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L3_122_000M1_scaffold_586

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_122_000M1_scaffold_586_1
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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168..1001
DNA (834bp) protein (278aa)
Putative ribosomal RNA large subunit methyltransferase A n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U6X4_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO05953.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_122_000M1_scaffold_586_2
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1005..1973
DNA (969bp) protein (323aa)
Glycoside Hydrolase Family 113 protein (putative beta-1,4-mannanase) (EC:3.2.1.78)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TF88_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC66511.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L3_122_000M1_scaffold_586_3
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2086..2520)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T2W6_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO05951.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_122_000M1_scaffold_586_4
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2684..3928)
DNA (1245bp) protein (415aa)
ahcY; Adenosylhomocysteinase (EC:3.3.1.1)
Adenosylhomocysteinase {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548}; EC=3.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548};; S-adenosyl-L-homocysteine hydrolase {ECO:0000256|HAMAP-Rule:MF_00563}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
Adenosylhomocysteinase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TA06_9FIRM
L3_122_000M1_scaffold_586_5
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4364..5731
DNA (1368bp) protein (456aa)
Magnesium transporter n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SZE4_9FIRM
mgtE2; Magnesium transporter
Magnesium transporter MgtE {ECO:0000256|RuleBase:RU362011}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_122_000M1_scaffold_586_6
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5837..7216
DNA (1380bp) protein (460aa)
Pyridine nucleotide-disulfide oxidoreductase family protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U6W9_9FIRM
hypothetical protein
Pyridine nucleotide-disulfide oxidoreductase family protein {ECO:0000313|EMBL:CDC66507.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L3_122_000M1_scaffold_586_7
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7277..7888)
DNA (612bp) protein (204aa)
Cytidylate kinase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TF84_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO05947.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_122_000M1_scaffold_586_8
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7901..8611)
DNA (711bp) protein (237aa)
livF; branched-chain amino acid ABC ATPase component (EC:3.6.3.-)
Branched-chain amino acid ABC ATPase component {ECO:0000313|EMBL:CCO05946.1}; EC=3.6.3.- {ECO:0000313|EMBL:CCO05946.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Amino acid/amide ABC transporter ATP-binding protein 2 HAAT family (TC 3.A.1.4.-) n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T2V7_9FIRM
L3_122_000M1_scaffold_586_9
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8625..9383)
DNA (759bp) protein (253aa)
livG; branched-chain amino acid ABC ATPase component (EC:3.6.3.-)
Branched-chain amino acid ABC ATPase component {ECO:0000313|EMBL:CCO05945.1}; EC=3.6.3.- {ECO:0000313|EMBL:CCO05945.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
ABC transporter ATP-binding protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T9Z9_9FIRM
L3_122_000M1_scaffold_586_10
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9385..10479)
DNA (1095bp) protein (365aa)
Branched-chain amino acid ABC transporter permease protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SZE0_9FIRM
livM; branched-chain amino acid ABC transporter membrane component
Branched-chain amino acid ABC transporter membrane component {ECO:0000313|EMBL:CCO05944.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_122_000M1_scaffold_586_11
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10548..11429)
DNA (882bp) protein (294aa)
Amino acid/amide ABC transporter membrane protein 1 HAAT family (TC 3.A.1.4.-) n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U6W4_9FIRM
livH; branched-chain amino acid ABC transporter membrane component
Branched-chain amino acid ABC transporter membrane component {ECO:0000313|EMBL:CCO05943.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_122_000M1_scaffold_586_12
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11649..12851)
DNA (1203bp) protein (401aa)
Receptor family ligand-binding protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TF77_9FIRM
Receptor family ligand-binding protein {ECO:0000313|EMBL:CDC66501.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
livK; branched-chain amino acid extracellular binding protein
L3_122_000M1_scaffold_586_13
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13165..13407
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T2U7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC66500.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein predicted by Glimmer/Critica
L3_122_000M1_scaffold_586_14
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13391..13654
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T9Y8_9FIRM
cotJB; Spore coat protein JB
Spore coat protein JB {ECO:0000313|EMBL:CCO05940.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_122_000M1_scaffold_586_15
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13654..14250
DNA (597bp) protein (199aa)
CotJC protein n=1 Tax=Ruminococcus albus 8 RepID=E9SGX0_RUMAL
cotJC; Spore coat protein JC
Spore coat protein JC {ECO:0000313|EMBL:CCO05939.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_122_000M1_scaffold_586_16
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14297..14974)
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TEP7_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO05938.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_122_000M1_scaffold_586_17
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15324..15500
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T2A5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC66340.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L3_122_000M1_scaffold_586_18
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15540..16175)
DNA (636bp) protein (212aa)
Sortase family protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T9E7_9FIRM
Sortase family protein {ECO:0000313|EMBL:CDC66339.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
sortase family protein, putative
L3_122_000M1_scaffold_586_19
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16220..17200)
DNA (981bp) protein (327aa)
LPXTG-motif cell wall anchor domain protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SYS3_9FIRM
LPXTG-motif cell wall anchor domain protein {ECO:0000313|EMBL:CDC66338.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein
L3_122_000M1_scaffold_586_20
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17190..18113)
DNA (924bp) protein (308aa)
Sortase family protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U661_9FIRM
srtA; Sortase family protein
Sortase family protein {ECO:0000313|EMBL:CCO05935.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_122_000M1_scaffold_586_21
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18177..19763)
DNA (1587bp) protein (529aa)
Cna protein B-type domain protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TEP1_9FIRM
Cna protein B-type domain protein {ECO:0000313|EMBL:CDC66336.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein
L3_122_000M1_scaffold_586_22
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19792..25542)
DNA (5751bp) protein (1917aa)
LPXTG-motif cell wall anchor domain protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T2A0_9FIRM
LPXTG-motif cell wall anchor domain protein {ECO:0000313|EMBL:CDC66335.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein
L3_122_000M1_scaffold_586_23
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25587..26189)
DNA (603bp) protein (201aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
sip3; Signal peptidase I (EC:3.4.21.89)
Signal peptidase I n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T9E3_9FIRM
L3_122_000M1_scaffold_586_24
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26176..26412)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SYR6_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO05931.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_122_000M1_scaffold_586_25
unknown

