)
DNA (1902bp) protein (634aa)
Uncharacterized protein n=1 Tax=Prevotella sp. oral taxon 472 str. F0295 RepID=C9Q187_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEX51593.1}; TaxID=619693 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella sp. oral taxon 472 str. F0295.;"
hypothetical protein
L3_122_000M1_scaffold_1025_7
Prevotella sp. CAG:279, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(5911..6327)
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Bacteroides salyersiae WAL 10018 = DSM 18765 = JCM 12988 RepID=R0J947_9BACE
Exonuclease {ECO:0000313|EMBL:CDE41275.1}; TaxID=1262924 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:279.;"
Exonuclease RNase T and DNA polymerase III
L3_122_000M1_scaffold_1025_8
Bacteroides coprocola CAG:162, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(6330..7292)
DNA (963bp) protein (321aa)
Uncharacterized protein n=1 Tax=Bacteroides salyersiae WAL 10018 = DSM 18765 = JCM 12988 RepID=R0IYT1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDA70643.1}; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprocola CAG:162.;"
hypothetical protein
L3_122_000M1_scaffold_1025_9
Prevotella sp. CAG:279, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(7308..8561)
DNA (1254bp) protein (418aa)
RNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=1262924 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:279.;"
RNA-splicing ligase RtcB n=1 Tax=Prevotella sp. CAG:279 RepID=R7HPR7_9BACT
hypothetical protein
L3_122_000M1_scaffold_1025_10
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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9336..9941
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Bacteroides salyersiae WAL 10018 = DSM 18765 = JCM 12988 RepID=R0HJN5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOS20206.1}; TaxID=1235789 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii dnLKV18.;"
metallophosphoesterase
L3_122_000M1_scaffold_1025_11
Bacteroides coprocola CAG:162, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10132..11835
DNA (1704bp) protein (568aa)
Uncharacterized protein n=1 Tax=Bacteroides salyersiae WAL 10018 = DSM 18765 = JCM 12988 RepID=R0J943_9BACE
ATPase AAA family {ECO:0000313|EMBL:CDA70644.1}; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprocola CAG:162.;"
putative AAA family ATPase
L3_122_000M1_scaffold_1025_12
unknown

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11876..12283
DNA (408bp) protein (136aa)

This feature has no annotations

L3_122_000M1_scaffold_1025_13
unknown

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12650..12997
DNA (348bp) protein (116aa)
TonB-dependent receptor n=1 Tax=Aquimarina agarilytica RepID=UPI000288A115
L3_122_000M1_scaffold_1025_14
Sanguibacteroides justesenii, Sanguibacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13098..14798)
DNA (1701bp) protein (567aa)
glutamate formiminotransferase (EC:2.1.2.5)
glutamate formimidoyltransferase n=1 Tax=Butyricimonas synergistica RepID=UPI0003639264
Formimidoyltransferase-cyclodeaminase {ECO:0000313|EMBL:KIO45618.1}; TaxID=1547597 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Sanguibacteroides.;" source="Sanguibacteroides justesenii.;"
L3_122_000M1_scaffold_1025_15
Sanguibacteroides justesenii, Sanguibacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14950..16203)
DNA (1254bp) protein (418aa)
Imidazolonepropionase {ECO:0000256|HAMAP-Rule:MF_00372, ECO:0000256|SAAS:SAAS00083112}; EC=3.5.2.7 {ECO:0000256|HAMAP-Rule:MF_00372, ECO:0000256|SAAS:SAAS00083112};; Imidazolone-5-propionate hydrolase {ECO:0000256|HAMAP-Rule:MF_00372}; TaxID=1547597 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Sanguibacteroides.;" source="Sanguibacteroides justesenii.;"
imidazolonepropionase (EC:3.5.2.7)
imidazolonepropionase n=1 Tax=Butyricimonas synergistica RepID=UPI000364AF39
L3_122_000M1_scaffold_1025_16
Sanguibacteroides justesenii, Sanguibacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16286..17710)
DNA (1425bp) protein (475aa)
hypothetical protein n=1 Tax=Butyricimonas synergistica RepID=UPI00037CDAAA
Rod shape-determining protein RodA {ECO:0000313|EMBL:KIO45616.1}; TaxID=1547597 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Sanguibacteroides.;" source="Sanguibacteroides justesenii.;"
rod shape-determining protein RodA
L3_122_000M1_scaffold_1025_17
Sanguibacteroides justesenii, Sanguibacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17703..19544)
DNA (1842bp) protein (614aa)
penicillin-binding protein 2 (EC:2.4.1.129)
hypothetical protein n=1 Tax=Butyricimonas synergistica RepID=UPI0003691890
Penicillin-binding protein {ECO:0000313|EMBL:KIO45615.1}; TaxID=1547597 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Sanguibacteroides.;" source="Sanguibacteroides justesenii.;"
L3_122_000M1_scaffold_1025_18
Sanguibacteroides justesenii, Sanguibacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19579..20085)
DNA (507bp) protein (169aa)
hypothetical protein n=1 Tax=Butyricimonas synergistica RepID=UPI000368001D
Rod shape-determining protein MreD {ECO:0000313|EMBL:KIO45614.1}; TaxID=1547597 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Sanguibacteroides.;" source="Sanguibacteroides justesenii.;"
rod shape-determining protein MreD
L3_122_000M1_scaffold_1025_19
Sanguibacteroides justesenii, Sanguibacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20078..20905)
DNA (828bp) protein (276aa)
hypothetical protein n=1 Tax=Butyricimonas synergistica RepID=UPI00037DA83B
Rod shape-determining protein MreC {ECO:0000313|EMBL:KIO45613.1}; TaxID=1547597 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Sanguibacteroides.;" source="Sanguibacteroides justesenii.;"
rod shape-determining protein MreC
L3_122_000M1_scaffold_1025_20
Sanguibacteroides justesenii, Sanguibacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20910..21932)
DNA (1023bp) protein (341aa)
rod shape-determining protein MreB n=1 Tax=Butyricimonas synergistica RepID=UPI00036F39B4
Rod shape-determining protein MreB {ECO:0000313|EMBL:KIO45612.1}; TaxID=1547597 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Sanguibacteroides.;" source="Sanguibacteroides justesenii.;"
cell shape determining protein, MreB/Mrl family
L3_122_000M1_scaffold_1025_21
Sanguibacteroides justesenii, Sanguibacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21939..23477)
DNA (1539bp) protein (513aa)
Bifunctional purine biosynthesis protein purH (EC:2.1.2.3)
IMP cyclohydrolase n=1 Tax=Butyricimonas synergistica RepID=UPI00036B1FBE
Bifunctional purine biosynthesis protein PurH {ECO:0000256|HAMAP-Rule:MF_00139, ECO:0000256|SAAS:SAAS00010516}; TaxID=1547597 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Sanguibacteroides.;" source="Sanguibacteroides justesenii.;"
L3_122_000M1_scaffold_1025_22
unknown

