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L3_122_000M1_scaffold_1461

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_122_000M1_scaffold_1461_1
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(85..333)
DNA (249bp) protein (83aa)
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO04342.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_122_000M1_scaffold_1461_2
unknown

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comp(2595..2969)
DNA (375bp) protein (125aa)

This feature has no annotations

L3_122_000M1_scaffold_1461_3
unknown

Not on your lists

3014..3886
DNA (873bp) protein (291aa)

This feature has no annotations

L3_122_000M1_scaffold_1461_4
Megasphaera sp. BV3C16-1, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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4003..4422
DNA (420bp) protein (140aa)
Protein F-like protein n=1 Tax=Megasphaera sp. BV3C16-1 RepID=U7UPS0_9FIRM
Protein F-like protein {ECO:0000313|EMBL:ERT61271.1}; TaxID=1111454 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. BV3C16-1.;"
phage head morphogenesis protein, SPP1 gp7 family
L3_122_000M1_scaffold_1461_5
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4428..4607
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=M4Y177_CLOSH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOQ39629.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
L3_122_000M1_scaffold_1461_6
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4971..5804
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TB36_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC66914.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein
L3_122_000M1_scaffold_1461_7
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5911..6147)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T0E7_9FIRM
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO04347.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_122_000M1_scaffold_1461_8
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6530..7306)
DNA (777bp) protein (259aa)
CobQ/CobB/MinD/ParA nucleotide binding domain protein n=1 Tax=Ruminococcus albus 8 RepID=E9S8D2_RUMAL
CobQ/CobB/MinD/ParA nucleotide binding domain protein {ECO:0000313|EMBL:EGC04459.1}; TaxID=246199 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus 8.;"
cobyrinic acid ac-diamide synthase
L3_122_000M1_scaffold_1461_9
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7364..8935)
DNA (1572bp) protein (524aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:579 RepID=R6D208_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCO04348.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
conserved hypothetical protein
L3_122_000M1_scaffold_1461_10
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9041..9523)
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7L3C5_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO04349.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_122_000M1_scaffold_1461_11
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9520..9804)
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) RepID=C4Z3R8_EUBE2
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO04350.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_122_000M1_scaffold_1461_12
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10184..10960
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U7Z6_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO04351.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_122_000M1_scaffold_1461_13
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11078..11200
DNA (123bp) protein (41aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO04353.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_122_000M1_scaffold_1461_14
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11178..11864
DNA (687bp) protein (229aa)
Ser/Thr phosphatase family protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TGB8_9FIRM
putative phosphatase
Putative phosphatase {ECO:0000313|EMBL:CCO04354.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_122_000M1_scaffold_1461_15
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12055..13536
DNA (1482bp) protein (494aa)
ImpB/MucB/SamB family protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T3X5_9FIRM
ImpB/MucB/SamB family protein {ECO:0000313|EMBL:CDC66910.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
DNA-repair protein
L3_122_000M1_scaffold_1461_16
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13552..13977
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TB31_9FIRM
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO04356.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_122_000M1_scaffold_1461_17
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14572..14700
DNA (129bp) protein (43aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U2I4_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO04358.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_122_000M1_scaffold_1461_18
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14732..16060
DNA (1329bp) protein (443aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:254 RepID=R5V5E3_9FIRM
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO04359.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_122_000M1_scaffold_1461_19
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16057..16335)
DNA (279bp) protein (93aa)
putative transposase
Putative transposase {ECO:0000313|EMBL:CCO04301.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_122_000M1_scaffold_1461_20
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16375..18309)
DNA (1935bp) protein (645aa)
manA; mannan endo-1,4-beta-mannosidase (Glycoside Hydrolase Family 5 protein / Carbohydrate-Binding Module Family 13 protein) (EC:3.2.1.78)
Mannan endo-1,4-beta-mannosidase (Glycoside Hydrolase Family 5 protein / Carbohydrate-Binding Module Family 13 protein) {ECO:0000313|EMBL:CCO04360.1}; EC=3.2.1.78 {ECO:0000313|EMBL:CCO04360.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Cellulase (Glycosyl hydrolase family 5) n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U2I7_9FIRM
L3_122_000M1_scaffold_1461_21
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18848..21076
DNA (2229bp) protein (743aa)
Fibronectin type III domain protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SUY8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCO04361.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
hypothetical protein
L3_122_000M1_scaffold_1461_22
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21387..22730
DNA (1344bp) protein (448aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T5K8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC65009.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein predicted by Glimmer/Critica
L3_122_000M1_scaffold_1461_23
unknown

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22925..23059
DNA (135bp) protein (45aa)

This feature has no annotations

Displaying 23 items

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