Not on your lists

comp(26508..26780)
DNA (273bp) protein (91aa)

This feature has no annotations

L3_122_000M1_scaffold_586_26
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26930..27124)
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U655_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO05930.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_122_000M1_scaffold_586_27
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27134..27577)
DNA (444bp) protein (148aa)
Transcriptional regulator MarR family n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TEN6_9FIRM
Transcriptional regulator, MarR family
Transcriptional regulator MarR family {ECO:0000313|EMBL:CDC66331.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L3_122_000M1_scaffold_586_28
Streptococcus sp. HSISS1, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(27710..29305)
DNA (1596bp) protein (532aa)
Putative, predicted membrane protein(TMS9) n=2 Tax=Streptococcus RepID=T0TA41_9STRE
Putative, predicted membrane protein(TMS9) {ECO:0000313|EMBL:EQC68071.1}; TaxID=1316410 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus sp. HSISS1.;"
transporter
L3_122_000M1_scaffold_586_29
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29523..29804
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T294_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC66330.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein predicted by Glimmer/Critica
L3_122_000M1_scaffold_586_30
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29973..32117
DNA (2145bp) protein (715aa)
Polyphosphate kinase {ECO:0000256|RuleBase:RU003800, ECO:0000256|SAAS:SAAS00008191}; EC=2.7.4.1 {ECO:0000256|RuleBase:RU003800, ECO:0000256|SAAS:SAAS00008191};; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
ppk2; K00937 polyphosphate kinase (EC:2.7.4.1)
Polyphosphate kinase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T9E0_9FIRM
Displaying items 1-30 of 38 in total

View Taxonomy