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23675..24148
DNA (474bp) protein (158aa)
hypothetical protein n=1 Tax=Butyricimonas synergistica RepID=UPI00037032D0
L3_122_000M1_scaffold_1025_23
Sanguibacteroides justesenii, Sanguibacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24145..25422)
DNA (1278bp) protein (426aa)
hypothetical protein n=1 Tax=Butyricimonas synergistica RepID=UPI00035F223A
Uncharacterized protein {ECO:0000313|EMBL:KIO45609.1}; TaxID=1547597 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Sanguibacteroides.;" source="Sanguibacteroides justesenii.;"
hypothetical protein
L3_122_000M1_scaffold_1025_24
Sanguibacteroides justesenii, Sanguibacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25415..25948)
DNA (534bp) protein (178aa)
hypothetical protein n=1 Tax=Butyricimonas synergistica RepID=UPI00035E2288
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:KIO45608.1}; TaxID=1547597 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Sanguibacteroides.;" source="Sanguibacteroides justesenii.;"
RNA polymerase, sigma-24 subunit, ECF subfamily
L3_122_000M1_scaffold_1025_25
unknown

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25966..26145
DNA (180bp) protein (60aa)

This feature has no annotations

L3_122_000M1_scaffold_1025_26
unknown

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26142..26891
DNA (750bp) protein (250aa)
hypothetical protein n=1 Tax=Butyricimonas synergistica RepID=UPI00035D071D
L3_122_000M1_scaffold_1025_27
Sanguibacteroides justesenii, Sanguibacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27059..28837)
DNA (1779bp) protein (593aa)
hypothetical protein n=1 Tax=Butyricimonas synergistica RepID=UPI0003820C3B
Peptidase M24 {ECO:0000313|EMBL:KIO45606.1}; TaxID=1547597 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Sanguibacteroides.;" source="Sanguibacteroides justesenii.;"
peptidase M24
L3_122_000M1_scaffold_1025_28
Odoribacter splanchnicus, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29490..29924
DNA (435bp) protein (145aa)
hypothetical protein n=1 Tax=Butyricimonas synergistica RepID=UPI000361D7C2
helix-turn-helix domain-containing protein
Helix-turn-helix domain protein {ECO:0000313|EMBL:ADY31799.1}; TaxID=709991 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter.;" source="Odoribacter splanchnicus (strain ATCC 29572 / DSM 20712 / JCM 15291 /; NCTC 10825 / 1651/6) (Bacteroides splanchnicus).;"
Displaying 28 items

View Taxonomy