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L3_122_000M1_scaffold_1349

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_122_000M1_scaffold_1349_1
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..491)
DNA (489bp) protein (163aa)
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037468}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037533};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
nadF; NAD+ kinase (EC:2.7.1.23)
Probable inorganic polyphosphate/ATP-NAD kinase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TB75_9FIRM
L3_122_000M1_scaffold_1349_2
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(511..1317)
DNA (807bp) protein (269aa)
Hemolysin A n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T0J0_9FIRM
hemolysin TlyA family protein
Hemolysin TlyA family protein {ECO:0000313|EMBL:CCO05058.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_122_000M1_scaffold_1349_3
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1310..3166)
DNA (1857bp) protein (619aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
dxs1; 1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7)
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U848_9FIRM
L3_122_000M1_scaffold_1349_4
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3192..4085)
DNA (894bp) protein (298aa)
crtE; geranylgeranyl pyrophosphate synthase (EC:2.5.1.29)
Polyprenyl synthetase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TGF7_9FIRM
Polyprenyl synthetase {ECO:0000313|EMBL:CDC66951.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L3_122_000M1_scaffold_1349_5
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4078..4266)
DNA (189bp) protein (63aa)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclease VII small subunit {ECO:0000256|HAMAP-Rule:MF_00337}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Exodeoxyribonuclease 7 small subunit n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T413_9FIRM
xseB; Exodeoxyribonuclease VII small subunit
L3_122_000M1_scaffold_1349_6
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4280..5473)
DNA (1194bp) protein (398aa)
xseA; Exodeoxyribonuclease VII large subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclease VII large subunit {ECO:0000256|HAMAP-Rule:MF_00378}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Exodeoxyribonuclease 7 large subunit n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TB70_9FIRM
L3_122_000M1_scaffold_1349_7
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5470..6411)
DNA (942bp) protein (314aa)
probableO-sialoglycoprotein endopeptidase (EC:3.4.24.57)
Peptidase M22 glycoprotease n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T0I4_9FIRM
Peptidase M22 glycoprotease {ECO:0000313|EMBL:CDC66948.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L3_122_000M1_scaffold_1349_8
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6408..6821)
DNA (414bp) protein (138aa)
N utilization substance protein B homolog n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U843_9FIRM
nusB; transcription antitermination factor NusB
N utilization substance protein B homolog {ECO:0000256|HAMAP-Rule:MF_00073, ECO:0000256|SAAS:SAAS00057003}; Short=Protein NusB {ECO:0000256|HAMAP-Rule:MF_00073};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_122_000M1_scaffold_1349_9
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6857..7213)
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TGF1_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO05051.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_122_000M1_scaffold_1349_10
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7340..7882)
DNA (543bp) protein (181aa)
Stage III sporulation protein AH n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T406_9FIRM
spoIIIAH; Stage III sporulation protein AH
Stage III sporulation protein AH {ECO:0000313|EMBL:CCO05050.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_122_000M1_scaffold_1349_11
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7901..8452)
DNA (552bp) protein (184aa)
Stage III sporulation protein AG n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TB64_9FIRM
Stage III sporulation protein AG {ECO:0000313|EMBL:CDC66944.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
spoIIIAG; Stage III sporulation protein AG
L3_122_000M1_scaffold_1349_12
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8456..8926)
DNA (471bp) protein (157aa)
Conserved domain protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T0H9_9FIRM
spoIIIAF; stage III sporulation protein SpoAF
Stage III sporulation protein SpoAF {ECO:0000313|EMBL:CCO05048.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_122_000M1_scaffold_1349_13
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8928..10067)
DNA (1140bp) protein (380aa)
Putative stage III sporulation protein AE n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U837_9FIRM
spoIIIAE; Stage III sporulation protein AE
Stage III sporulation protein AE {ECO:0000313|EMBL:CCO05047.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_122_000M1_scaffold_1349_14
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10077..10463)
DNA (387bp) protein (129aa)
Putative stage III sporulation protein AD n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TGE7_9FIRM
spoIIIAD; Stage III sporulation protein AD
Stage III sporulation protein AD {ECO:0000313|EMBL:CCO05046.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_122_000M1_scaffold_1349_15
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10463..10660)
DNA (198bp) protein (66aa)
Stage III sporulation protein AC n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T403_9FIRM
spoIIIAC; Stage III sporulation protein AC
Stage III sporulation protein AC {ECO:0000313|EMBL:CDC66940.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L3_122_000M1_scaffold_1349_16
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10701..11189)
DNA (489bp) protein (163aa)
Stage III sporulation protein AB SpoIIIAB n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TB59_9FIRM
spoIIIAB; stage III sporulation protein SpoAB
Stage III sporulation protein SpoAB {ECO:0000313|EMBL:CCO05044.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_122_000M1_scaffold_1349_17
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11191..12126)
DNA (936bp) protein (312aa)
AAA ATPase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T0H3_9FIRM
spoIIIAA; Stage III sporulation protein AA
Stage III sporulation protein AA {ECO:0000313|EMBL:CCO05043.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_122_000M1_scaffold_1349_18
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12309..13316
DNA (1008bp) protein (336aa)
ATPase of unknown function (EC:3.6.3.-)
ATPase associated with various cellular activities AAA_3 n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U832_9FIRM
ATPase associated with various cellular activities AAA_3 {ECO:0000313|EMBL:CDC66937.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L3_122_000M1_scaffold_1349_19
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13328..14521
DNA (1194bp) protein (398aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TGE2_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO05041.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_122_000M1_scaffold_1349_20
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14532..17213
DNA (2682bp) protein (894aa)
Transglutaminase-like protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T3Z8_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO05040.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_122_000M1_scaffold_1349_21
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17364..18326
DNA (963bp) protein (321aa)
TRAP transporter solute receptor TAXI family n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TB54_9FIRM
TRAP transporter solute receptor, TAXI family
TRAP transporter solute receptor, TAXI family {ECO:0000313|EMBL:CCO05039.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_122_000M1_scaffold_1349_22
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18323..19516
DNA (1194bp) protein (398aa)
Sodium/glutamate symporter n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T0G8_9FIRM
Sodium/glutamate symporter {ECO:0000313|EMBL:CDC66933.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
gltS; Sodium/glutamate symporter
L3_122_000M1_scaffold_1349_23
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19531..19710
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U819_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO05037.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_122_000M1_scaffold_1349_24
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19752..22310)
DNA (2559bp) protein (853aa)
Small GTP-binding protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TGD6_9FIRM
Small GTP-binding protein {ECO:0000313|EMBL:CDC66931.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
tetP; tetracycline resistance protein TetP
L3_122_000M1_scaffold_1349_25
unknown

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comp(22327..22437)
DNA (111bp) protein (37aa)

This feature has no annotations

L3_122_000M1_scaffold_1349_26
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22447..23178)
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:122 RepID=R5RT51_9CLOT
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO05035.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_122_000M1_scaffold_1349_27
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23198..23662)
DNA (465bp) protein (155aa)
NUDIX hydrolase n=1 Tax=Clostridium sp. CAG:122 RepID=R5RMC8_9CLOT
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO05034.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_122_000M1_scaffold_1349_28
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24038..24277)
DNA (240bp) protein (80aa)
MATE efflux family protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MMY5_9FIRM
multidrug resistance protein, MATE family, drug/sodium antiporter
Multidrug resistance protein, MATE family,drug/sodium antiporter {ECO:0000313|EMBL:CCO05033.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Displaying 28 items

View Taxonomy